| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,461,317 | G→T | 6.1% | A299E (GCG→GAG) | pyrB ← | aspartate carbamoyltransferase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,461,317 | 0 | G | T | 6.1% | 1224.3 / 31.6 | 312 | A299E (GCG→GAG) | pyrB | aspartate carbamoyltransferase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base G (153/139); new base T (12/8); total (165/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.45e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 312 total aligned reads displayed.
GACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAG > CP009273/4461171‑4461465 | gACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCt < 1:3604040/150‑1 (MQ=255)gACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCt > 1:3806726/1‑150 (MQ=255)gACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCt < 2:3022852/150‑1 (MQ=255) tCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgc < 2:2223422/150‑1 (MQ=255) aaCAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcga < 2:697990/150‑1 (MQ=255) aCAGCTTAAAACCGAGCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcgag < 1:3904451/150‑1 (MQ=255) gCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcgagcga > 2:4387665/1‑150 (MQ=255) tAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGaaaa < 1:3097356/150‑1 (MQ=255) aaaaCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAAt > 2:1709734/1‑150 (MQ=255) aaCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATcc < 1:322815/150‑1 (MQ=255) aCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATccc < 2:1673467/150‑1 (MQ=255) gATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt < 2:2435147/150‑1 (MQ=255) aTCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtg > 2:4882742/1‑150 (MQ=255) tCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgc > 2:1809314/1‑150 (MQ=255) tGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcct > 2:3467516/1‑150 (MQ=255) cGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTgcctgcct > 1:729770/1‑150 (MQ=255) cGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTgcctgcct > 1:1395623/1‑150 (MQ=255) ggggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGcctgcctg > 2:1170882/1‑150 (MQ=255) gATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCctgctg < 2:636796/150‑1 (MQ=255) atatGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTgg > 1:2654493/1‑150 (MQ=255) atGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTACCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGaa < 1:1973139/150‑1 (MQ=255) tGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAg > 1:110190/1‑150 (MQ=255) ggTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGt < 1:4518489/150‑1 (MQ=255) ggTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGt > 1:3143554/1‑150 (MQ=255) gTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTa > 1:327400/1‑150 (MQ=255) cAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTAcc < 2:3773475/150‑1 (MQ=255) aaTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa < 1:4647646/150‑1 (MQ=255) aaTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa > 1:2203555/1‑150 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg > 2:2100957/1‑150 (MQ=255) ttACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCAGCCTGCTGGAAGTACCAgg > 2:2721165/1‑150 (MQ=255) cGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCgtg < 1:2175890/150‑1 (MQ=255) tGCCGCGTTTCATAGCTTCAACCTGCAAGTTATTATCGTGTGTCATCTCTATTTCCCCGGACAGGACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGtgtg < 2:3167126/150‑1 (MQ=255) ccGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGc > 1:1889224/1‑150 (MQ=255) ccGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGc < 2:2623623/150‑1 (MQ=255) gcgTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGt > 2:2306182/1‑150 (MQ=255) gTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGttt > 1:1522326/1‑150 (MQ=255) ttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTa > 2:4748005/1‑150 (MQ=255) tAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTAt < 1:4954548/150‑1 (MQ=255) tAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTAt < 2:3564231/150‑1 (MQ=255) aTAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCa > 1:4839188/1‑150 (MQ=255) aTAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCa < 2:4438915/150‑1 (MQ=255) tAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCaa < 1:2753437/150‑1 (MQ=255) gCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACa > 2:550230/1‑150 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTTACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt < 1:3373802/150‑1 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt > 2:291250/1‑150 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt > 2:291528/1‑150 (MQ=255) tCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATcc > 1:1162901/1‑150 (MQ=255) tCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATcc < 2:4956249/150‑1 (MQ=255) cAACCTGCAATTTATTATCTTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg > 2:2522215/1‑150 (MQ=255) cAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg > 2:4218654/1‑150 (MQ=255) cAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg < 1:2955889/150‑1 (MQ=255) cAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg < 1:2053572/150‑1 (MQ=255) aaCCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGt > 1:4723759/1‑150 (MQ=255) tGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCa < 2:3329751/150‑1 (MQ=255) tGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCa > 1:1823693/1‑150 (MQ=255) tGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCa < 2:3138467/150‑1 (MQ=255) tttATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAtctc > 1:4829415/1‑150 (MQ=255) tttATTATCGTGTGTCATCTCTATGTCCCCTTACAGGACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAtctc < 2:3930235/150‑1 (MQ=255) cGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAacac > 1:1006885/1‑150 (MQ=255) gtgtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcg < 2:1232698/150‑1 (MQ=255) gtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcgcg > 2:1549099/1‑150 (MQ=255) gtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcgcg > 2:4179982/1‑150 (MQ=255) tgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCgg < 1:4888362/150‑1 (MQ=255) tgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCgg > 1:2460634/1‑150 (MQ=255) tgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTGTTATCAACATCCGTCGCAATCTCATCAACACGCgg > 2:4102666/1‑150 (MQ=255) gtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGc > 2:878507/1‑150 (MQ=255) tCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCa < 1:1554128/150‑1 (MQ=255) tCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCa < 2:3704126/150‑1 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCg < 1:4714168/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGAt < 1:4264107/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCAGCTACACGCGGCAGCGGAt > 2:4068074/1‑150 (MQ=255) tATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATg < 2:749208/150‑1 (MQ=255) aTTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgc < 2:3239703/150‑1 (MQ=255) aTTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgc > 1:4020472/1‑150 (MQ=255) tCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcagc < 1:1246821/150‑1 (MQ=255) ccccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcagca > 2:2026304/1‑150 (MQ=255) ttACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACttt > 2:5092916/1‑150 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTc > 2:4663755/1‑150 (MQ=255) tACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATAtt > 1:2121521/1‑150 (MQ=255) tACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATAtt > 2:4557753/1‑150 (MQ=255) ccAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTgg > 1:998034/1‑150 (MQ=255) cAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGc > 1:4384607/1‑150 (MQ=255) gATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCtt < 1:873094/150‑1 (MQ=255) gATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTGTCATATTGGCtg > 2:67753/1‑149 (MQ=255) tCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTg < 1:618185/150‑1 (MQ=255) cgcgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg < 2:1944107/150‑1 (MQ=255) cgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCg < 2:2649983/150‑1 (MQ=255) cgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCg > 2:1246405/1‑150 (MQ=255) gATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 1:589386/1‑150 (MQ=255) gATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 2:4694363/1‑150 (MQ=255) gATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 1:2321349/1‑150 (MQ=255) gATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 1:1741675/1‑150 (MQ=255) tCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgt > 2:1993807/1‑150 (MQ=255) gAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGga < 1:2842908/150‑1 (MQ=255) gAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGga > 1:4912568/1‑150 (MQ=255) cAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc < 2:837432/150‑1 (MQ=255) cAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc > 1:1647337/1‑150 (MQ=255) aGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg < 2:2400247/150‑1 (MQ=255) gCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTg > 2:1358511/1‑150 (MQ=255) cGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCgaag < 2:3279124/150‑1 (MQ=255) | GACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAG > CP009273/4461171‑4461465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |