| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 411,446 | C→T | 5.9% | Q321Q (CAG→CAA) | sbcD ← | exonuclease, dsDNA, ATP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 411,446 | 0 | C | T | 5.9% | 1135.2 / 39.4 | 305 | Q321Q (CAG→CAA) | sbcD | exonuclease, dsDNA, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (145/142); new base T (9/9); total (154/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 316 total aligned reads displayed.
GCCAGACGGCGATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTACGTT > CP009273/411297‑411595 | gCCAGACGGCGATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTgcgc > 2:3854286/1‑150 (MQ=255) aCGGCGATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAAAGCCTGGATTTTGCGTTGAat > 2:4939563/1‑150 (MQ=255) ggCGATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGTTGAatat > 2:5046132/1‑150 (MQ=255) gATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCAt < 2:2465231/150‑1 (MQ=255) gATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCAt > 2:22347/1‑150 (MQ=255) gATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCAt > 1:2530945/1‑150 (MQ=255) acacCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGAt < 2:1565159/150‑1 (MQ=255) cacCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATa > 2:4702600/1‑150 (MQ=255) acCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGTTGAATATCATGCAGATAc < 2:1727875/150‑1 (MQ=255) ccTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACt < 1:3015354/150‑1 (MQ=255) tctTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACtca > 2:4022222/1‑150 (MQ=255) ctTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACtcat > 2:3213873/1‑150 (MQ=255) ttCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACtcatc < 1:1355630/150‑1 (MQ=255) gACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCagt > 1:4797220/1‑150 (MQ=255) gACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCagt > 2:3491710/1‑150 (MQ=255) aCGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCagta < 2:4279381/150‑1 (MQ=255) gCTGAGTTCGCTGAGGTTTTCACGCTGTTGGCTGGCTAACACACGCTCTCGCAGTTCACTACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTATGCGCTGAATATAATGCAGATACTCATCagtagt > 2:149849/1‑150 (MQ=255) cTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTg < 2:1926161/150‑1 (MQ=255) cTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTg > 1:862661/1‑150 (MQ=255) ttCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTc < 1:2895575/150‑1 (MQ=255) ttCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTc < 1:365403/150‑1 (MQ=255) gCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGat > 2:2043366/1‑150 (MQ=255) tGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGatat < 1:2849636/150‑1 (MQ=255) tGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGatat > 1:3807553/1‑150 (MQ=255) gggTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATcca > 2:2968545/1‑150 (MQ=255) ttCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATccagcca > 2:1313442/1‑150 (MQ=255) ttCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATccagcca < 1:1018337/150‑1 (MQ=255) tGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGt < 1:1969386/150‑1 (MQ=255) gTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTg < 2:2878684/150‑1 (MQ=255) ggctggctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCt > 1:422100/1‑150 (MQ=255) ctggctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTcc < 1:5138695/150‑1 (MQ=255) tggctAACACTCTCTCGCGCTGTTCACGACTCCTACGTACCAGCAATACTTCGACAGTCAATGATTCGGTTAATGCCTGTATTTTGCTCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCt < 2:3295067/150‑1 (MQ=255) tggctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCt < 2:659776/150‑1 (MQ=255) tggctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCt < 2:2257136/150‑1 (MQ=255) ggctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTg < 1:1108051/150‑1 (MQ=255) gctAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGc < 1:3213873/150‑1 (MQ=255) aaCACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGAt > 1:4372822/1‑150 (MQ=255) aaCACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGAt > 1:1820306/1‑150 (MQ=255) cacacGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATAc > 2:4831841/1‑150 (MQ=255) acacGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACa > 1:3750601/1‑150 (MQ=255) acGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATc < 1:4938586/150‑1 (MQ=255) acGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATc > 2:476833/1‑150 (MQ=255) cTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATcgcg > 2:4599024/1‑150 (MQ=255) cgcgCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGcc > 2:81863/1‑150 (MQ=255) cgcgCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGcc < 2:3368793/150‑1 (MQ=255) cgcgCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGcc < 1:1999364/150‑1 (MQ=255) gcgcTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCa < 1:4991230/150‑1 (MQ=255) gcgcTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCa < 1:3962093/150‑1 (MQ=255) gcTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACt < 2:740506/150‑1 (MQ=255) gcTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACt > 2:1000910/1‑150 (MQ=255) cTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTg > 2:4537092/1‑150 (MQ=255) tGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGt > 1:1450268/1‑150 (MQ=255) gTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGtt > 2:2533433/1‑150 (MQ=255) gTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGtt > 2:4368068/1‑150 (MQ=255) aCGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAg > 1:4041268/1‑150 (MQ=255) gACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCt > 2:3134002/1‑150 (MQ=255) gACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCt < 1:3413847/150‑1 (MQ=255) aCTCCGACGTACCAGCAATACTTCGTCAGGCTATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCTGATACTCATCTGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGAGATACATCGCGCCACTGTTACAGCtg < 1:4492881/150‑1 (MQ=255) tCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCtgtg > 1:3358426/1‑150 (MQ=255) ccGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGc < 2:4250466/150‑1 (MQ=255) aCGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGt > 1:948883/1‑150 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc > 1:2408165/1‑150 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc < 2:3707278/150‑1 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc < 2:2357944/150‑1 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc > 2:3620699/1‑150 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc > 2:1377318/1‑150 (MQ=255) aCCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATc > 1:3501749/1‑150 (MQ=255) ccAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCg > 1:3101058/1‑150 (MQ=255) aGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGAc < 2:2254518/150‑1 (MQ=255) gCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACg > 2:51655/1‑150 (MQ=255) aTACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCCGACAGGTGGCTCCTGCGCTCCATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCa > 2:391840/1‑150 (MQ=255) aTACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCa > 1:614102/1‑150 (MQ=255) gACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGcc > 2:4175938/1‑150 (MQ=255) aCAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCt < 2:1217799/150‑1 (MQ=255) aCAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCt < 1:3652435/150‑1 (MQ=255) cAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCtt > 2:882493/1‑150 (MQ=255) cAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCtt < 2:311517/150‑1 (MQ=255) aaTGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGc > 1:4559725/1‑150 (MQ=255) aaTGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGc > 1:1513242/1‑150 (MQ=255) tGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCAc < 2:2434251/150‑1 (MQ=255) gATTCGGTTAATGCCTGGATTTTGCTCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGAAATCCAGCCAGACAGGTGGCTCCTGCGATACATAGCGCCACTGTTCCAGCTGAGCGGTAATCGACGCCAGATCGCCTTTCAGCACt > 1:848148/1‑150 (MQ=255) tCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGcc < 2:2300425/150‑1 (MQ=255) tCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGcc < 1:4581411/150‑1 (MQ=255) ggTTAATGCCTGGATTTTGCGTTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCAt > 2:2759597/1‑150 (MQ=255) ggTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCAt < 1:761963/150‑1 (MQ=255) aTGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGGTATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGtt < 1:3622002/150‑1 (MQ=255) aTGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGtt < 1:627716/150‑1 (MQ=255) aTGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGtt < 1:3707047/150‑1 (MQ=255) ccTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCg < 1:696610/150‑1 (MQ=255) tGGATTTTGCGTTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGtt > 2:1829545/1‑150 (MQ=255) tGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGtt < 2:2651066/150‑1 (MQ=255) tGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGtt > 1:1251949/1‑150 (MQ=255) ggATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTa > 1:2509930/1‑150 (MQ=255) gATTTTGCGTTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTAc < 1:2285298/150‑1 (MQ=255) aTTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTAcc < 1:2152633/150‑1 (MQ=255) ttGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGt < 2:3977324/150‑1 (MQ=255) tGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTa < 2:2585103/150‑1 (MQ=255) gcgcTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTAc > 1:2058981/1‑150 (MQ=255) gcgcTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATAGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTAc > 1:265396/1‑150 (MQ=255) gcTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTACGt < 1:1667785/150‑1 (MQ=255) | GCCAGACGGCGATTGAACACCTCTTCGACGCTGAGTTCGCTGAGGGTTTCACGCTGTTGGCTGGCTAACACACGCTCGCGCTGTTCACGACTCCGACGTACCAGCAATACTTCGACAGGCAATGATTCGGTTAATGCCTGGATTTTGCGCTGAATATCATGCAGATACTCATCAGTAGTGATTTCGATATCCAGCCAGACAGGTGGCTCCTGCGATACATCGCGCCACTGTTCCAGCTGTGCGGTAATCGACGCCAGATCGCCTTTCAGCACTGCCATGGGTTGCGTTACCGGTACGTT > CP009273/411297‑411595 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |