| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,915,091 | C→A | 10.1% | T107T (ACG→ACT) | atpB ← | F0 sector of membrane‑bound ATP synthase, subunit a |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,915,091 | 0 | C | A | 10.1% | 1252.4 / 76.9 | 346 | T107T (ACG→ACT) | atpB | F0 sector of membrane‑bound ATP synthase, subunit a |
| Reads supporting (aligned to +/- strand): ref base C (168/143); new base A (20/15); total (188/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 348 total aligned reads displayed.
ACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAA > CP009273/3914942‑3915239 | cGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCg < 2:2025318/150‑1 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCa > 1:4824156/1‑150 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCa < 2:1610813/150‑1 (MQ=255) ccAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCa < 2:2251802/150‑1 (MQ=255) cAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAg > 1:1077818/1‑150 (MQ=255) aGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAgg > 1:4515276/1‑150 (MQ=255) aGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGAGCAGGCAGACCCAGTACATGTTCAGCAAGGTACGGCAGCAGGTCGATAGGCAGAAAATCCATCAGGTGCATCAGGAATACCCAGACGAAGATCGTCAgg > 2:268024/1‑150 (MQ=255) ttccATAGACAGCGTTACGTTCACGTCCGCAGACTGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAgggg < 2:1408358/148‑2 (MQ=255) tGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACAACACGCAGTGCAGGCAGACCCAGTACATGTACAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGc > 2:1534968/1‑150 (MQ=255) aTAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGc > 1:3926726/1‑150 (MQ=255) aTAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGc < 2:1230138/150‑1 (MQ=255) tAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCg < 2:2745262/150‑1 (MQ=255) gACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGa < 1:4148176/150‑1 (MQ=255) aCAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAg < 2:3689716/150‑1 (MQ=255) aGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCa > 1:1677489/1‑150 (MQ=255) cGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAAt > 2:2776255/1‑150 (MQ=255) gTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATc < 1:2948998/150‑1 (MQ=255) gTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATc > 2:3343513/1‑150 (MQ=255) cGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCttt > 1:1782313/1‑150 (MQ=255) gTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCtttt > 1:4903391/1‑150 (MQ=255) ccGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGc > 1:5099596/1‑150 (MQ=255) gCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCa < 2:4321005/150‑1 (MQ=255) cAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCAt < 2:4529688/150‑1 (MQ=255) gACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATgg > 2:4230220/1‑150 (MQ=255) ggAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTAc < 2:1878923/150‑1 (MQ=255) ccACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGt > 2:1584579/1‑150 (MQ=255) ccACACGCAGGGCAGGCAGACCCAGTACCGGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGGTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGt < 1:3310276/150‑1 (MQ=255) cacGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCtt < 2:4266242/150‑1 (MQ=255) acGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCttt < 2:3481064/150‑1 (MQ=255) cGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTc < 2:4745819/150‑1 (MQ=255) cGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTc > 1:1318052/1‑150 (MQ=255) aGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACg > 1:4355542/1‑150 (MQ=255) aGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACg > 1:826127/1‑150 (MQ=255) tGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCt < 1:4179267/150‑1 (MQ=255) gcaggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTa < 1:4311119/150‑1 (MQ=255) caggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCtttt < 1:208165/124‑1 (MQ=255) caggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCtttt > 2:208165/1‑124 (MQ=255) caggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTAc > 1:2578031/1‑150 (MQ=255) aggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTAcc > 1:3665678/1‑150 (MQ=255) aggcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTAcc < 2:2174052/150‑1 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCAt < 2:2380160/150‑1 (MQ=255) gcagACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCAt < 2:3985819/150‑1 (MQ=255) agACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTa > 1:864341/1‑150 (MQ=255) agACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTa > 1:670209/1‑150 (MQ=255) gTACCTGTTCATCAATGTACGGCAGCATGTCGATAGGCATTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGc < 1:1835648/150‑1 (MQ=255) tACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGcc > 2:4302224/1‑150 (MQ=255) aCATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGTCg < 2:1137476/150‑1 (MQ=255) aCATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCg > 2:4055052/1‑150 (MQ=255) tGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATc > 1:2825965/1‑150 (MQ=255) gTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCa > 1:4601474/1‑150 (MQ=255) ttCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCAc < 2:2280703/150‑1 (MQ=255) aGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAg > 2:2957675/1‑150 (MQ=255) gCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGc < 1:3505346/150‑1 (MQ=255) cAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCt > 1:445396/1‑150 (MQ=255) aaTGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTc < 2:844382/150‑1 (MQ=255) tGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGCGCACTCAGCTTGCTTTTGCCATGGTACAGGTCTGTCACGCTACCAGTAACAAAGCCGATCACCAGCTcca > 2:2503829/1‑148 (MQ=255) tGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCaa > 1:1014705/1‑150 (MQ=255) gTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAAt < 1:3337835/150‑1 (MQ=255) gTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAAt < 2:1997603/150‑1 (MQ=255) tACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATc > 2:5028882/1‑150 (MQ=255) aCGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcg > 2:801661/1‑150 (MQ=255) aCGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcg < 2:4115840/150‑1 (MQ=255) ggCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATcgcg < 2:1327188/150‑1 (MQ=255) gcagcaGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCgg > 2:3484460/1‑150 (MQ=255) gcagcaGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCgg > 2:909537/1‑150 (MQ=255) cagcagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGt > 2:2710801/1‑150 (MQ=255) agcagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTc > 1:3089504/1‑150 (MQ=255) cagGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTg < 2:442068/150‑1 (MQ=255) agGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGACAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACCTGTCTTTCACGCTACCAGTAACAAAGCCGATCACCAGCTCAAACGCGGTCTGa > 2:3277725/1‑150 (MQ=255) ggTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGaa < 2:2324702/150‑1 (MQ=255) gTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGaaa > 2:4249050/1‑150 (MQ=255) tCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAAc > 1:4725756/1‑150 (MQ=255) gATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACtt > 2:483470/1‑150 (MQ=255) ggCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCt < 1:523550/150‑1 (MQ=255) ggCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCt > 2:589034/1‑150 (MQ=255) gCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTg < 1:2202941/150‑1 (MQ=255) gTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGca < 1:707044/150‑1 (MQ=255) gTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGca < 1:1630162/150‑1 (MQ=255) gTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGca < 2:1677485/150‑1 (MQ=255) tAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGcac > 2:3143940/1‑150 (MQ=255) tAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGcac > 2:3421526/1‑150 (MQ=255) ccATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGACACTTACCTGGCACACCGc > 1:4070958/1‑150 (MQ=255) cAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGt > 2:939942/1‑150 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc < 2:3544941/150‑1 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc < 1:2317838/150‑1 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc < 1:3892626/150‑1 (MQ=255) aGGTTCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTc < 1:3497089/150‑1 (MQ=255) ttCATCAGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGcc > 2:1457730/1‑150 (MQ=255) catcaGGAATACCCAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCtt > 1:3842986/1‑150 (MQ=255) atcaGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCTATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCttt > 2:4665266/1‑150 (MQ=255) aGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTg < 2:2876799/150‑1 (MQ=255) aGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTg < 1:3157813/150‑1 (MQ=255) aaTACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGTTCGCCTTTATGgct > 1:2348392/1‑150 (MQ=255) cAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgcta < 1:2717/150‑1 (MQ=255) cAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgcta > 2:746030/1‑150 (MQ=255) cAGACGAAGATAGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgcta > 1:4990734/1‑150 (MQ=255) aGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGgctacgctac < 2:3571749/150‑1 (MQ=255) gACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTGTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGctacgctacg < 2:173437/150‑1 (MQ=255) aaGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAAt > 1:4289963/1‑150 (MQ=255) aGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATa < 2:2137827/150‑1 (MQ=255) | ACGCCCAGTGCCATAGACAGCGTTACGTTCACGTCCGCAGACGGAACCACACGCAGTGCAGGCAGACCCAGTACATGTTCAGCAATGTACGGCAGCAGGTCGATAGGCAGTAAATCCATCAGGTTCATCAGGAATACCCAGACGAAGATCGTCAGGGCCAGCGGAGCAATCAGCTTGCTTTTGCCATGGTACATGTCTTTCACGCTACCATTAACAAAGCCGATCACCAGCTCAATCGCGGTCTGAAACTTACCTGGCACACCGCTGGTCGCCTTTTTGGCTACGCTACGGAATAAAA > CP009273/3914942‑3915239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |