| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,948,349 | C→A | 6.1% | L504L (CTC→CTA) | ilvD → | dihydroxyacid dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,948,349 | 0 | C | A | 6.1% | 1481.6 / 42.0 | 375 | L504L (CTC→CTA) | ilvD | dihydroxyacid dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (171/180); new base A (11/13); total (182/193) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 379 total aligned reads displayed.
TACGAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATCCCGAACCG > CP009273/3948200‑3948498 | cGAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCgg < 2:175515/150‑1 (MQ=255) gAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGc > 1:4894131/1‑150 (MQ=255) aaaGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCa > 2:4621390/1‑150 (MQ=255) aaaGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCa < 1:4495008/150‑1 (MQ=255) aaGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCaa < 2:4972253/150‑1 (MQ=255) aaGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTAGGCaa > 2:530539/1‑150 (MQ=255) gCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAg > 1:91990/1‑150 (MQ=255) ccAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGc > 1:4279911/1‑150 (MQ=255) aGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCt < 1:1920186/150‑1 (MQ=255) cGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTAGGCAAAGCCTGTgc < 2:2320895/150‑1 (MQ=255) gATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTTTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTgcg > 2:864287/1‑150 (MQ=255) gATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTgcg > 2:2905517/1‑150 (MQ=255) aTGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTgcgc > 1:3590490/1‑150 (MQ=255) tGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCt < 1:1048428/150‑1 (MQ=255) aGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCAc < 2:2941804/150‑1 (MQ=255) gAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCAcc < 2:3860866/150‑1 (MQ=255) aGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGa < 1:991324/150‑1 (MQ=255) aGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGa > 1:3154636/1‑150 (MQ=255) cGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACg < 2:1057974/150‑1 (MQ=255) cGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACg > 2:1524796/1‑150 (MQ=255) cGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACg < 2:2752142/150‑1 (MQ=255) gATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACgg > 2:473489/1‑150 (MQ=255) ttCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATTCGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTc < 1:467768/150‑1 (MQ=255) ttCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTc < 1:573804/150‑1 (MQ=255) ttCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTc < 2:1757594/150‑1 (MQ=255) ttCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTAGGCAAAGCCTGTGCGCTGATCACCGACGGTc < 1:3750269/150‑1 (MQ=255) tctcGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCg < 1:1003861/150‑1 (MQ=255) ctcGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGt > 1:1208978/1‑150 (MQ=255) tcGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGtt > 2:3014392/1‑150 (MQ=255) cggcggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGttt < 2:2038181/150‑1 (MQ=255) cggcggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGttt < 2:488014/150‑1 (MQ=255) ggcggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTtc > 1:3926398/1‑150 (MQ=255) ggcggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTtc > 2:4348911/1‑150 (MQ=255) ggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTctct < 2:3905860/150‑1 (MQ=255) ggTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTctct < 1:2172724/150‑1 (MQ=255) tAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCtgg > 1:2717359/1‑150 (MQ=255) aaaGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCtggt < 1:1533182/150‑1 (MQ=255) aGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCtggtgg > 2:5048582/1‑150 (MQ=255) tCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACct > 1:403801/1‑150 (MQ=255) tCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTAGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACct > 2:3232310/1‑150 (MQ=255) ccGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTg < 1:1581726/150‑1 (MQ=255) ccGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTg < 2:91990/150‑1 (MQ=255) cGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTgg < 1:2366065/150‑1 (MQ=255) tgGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCa > 1:1367813/1‑150 (MQ=255) tgGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGCTTCTCTGGTGGCACCTCTGGTCTTTCCa < 1:3809905/150‑1 (MQ=255) ggTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCAt < 1:2732051/150‑1 (MQ=255) ggTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCAt < 2:2511084/150‑1 (MQ=255) ggTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTAGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCAt > 1:2328678/1‑150 (MQ=255) tagtaATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCg > 2:437836/1‑150 (MQ=255) tagtaATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCg < 2:1597141/150‑1 (MQ=255) gtaATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGc < 1:4703546/150‑1 (MQ=255) gtaATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGc > 1:2946216/1‑150 (MQ=255) taATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGcc < 1:2298436/150‑1 (MQ=255) taATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGcc > 1:1281353/1‑150 (MQ=255) aaTTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCa < 2:4538293/150‑1 (MQ=255) aaTTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCa < 2:1931734/150‑1 (MQ=255) ttCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACg > 2:3447158/1‑150 (MQ=255) cTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGtctc < 2:2496064/150‑1 (MQ=255) tATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCa < 2:39157/150‑1 (MQ=255) gAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTTCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCg < 1:4407427/150‑1 (MQ=255) gAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCg > 1:69106/1‑150 (MQ=255) ggCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaa > 2:4392906/1‑150 (MQ=255) gCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaag < 1:3518984/150‑1 (MQ=255) gAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggc > 1:2987826/1‑150 (MQ=255) aaGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaa < 1:1136377/150‑1 (MQ=255) aaGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaa > 1:2852262/1‑150 (MQ=255) ggCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagc > 1:848540/1‑150 (MQ=255) ggCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagc < 1:4859936/150‑1 (MQ=255) cGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagcgg < 2:2658313/150‑1 (MQ=255) cGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagcgg > 1:1476482/1‑150 (MQ=255) cGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagcgg > 1:743401/1‑150 (MQ=255) ggTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGaagcggcaagcggc > 2:726658/1‑150 (MQ=255) gTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAgcggcg > 2:1197827/1‑150 (MQ=255) tCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGcggcgg < 1:5059538/150‑1 (MQ=255) tCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGcggcgg > 2:4200252/1‑150 (MQ=255) ccGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCggcggc < 2:1828460/150‑1 (MQ=255) ccGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCggcggc < 2:5030087/150‑1 (MQ=255) ggggATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGgcag > 1:3342300/1‑150 (MQ=255) tGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTg > 1:1811975/1‑150 (MQ=255) tGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTg < 1:1618760/150‑1 (MQ=255) gCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTgg > 2:683976/1‑150 (MQ=255) cAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGc > 1:4524289/1‑150 (MQ=255) aGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGcc > 1:3744481/1‑150 (MQ=255) tGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTg < 1:3981760/150‑1 (MQ=255) tACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCACACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGAt > 1:54494/1‑150 (MQ=255) aCCCAACCAGCTTCCTGAAATCAAGGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTGTCGCGGGTGGCACCTCTGGTCTTTCCATCGGCCACGGCTCACCGGAAGCGGCCCGCGGCGGCCGCCGTGGCCGGAGTGCAgcgg > 2:4331077/1‑147 (MQ=255) ccAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGt > 2:3508050/1‑150 (MQ=255) aCCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGAc < 1:423552/150‑1 (MQ=255) ccAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGAcc > 2:1485822/1‑150 (MQ=255) cAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCt > 2:2209979/1‑150 (MQ=255) aGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCACGCGGCGGCAGCATTGGCCTGAGTGACGATGGTGACCTg > 2:3120354/1‑150 (MQ=255) aGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTg > 2:3771078/1‑150 (MQ=255) aGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTg > 2:2229804/1‑150 (MQ=255) cTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGAt < 2:63219/150‑1 (MQ=255) tCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCAGTGGCCTGATTGAAGATGGTGACCTGATCg > 2:3696038/1‑150 (MQ=255) cTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCt < 2:1367813/150‑1 (MQ=255) tGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCAGTGGCCTGATTGAAGATGGTGACCTGATCGCTa > 2:1251738/1‑150 (MQ=255) aaTGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACAt < 1:2594534/150‑1 (MQ=255) tGGGTCTAGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATcc < 1:3162685/150‑1 (MQ=255) ggTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATCCCg < 1:5048334/150‑1 (MQ=255) | TACGAAAGCCAGGACGATGCGGTAGAAGCGATTCTCGGCGGTAAAGTTGTCGCCGGAGATGTGGTAGTAATTCGCTATGAAGGCCCGAAAGGCGGTCCGGGGATGCAGGAAATGCTCTACCCAACCAGCTTCCTGAAATCAATGGGTCTCGGCAAAGCCTGTGCGCTGATCACCGACGGTCGTTTCTCTGGTGGCACCTCTGGTCTTTCCATCGGCCACGTCTCACCGGAAGCGGCAAGCGGCGGCAGCATTGGCCTGATTGAAGATGGTGACCTGATCGCTATCGACATCCCGAACCG > CP009273/3948200‑3948498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |