| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,907,508 | T→A | 6.1% | K351N (AAA→AAT) | glmU ← | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,907,508 | 0 | T | A | 6.1% | 1110.0 / 45.8 | 325 | K351N (AAA→AAT) | glmU | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase |
| Reads supporting (aligned to +/- strand): ref base T (149/156); new base A (9/11); total (158/167) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.62e-01 | |||||||||||
Only 100 of 340 total aligned reads displayed.
ACATCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCAC > CP009273/3907359‑3907657 | acaTCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCtttt < 2:1018955/150‑1 (MQ=255)acaTCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCtttt > 1:1723868/1‑150 (MQ=255)acaTCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCtttt > 1:2817523/1‑150 (MQ=255)acaTCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCtttt > 1:2854522/1‑150 (MQ=255) aTCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCtttttt < 2:3301974/150‑1 (MQ=255) tcgtcgCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTc > 1:571757/1‑150 (MQ=255) cgCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCAtct > 1:2939627/1‑150 (MQ=255) cGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCaa < 2:1725039/150‑1 (MQ=255) gATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGTCTTTACCCAGACGCGCTTTATTCATCTCAAc < 2:4039329/150‑1 (MQ=255) gATAATGGTCTTAAATTTAGTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAAc < 2:2244462/150‑1 (MQ=255) aaTGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGaa < 1:4609531/150‑1 (MQ=255) aaTGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGaa < 1:4535258/150‑1 (MQ=255) gTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGGTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTa < 2:1799939/150‑1 (MQ=255) cTTAAATTTATTCGCACCATCGTAGTTGCATGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTAcc < 2:3083335/150‑1 (MQ=255) ttAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCg < 2:2042524/150‑1 (MQ=255) tAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGa < 2:3038755/150‑1 (MQ=255) ttATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGa < 1:2383829/150‑1 (MQ=255) tATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg > 1:2131860/1‑150 (MQ=255) tATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAg < 1:4689221/150‑1 (MQ=255) cGCACCATCGTTGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCAcc < 2:1382355/150‑1 (MQ=255) gCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCt > 2:2498337/1‑150 (MQ=255) aCCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTc < 1:2778755/150‑1 (MQ=255) ccATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTcc < 1:436871/150‑1 (MQ=255) gTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa > 1:1959690/1‑150 (MQ=255) gTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa > 2:1108706/1‑150 (MQ=255) gTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCaa < 2:2338340/150‑1 (MQ=255) gTTGCAGGTAATGGTTCCCGCGCCGATGTTAACTTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc < 1:330662/150‑1 (MQ=255) gTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTc < 1:779618/150‑1 (MQ=255) tGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAg > 1:2278142/1‑150 (MQ=255) gCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGc > 1:1028252/1‑150 (MQ=255) tAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAg < 2:1242740/150‑1 (MQ=255) taTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg > 1:2003409/2‑150 (MQ=255) aaTGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAgg < 1:1865091/150‑1 (MQ=255) tGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGAc > 2:1940916/1‑150 (MQ=255) ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg < 1:4184369/150‑1 (MQ=255) ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg > 1:1468841/1‑150 (MQ=255) ggTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACg > 1:4952729/1‑150 (MQ=255) cccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaa > 1:940655/1‑150 (MQ=255) ccGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaac < 2:2704111/150‑1 (MQ=255) cgcgCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCACCGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacg < 1:3931209/150‑1 (MQ=255) cgcCGATGTTAACGTTATCGCCTATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGAGCTTTTTTCTTCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggg < 2:4739403/150‑1 (MQ=255) cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACgcaaacggg > 1:1911571/1‑150 (MQ=255) cgcCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacggg < 2:2190522/150‑1 (MQ=255) ccGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggca > 1:5049801/1‑150 (MQ=255) cGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaa > 2:1265070/1‑150 (MQ=255) tGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacg > 1:1321742/1‑150 (MQ=255) gTTAACTTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACgcaaacgggcaaacgg < 1:3342088/150‑1 (MQ=255) gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCCACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg < 1:2198358/150‑1 (MQ=255) gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg > 1:810885/1‑150 (MQ=255) gTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACgcaaacgggcaaacgg > 2:930071/1‑150 (MQ=255) ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGcaaacgggcaaacggg < 1:4926632/150‑1 (MQ=255) ttAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGcaaacgggcaaacggg < 1:1289877/150‑1 (MQ=255) aaCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTGTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAaacgggccaacgggcc > 2:3420525/1‑150 (MQ=255) aCGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCa < 1:707767/150‑1 (MQ=255) tCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTa < 2:2298417/150‑1 (MQ=255) gCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACa < 1:1205394/150‑1 (MQ=255) ccAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAg > 2:615483/1‑150 (MQ=255) aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCCACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGcc < 1:756482/150‑1 (MQ=255) aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGcc > 1:158181/1‑150 (MQ=255) aTTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGcc > 2:2136989/1‑150 (MQ=255) ccGCATCGCCCATGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTg < 1:3611031/150‑1 (MQ=255) ccGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTg < 2:4825233/150‑1 (MQ=255) ccGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTg < 1:2069026/150‑1 (MQ=255) ccGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTg < 1:3063610/150‑1 (MQ=255) cATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCa < 1:67978/150‑1 (MQ=255) tCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCCACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGa < 1:1361549/150‑1 (MQ=255) gcgcAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGAtt < 2:3656996/147‑1 (MQ=255) ggTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCAt < 2:120140/150‑1 (MQ=255) ggTAAGTCAGAGGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCAt < 2:4945193/150‑1 (MQ=255) gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCTGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATc < 1:1549379/150‑1 (MQ=255) gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATc < 2:4544611/150‑1 (MQ=255) gTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATc < 2:2855104/150‑1 (MQ=255) tAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCt > 2:4121817/1‑150 (MQ=255) aaGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCtt < 1:3991353/150‑1 (MQ=255) aGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTc < 2:4396839/150‑1 (MQ=255) aGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTc < 1:4431661/150‑1 (MQ=255) gTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTcc < 2:4583065/150‑1 (MQ=255) cAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCcac < 1:3777165/150‑1 (MQ=255) aGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCcaca < 1:3496683/150‑1 (MQ=255) gACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACgg > 2:985025/1‑150 (MQ=255) aCCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGt < 2:803445/150‑1 (MQ=255) aGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGtata > 1:2660286/1‑150 (MQ=255) cTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACg < 2:2579958/150‑1 (MQ=255) tttCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTCCAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACgg > 2:2835395/1‑150 (MQ=255) cGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACt > 2:2792162/1‑150 (MQ=255) gAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTg > 2:3582095/1‑150 (MQ=255) aCCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCa > 2:3267774/1‑150 (MQ=255) aCCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCa > 2:1639473/1‑150 (MQ=255) ccAGACGCGCTTTATTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAat > 2:4202161/1‑150 (MQ=255) cAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatc < 2:4987194/150‑1 (MQ=255) gACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcat > 1:4105401/1‑150 (MQ=255) aCGCGCTTTTTTCATCTCCACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc < 1:3426784/150‑1 (MQ=255) aCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc < 1:2490555/150‑1 (MQ=255) aCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc < 2:1355777/150‑1 (MQ=255) aCGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc > 2:2912174/1‑150 (MQ=255) aCGCGCTTTTTTCATCTCAAAGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAatcatc < 2:4686505/150‑1 (MQ=255) cgcTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGcc < 2:1903598/150‑1 (MQ=255) gcTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCa > 2:1568549/1‑150 (MQ=255) gcTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCa > 2:2375534/1‑150 (MQ=255) tttttCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATc < 1:862452/150‑1 (MQ=255) | ACATCGTCGCCGATAATGGTCTTAAATTTATTCGCACCATCGTAGTTGCAGGTAATGGTTCCCGCGCCGATGTTAACGTTATCGCCAATTTCCGCATCGCCCAGGTAAGTCAGATGACCAGCTTTCGAGCCTTTACCCAGACGCGCTTTTTTCATCTCAACGAAGTTACCGACGTGAGCACCTTCCAGCAACTCAGCACCAGGACGCAAACGGGCAAACGGGCCAATGGTACAGGCCGCTGCCAGATTCGCATCTTCCACAACGGTATACGGACTGATTTCGCAATCATCGCCAATCAC > CP009273/3907359‑3907657 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |