| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,474,526 | C→A | 11.9% | D415Y (GAC→TAC) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,474,526 | 0 | C | A | 11.9% | 1360.7 / 100.7 | 389 | D415Y (GAC→TAC) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base C (158/184); new base A (31/15); total (189/200) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.57e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 395 total aligned reads displayed.
CGCCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGT > CP009273/4474377‑4474675 | cgcCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTc > 2:976834/1‑150 (MQ=255) cccAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCAc > 2:1644341/1‑150 (MQ=255) cccAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAAc > 2:56394/1‑150 (MQ=255) aCTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGtt < 2:2478476/150‑1 (MQ=255) cTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTc > 1:638687/1‑150 (MQ=255) tACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAg < 1:250341/150‑1 (MQ=255) tACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAg < 2:2187512/150‑1 (MQ=255) tAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCgg < 1:3471485/150‑1 (MQ=255) aaaGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGc > 2:862191/1‑150 (MQ=255) aGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCaa < 2:4023896/150‑1 (MQ=255) gCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAAt < 1:4056370/150‑1 (MQ=255) gACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGt < 1:3543447/150‑1 (MQ=255) cAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTc > 1:3645817/1‑150 (MQ=255) ggAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCAt > 1:4654851/1‑150 (MQ=255) gAAGCAACCTGCGGTAATCGCCCCACCAGGACTAACGCCAATGTTCGCCTTATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCTTCACCCAGCGGTAAGCTCCATGCGCGGTTACCGGATTGTTCAGACGCGTCAATCAGTTCATg < 2:806558/150‑1 (MQ=255) gAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATg < 2:4968912/150‑1 (MQ=255) gAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATg > 1:1511052/1‑150 (MQ=255) gCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGc > 1:1754956/1‑150 (MQ=255) gCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGc > 2:3090282/1‑150 (MQ=255) gCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGc < 1:1069936/150‑1 (MQ=255) aaCCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCa < 2:3326715/150‑1 (MQ=255) aaCCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCa < 2:1896843/150‑1 (MQ=255) tGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCgg > 1:2923390/1‑150 (MQ=255) gCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGa > 1:4272914/1‑150 (MQ=255) cGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGAt > 1:3201651/1‑150 (MQ=255) ggTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCACTCAGTTCATGGGCCAGCGGAtt > 1:2315086/1‑150 (MQ=255) ggTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGAtt > 2:1261329/1‑150 (MQ=255) ggTAATCGCCCCACCAGGACGACCGCCAAGGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCACTCAGTTCATGGGCCAGCGGAtt < 2:2974459/150‑1 (MQ=255) gTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTa > 2:2378862/1‑150 (MQ=255) cGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGtt < 2:137465/150‑1 (MQ=255) cGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGtt > 2:4628563/1‑150 (MQ=255) ccccACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGAGTATGGTTCg > 2:3443279/1‑150 (MQ=255) cccACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGc > 2:3724295/1‑150 (MQ=255) cccACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGc > 2:3909475/1‑150 (MQ=255) accaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCAt < 1:1002742/150‑1 (MQ=255) caGGACGACCGCCAATGTTCGCCATATAGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCa < 1:1287715/150‑1 (MQ=255) ggACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGa < 1:4808028/150‑1 (MQ=255) acgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGAcc > 2:1504991/1‑150 (MQ=255) cgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCa < 1:4520591/150‑1 (MQ=255) gacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAg < 1:4730843/150‑1 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCTCCGGTTTGTTCAGACGCGGCAATCAGTTCATGTGCCAGCGGATTATGGTTCGCCATCAGACCAGt < 2:4123401/150‑1 (MQ=255) cGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTaa < 1:4363371/150‑1 (MQ=255) cGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTaa < 1:661810/150‑1 (MQ=255) gCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAat < 1:1039891/150‑1 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata > 1:4903197/1‑150 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata > 1:5111911/1‑150 (MQ=255) cAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAatat > 1:3269046/1‑150 (MQ=255) cAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAatat < 1:1609278/150‑1 (MQ=255) aaTGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatg > 2:1782787/1‑150 (MQ=255) cGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAcc < 1:1851860/150‑1 (MQ=255) cGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAcc < 2:4876579/150‑1 (MQ=255) cGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAcc > 1:3972811/1‑150 (MQ=255) gCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAccc > 2:4413825/1‑150 (MQ=255) ccATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCa > 1:2396548/1‑150 (MQ=255) cATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAg < 2:1194445/150‑1 (MQ=255) cATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAg > 1:1948459/1‑150 (MQ=255) atatCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgc > 2:4211504/1‑150 (MQ=255) cGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGa > 1:1831330/1‑150 (MQ=255) cGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGa > 2:4502584/1‑150 (MQ=255) aaaaTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCGTTCAGACCAGTAATATGATGACCGTGCGCGAtgtc < 2:4741561/150‑4 (MQ=255) aaTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGc > 2:1159613/1‑150 (MQ=255) aaTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGc > 1:2989707/1‑150 (MQ=255) gccAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCg < 2:1038295/149‑1 (MQ=255) aGTTGTTCCTGATACTCGTCACCCAGCTGTAAGCGACATGCGAGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCTATCACGAATTCACCGGta < 2:4346955/150‑2 (MQ=255) tgttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGc < 2:1967051/150‑1 (MQ=255) gttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCg > 2:3792417/1‑150 (MQ=255) ttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGt > 1:3315885/1‑150 (MQ=255) ttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGt > 2:1846659/1‑150 (MQ=255) tCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTc < 2:1544450/150‑1 (MQ=255) aTACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCAc > 1:3111234/1‑150 (MQ=255) cTCGTCACCCAGCGGTAAGCGCCAGGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTc < 1:4675127/150‑1 (MQ=255) tCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCa > 2:2477449/1‑150 (MQ=255) gTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAAt > 2:282199/1‑150 (MQ=255) tCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATc < 2:1850799/150‑1 (MQ=255) aCCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAc < 2:1834564/150‑1 (MQ=255) aCCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAc < 2:777146/150‑1 (MQ=255) cccAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAcc < 2:2687611/150‑1 (MQ=255) cccAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAcc > 2:4591629/1‑150 (MQ=255) ccAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGAAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAcag > 1:1351858/1‑148 (MQ=255) ccAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCg > 2:1745955/1‑150 (MQ=255) aGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCt > 1:2799885/1‑150 (MQ=255) cGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTc < 1:258490/150‑1 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc < 2:3654885/150‑1 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc < 1:5803/150‑1 (MQ=255) gTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCg < 1:4101620/150‑1 (MQ=255) atcgcCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCt > 1:2694397/3‑150 (MQ=255) ccATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCaaa < 2:638701/150‑1 (MQ=255) cATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCaaaa > 2:3599294/1‑150 (MQ=255) cATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCaaaa > 1:3875999/1‑150 (MQ=255) cATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCaaaa < 1:3727332/150‑1 (MQ=255) aTGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAAc < 2:2654595/150‑1 (MQ=255) tGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACg < 1:862191/150‑1 (MQ=255) cgcgGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCt > 1:1010224/1‑150 (MQ=255) cgcgGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCt < 2:3405832/150‑1 (MQ=255) gcgGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTc < 1:2191181/150‑1 (MQ=255) cgGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCa < 1:3378670/150‑1 (MQ=255) gTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAAc > 2:5059482/1‑150 (MQ=255) gTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAAc < 1:957438/150‑1 (MQ=255) tCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACg > 1:2017810/1‑150 (MQ=255) cACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGt > 2:3475142/1‑150 (MQ=255) | CGCCCAGTTGTACTTACGGGTAAAGCGTGACAGGAAGCAACCTGCGGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGT > CP009273/4474377‑4474675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |