| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,405,747 | G→T | 12.7% | intergenic (+30/+87) | aidB → / ← yjfN | DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,405,747 | 0 | G | T | 12.7% | 1328.8 / 110.6 | 392 | intergenic (+30/+87) | aidB/yjfN | DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (170/171); new base T (26/25); total (196/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 400 total aligned reads displayed.
TCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAAT > CP009273/4405598‑4405896 | tctcCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGAGGCGACGCTGGTTTCg > 1:2456827/1‑150 (MQ=255) tcCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGAt < 1:1766590/150‑1 (MQ=255) gCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTaa > 1:4911475/1‑150 (MQ=255) ccAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAAc > 2:269966/1‑150 (MQ=255) cAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACt > 1:217280/1‑150 (MQ=255) tGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTaaa < 2:671765/150‑1 (MQ=255) tGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTaaa > 1:603383/1‑150 (MQ=255) ggCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAAt > 1:4667588/1‑150 (MQ=255) gcAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGaa > 1:3049718/1‑150 (MQ=255) gcAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGaa < 1:2602284/150‑1 (MQ=255) aGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAat > 1:2522336/1‑150 (MQ=255) gCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTTCGGTTGTCAGAGCAGATCCAGAATGATGTCTTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATTCGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAatag < 2:715389/150‑2 (MQ=255) tgtCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGaaa < 2:786554/150‑1 (MQ=255) tCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAt < 2:1639696/150‑1 (MQ=255) cAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAtt < 2:4443906/150‑1 (MQ=255) cAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAtt > 1:4559134/1‑150 (MQ=255) cAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAtt < 2:5125276/150‑1 (MQ=255) cAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAAtt < 2:3483362/150‑1 (MQ=255) aGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTg > 1:3891999/1‑150 (MQ=255) aGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTg < 2:1427279/150‑1 (MQ=255) tGTTAGATACGCGGGGCGGCGTAAGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTTACTAAATGAAATATGTGAAAATTGTAGGcc < 2:5148137/150‑1 (MQ=255) tGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGcc < 1:240763/150‑1 (MQ=255) tGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGCGAAAATTGTAGGcc < 1:909830/150‑1 (MQ=255) aTACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACaa < 1:5082719/150‑1 (MQ=255) tACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACTAg < 2:4644533/150‑1 (MQ=255) tACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAg > 1:4450884/1‑150 (MQ=255) aCGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg < 1:4790814/150‑1 (MQ=255) aCGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg > 1:1660792/1‑150 (MQ=255) cggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc < 1:3262469/150‑1 (MQ=255) cggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc < 2:2345899/150‑1 (MQ=255) cggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc < 1:2037228/150‑1 (MQ=255) cggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc > 2:3798601/1‑150 (MQ=255) ggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTACATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg > 2:1820746/1‑150 (MQ=255) ggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg < 2:962448/150‑1 (MQ=255) ggcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcg > 1:367340/1‑150 (MQ=255) gcggcgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgc < 1:4282643/150‑1 (MQ=255) cgTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg < 2:1987644/150‑1 (MQ=255) cGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATc > 1:811405/1‑150 (MQ=255) ggTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATcc > 1:730995/1‑150 (MQ=255) ggTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATcc < 2:2379811/150‑1 (MQ=255) gTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCg > 2:1051317/1‑150 (MQ=255) ttGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCgg < 1:1996597/150‑1 (MQ=255) gTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa < 1:506214/150‑1 (MQ=255) tCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAt < 1:2253302/150‑1 (MQ=255) agagCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg > 2:1495309/1‑150 (MQ=255) agagCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg > 2:1358205/1‑150 (MQ=255) gCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc < 2:368142/150‑1 (MQ=255) gCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc < 2:475932/150‑1 (MQ=255) gCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc < 1:2202795/150‑1 (MQ=255) aGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt > 1:4163398/1‑150 (MQ=255) aGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAt > 2:250121/1‑150 (MQ=255) aTCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt > 1:1568931/1‑150 (MQ=255) ccAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc < 2:313615/150‑1 (MQ=255) aGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg < 1:436418/150‑1 (MQ=255) gAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGt < 1:1192480/150‑1 (MQ=255) aTGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg > 1:4022568/1‑150 (MQ=255) aTGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg < 2:1200384/150‑1 (MQ=255) gATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt > 1:968669/1‑150 (MQ=255) ttGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACt > 1:3019741/1‑150 (MQ=255) tgctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTc < 1:3706746/150‑1 (MQ=255) gctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCa < 1:2864123/150‑1 (MQ=255) ctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCAt > 1:1165604/1‑150 (MQ=255) gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc > 2:1042989/1‑150 (MQ=255) gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc < 1:3290705/150‑1 (MQ=255) gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt < 2:283589/150‑1 (MQ=255) gggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCAt < 1:3596273/150‑1 (MQ=255) ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa > 2:1198282/1‑150 (MQ=255) ggCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATa > 2:947985/1‑150 (MQ=255) cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACa < 2:337918/150‑1 (MQ=255) gACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg > 1:1874347/1‑150 (MQ=255) gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc < 2:4522655/150‑1 (MQ=255) gggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc < 2:3089936/150‑1 (MQ=255) ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg > 1:2944079/1‑150 (MQ=255) gggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc > 2:916657/1‑150 (MQ=255) gAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt > 1:1237210/1‑150 (MQ=255) tgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg < 2:4951923/150‑1 (MQ=255) tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc < 1:1043079/150‑1 (MQ=255) tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGcc < 2:4353197/150‑1 (MQ=255) aaGCGTATACGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt < 1:1820309/150‑1 (MQ=255) aaGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt > 1:3166308/1‑150 (MQ=255) cGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt > 1:3839145/1‑150 (MQ=255) cGTATACGACTGATGCGACGCTGGTTTCTATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTAt > 1:4853611/1‑150 (MQ=255) gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc < 2:1333558/150‑1 (MQ=255) gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATc < 2:4200776/150‑1 (MQ=255) tataCGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa < 1:1420650/150‑1 (MQ=255) tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCa > 1:3624536/1‑150 (MQ=255) ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAg < 1:2775885/150‑1 (MQ=255) cGACTGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct < 2:2124574/150‑1 (MQ=255) cGACTGATGCGACGCTGGGTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgct < 1:2081264/150‑1 (MQ=255) cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct < 2:4667588/150‑1 (MQ=255) tGATGCTACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGctgctg > 2:3338682/1‑150 (MQ=255) tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGctgctg > 2:2882250/1‑150 (MQ=255) aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg < 2:177584/150‑1 (MQ=255) aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGAATTGTTCATTTGCTGTAGATGACACTCATGCATACATTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg < 1:562414/150‑1 (MQ=255) cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTAc > 1:3202797/1‑150 (MQ=255) cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTAc < 2:217280/150‑1 (MQ=255) tttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATgg < 1:3430699/150‑1 (MQ=255) ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt > 2:5028705/1‑150 (MQ=255) ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt > 2:4824370/1‑150 (MQ=255) gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaat > 2:4057669/1‑150 (MQ=255) | TCTCCGCCAATGGCGCAGGCGTGGTGTCAGGTGATGTTAGATACGCGCGGCGGCGTACGGTTGTCAGAGCAGATCCAGAATGATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAAT > CP009273/4405598‑4405896 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |