| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,411,867 | G→T | 5.7% | E115* (GAA→TAA) | ulaC → | L‑ascorbate‑specific enzyme IIA component of PTS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,411,867 | 0 | G | T | 5.7% | 1327.3 / 33.3 | 331 | E115* (GAA→TAA) | ulaC | L‑ascorbate‑specific enzyme IIA component of PTS |
| Reads supporting (aligned to +/- strand): ref base G (160/152); new base T (11/8); total (171/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 338 total aligned reads displayed.
CAATGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATGTCATTACCGAT > CP009273/4411718‑4412016 | cAATGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAgg < 2:2490090/150‑1 (MQ=255) aTGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGTaa < 1:4590650/150‑1 (MQ=255) gCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGt < 1:4779440/150‑1 (MQ=255) gCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTggg < 1:4516551/150‑1 (MQ=255) cACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGc < 2:2897609/150‑1 (MQ=255) cGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGcat < 2:4164207/150‑1 (MQ=255) cGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGGTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGcat < 2:4533712/150‑1 (MQ=255) gTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGc > 1:1244156/1‑150 (MQ=255) tCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCa < 2:2453773/150‑1 (MQ=255) ggAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGAt < 1:1358364/150‑1 (MQ=255) gAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATc > 2:3068212/1‑150 (MQ=255) gAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATc > 1:3455775/1‑150 (MQ=255) gAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATc > 2:3108074/1‑150 (MQ=255) aaGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCg > 1:3859796/1‑150 (MQ=255) agGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCa < 2:2945993/150‑1 (MQ=255) gCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAAcc > 1:4030470/1‑150 (MQ=255) cGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCt > 2:1443231/1‑150 (MQ=255) cGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCt < 1:1095130/150‑1 (MQ=255) ttAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGt > 2:2234520/1‑150 (MQ=255) tAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGtt > 1:4078111/1‑150 (MQ=255) aaaaCCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTtgaa > 2:2067211/1‑150 (MQ=255) aaaaCCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGAGGGCATCATGCAGATCGTCAACCTGTTtgaa > 2:3356915/1‑150 (MQ=255) aaaCCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTtgaag < 1:2850746/150‑1 (MQ=255) aaaCCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTtgaag > 2:2916040/1‑150 (MQ=255) aaaCCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTtgaag < 2:684938/150‑1 (MQ=255) tttCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTtgaagatgaaga > 2:3515208/1‑150 (MQ=255) ctctctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGaa > 1:1801803/1‑150 (MQ=255) ctctctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGaa < 1:2654410/150‑1 (MQ=255) ctctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAAtt < 1:4387168/150‑1 (MQ=255) ctctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAAtt > 1:1552350/1‑150 (MQ=255) tctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAAttt > 2:483367/1‑150 (MQ=255) tctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAAttt < 2:3837499/150‑1 (MQ=255) ctGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAAtttt > 2:5130091/1‑150 (MQ=255) tGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTg > 1:3054540/1‑150 (MQ=255) tAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGAcc < 1:109775/150‑1 (MQ=255) aaCGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCg > 1:2285816/1‑150 (MQ=255) aCGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGt > 2:1355059/1‑150 (MQ=255) cGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGtt > 1:3499504/1‑150 (MQ=255) cGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGtt > 1:491420/1‑150 (MQ=255) gCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGttt < 1:1702193/150‑1 (MQ=255) gCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGttt < 1:3581552/150‑1 (MQ=255) gAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTAcg < 1:4931378/150‑1 (MQ=255) aaaaaGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTAcgc < 1:2144020/150‑1 (MQ=255) aaaaaGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTAcgc < 1:3355133/150‑1 (MQ=255) aaaaGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTAcgcg < 2:4996596/150‑1 (MQ=255) aaGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGcc > 1:2858336/1‑150 (MQ=255) aGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCt > 2:2359220/1‑150 (MQ=255) ncTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCg > 1:2561293/2‑150 (MQ=255) gCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCg > 1:5103555/1‑150 (MQ=255) cTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGt < 2:763104/150‑1 (MQ=255) ggAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTAc > 1:1915948/1‑150 (MQ=255) gAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTAcc > 1:2597356/1‑150 (MQ=255) aGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCg > 2:868748/1‑150 (MQ=255) gTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGa < 2:3611482/150‑1 (MQ=255) ttCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAg > 2:1533386/1‑150 (MQ=255) cAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACGTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCa > 1:2018815/1‑150 (MQ=255) cAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCa > 2:3212750/1‑150 (MQ=255) cAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCa > 1:4157157/1‑150 (MQ=255) aaCCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTATGACCGTTTACGCGCCTGCCGAACCGAGCAg > 1:4722128/1‑150 (MQ=255) aCCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAgg > 1:2131852/1‑150 (MQ=255) ccACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGa < 2:1204219/150‑1 (MQ=255) ccACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGa > 1:4842627/1‑150 (MQ=255) cGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGt < 1:97543/150‑1 (MQ=255) aTGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTAc > 2:1613066/1‑150 (MQ=255) tGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACt > 2:55518/1‑150 (MQ=255) aaCGATCCGGTGGATATCCTCATAACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGAt > 2:3748747/1‑150 (MQ=255) gATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGAtctc < 1:197523/150‑1 (MQ=255) gATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGAtctc > 1:4219976/1‑150 (MQ=255) aTCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCa > 1:2898189/1‑150 (MQ=255) gTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGTAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGAc > 2:3445071/1‑150 (MQ=255) ggATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCg < 2:3162949/150‑1 (MQ=255) atatCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCa > 2:4009447/1‑150 (MQ=255) tatCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGTAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCAc < 1:2186544/150‑1 (MQ=255) tatCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCAc > 2:635440/1‑150 (MQ=255) atCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCAcc > 2:4213746/1‑150 (MQ=255) atCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCAcc > 2:1708220/1‑150 (MQ=255) atCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCAcc > 1:4902863/1‑150 (MQ=255) tcatcaCCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAAcg < 2:2601151/150‑1 (MQ=255) catcaCCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAAcgc < 1:633178/150‑1 (MQ=255) catcaCCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAAcgc < 1:3212750/150‑1 (MQ=255) ggcggcGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTa < 1:1134237/150‑1 (MQ=255) ggcggcGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTa < 1:761246/150‑1 (MQ=255) ggcggTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTaaga > 2:1941507/1‑150 (MQ=255) ggTCGATGCCAATACTCACCAGTAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAgg > 1:1215441/1‑150 (MQ=255) ggTCGATGCCAATACTCACCAGTAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAgg > 1:2807567/1‑150 (MQ=255) ggTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAgg > 2:4682723/1‑150 (MQ=255) tCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGaa < 1:3983392/150‑1 (MQ=255) tCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGaa < 1:1815688/150‑1 (MQ=255) tCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGaa < 2:4722011/150‑1 (MQ=255) tCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGaa > 1:4524586/1‑150 (MQ=255) cGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTGGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTGAAGAAGGAAt > 2:3954215/1‑150 (MQ=255) gATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAAtt > 1:550798/1‑150 (MQ=255) aTGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTg < 2:2400856/150‑1 (MQ=255) aTGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTg < 1:4264318/150‑1 (MQ=255) cAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACa < 2:4251049/150‑1 (MQ=255) aTACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATg < 1:3072690/150‑1 (MQ=255) tCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATGTCAt > 2:2877537/1‑150 (MQ=255) cAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATGTCATTAcc > 2:1141240/1‑150 (MQ=255) aGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATGTCATTACCg > 2:2664891/1‑150 (MQ=255) ggAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCGTAAGAAGGAAGTGAACATGTCATTACCGa > 1:1330352/1‑150 (MQ=255) | CAATGCCGCACGGGCGTCCGGAAGAGGGCGTTAAGAAAACCGGTTTCTCTCTGGTAACGCTGAAAAAGCCGCTGGAGTTCAACCACGATGACAACGATCCGGTGGATATCCTCATCACCATGGCGGCGGTCGATGCCAATACTCACCAGGAAGTGGGCATCATGCAGATCGTCAACCTGTTTGAAGATGAAGAGAATTTTGACCGTTTACGCGCCTGCCGTACCGAGCAGGAAGTACTGGATCTCATTGACCGCACCAACGCGGCAGCTTAAGAAGGAATTGAACATGTCATTACCGAT > CP009273/4411718‑4412016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |