| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,197,650 | T→C | 10.4% | intergenic (‑110/+65) | ymfJ ← / ← cohE | e14 prophage; uncharacterized protein/e14 prophage; repressor protein phage e14 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,197,650 | 0 | T | C | 10.4% | 658.6 / 54.3 | 201 | intergenic (‑110/+65) | ymfJ/cohE | e14 prophage; uncharacterized protein/e14 prophage; repressor protein phage e14 |
| Reads supporting (aligned to +/- strand): ref base T (83/97); new base C (7/14); total (90/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
GCAACAATGCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAATGTAA > CP009273/1197501‑1197799 | gCAACAATGCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACAtt > 2:298886/1‑150 (MQ=255) caacaaTGCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTa > 1:2968382/1‑150 (MQ=255) aacaaTGCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTAt > 2:1302795/1‑150 (MQ=255) gCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTAtct < 2:2773134/150‑1 (MQ=255) gATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑a > 1:3957202/1‑150 (MQ=255) gATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑a < 1:3662262/150‑1 (MQ=255) aTCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aa > 2:5148555/1‑150 (MQ=255) tCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aaa > 1:4771620/1‑150 (MQ=255) tCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aaa < 2:3245086/150‑1 (MQ=255) tCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aaa > 1:2539585/1‑150 (MQ=255) tCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aaa > 2:4190810/1‑150 (MQ=255) tCACATGCTTCAAATTCTGCTCAGTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑aaa < 2:3245154/150‑1 (MQ=255) acaTGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAgg < 1:1132728/150‑1 (MQ=255) caTGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGt < 1:3795039/150‑1 (MQ=255) gCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACa > 2:1033295/1‑150 (MQ=255) gCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACa < 2:606162/150‑1 (MQ=255) ttCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACAtt > 1:3235418/1‑150 (MQ=255) tCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTCCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTg < 2:1076098/150‑1 (MQ=255) cAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGt > 1:4102296/1‑150 (MQ=255) aaaTTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTc > 1:808678/1‑150 (MQ=255) aaaTTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTc > 1:2613952/1‑150 (MQ=255) aaaTTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTc > 2:1267463/1‑150 (MQ=255) aaTTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCa < 2:509992/150‑1 (MQ=255) ttCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAg > 2:5131093/1‑150 (MQ=255) cTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGta < 1:687476/150‑1 (MQ=255) attcatCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATaaaaa > 2:4350106/1‑150 (MQ=255) ttcatCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATaaaaaa < 2:4188290/150‑1 (MQ=255) ttcatCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATaaaaaa < 2:3968993/150‑1 (MQ=255) catCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAAc < 1:1255549/150‑1 (MQ=255) catCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAAc < 1:1871906/150‑1 (MQ=255) atCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAAcc < 2:1633484/150‑1 (MQ=255) atCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAAcc < 2:3817422/150‑1 (MQ=255) tctctcCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGa < 1:4797829/150‑1 (MQ=255) tctcCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAg > 2:2789598/1‑150 (MQ=255) ccACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAg > 1:2472574/1‑150 (MQ=255) cACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAgg > 1:1504432/1‑150 (MQ=255) cACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAgg > 2:1710949/1‑150 (MQ=255) aCTGAAATCATCCGCTAACGACTCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGt < 2:5126063/150‑1 (MQ=255) cTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGtt > 1:3740178/1‑150 (MQ=255) gAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCa < 2:2066043/150‑1 (MQ=255) tcatcCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATaaa > 1:1315076/1‑150 (MQ=255) ccGCTAACGAATCATCCCTGACTTCGTACGTACCGGGCGGGCTACTGCGTGGGCGTCATGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AATGGTAAATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACAtt > 2:3164650/1‑150 (MQ=255) cGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg > 2:1872607/1‑150 (MQ=255) cGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg < 1:3620206/150‑1 (MQ=255) cGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg < 2:4116364/150‑1 (MQ=255) cGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTGTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTg > 2:4425747/1‑150 (MQ=255) tAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGAtt > 1:1044964/1‑150 (MQ=255) aaTCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCt > 2:2517900/1‑150 (MQ=255) aaTCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCt < 2:544387/150‑1 (MQ=255) tcatcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCttt < 2:325512/150‑1 (MQ=255) catcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTg > 2:2435012/1‑150 (MQ=255) catcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTg < 1:3326111/150‑1 (MQ=255) catcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTg < 1:2099095/150‑1 (MQ=255) atcCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGa < 2:2657298/150‑1 (MQ=255) ccGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGAttt > 1:1108172/1‑150 (MQ=255) ggTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTg < 2:3973623/150‑1 (MQ=255) gTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGt < 1:2941128/150‑1 (MQ=255) gtacgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttc > 2:1290252/1‑150 (MQ=255) gtacgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttc > 1:1620440/1‑150 (MQ=255) tacgtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTAtcttct < 2:672514/150‑1 (MQ=255) gtacCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTgg < 1:1768049/150‑1 (MQ=255) gggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTc > 1:2811805/1‑150 (MQ=255) ggcgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTcc > 1:4503726/1‑150 (MQ=255) cgggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTg > 1:1848958/1‑150 (MQ=255) gggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTga < 1:1294938/150‑1 (MQ=255) gggcTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTga < 1:418109/150‑1 (MQ=255) cTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGaa > 1:1147083/1‑150 (MQ=255) tACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAGGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATTTTCTTGGTTTTCCTGAGaaa < 1:3324248/150‑1 (MQ=255) cTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTATGTATCTTCTTGGTTTTCCTGAGAAAAt > 1:5086299/1‑150 (MQ=255) ttCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATc < 1:3958612/150‑1 (MQ=255) tCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATca > 1:746801/1‑150 (MQ=255) cGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTGTAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATcac > 2:343425/1‑150 (MQ=255) cGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATcac > 1:480740/1‑150 (MQ=255) gTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCa > 2:1346768/1‑150 (MQ=255) gTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACAATGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCa > 2:2367931/1‑150 (MQ=255) cctgcctgTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAAt > 2:3368600/1‑150 (MQ=255) cctgTTTGTTGTTTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTCTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATtata < 1:3345913/150‑1 (MQ=255) tgtttgttGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATaga < 1:3121191/150‑1 (MQ=255) gtttgttGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATagag < 2:3786567/150‑1 (MQ=255) tgttgtTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCaa > 1:4596997/1‑150 (MQ=255) tgttgtTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCaa > 1:3861795/1‑150 (MQ=255) gttgttTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAAt < 2:2931843/150‑1 (MQ=255) gttgttTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATAGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAAt > 1:839566/1‑150 (MQ=255) gttgttTCTCTTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAAt < 1:368556/150‑1 (MQ=255) tgtgTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAACCATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTa < 2:3904523/150‑1 (MQ=255) gttTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTAc > 2:1822137/1‑150 (MQ=255) ctctTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGtt > 1:4290385/1‑150 (MQ=255) tctTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTg < 1:1822137/150‑1 (MQ=255) tctTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTg < 1:1728794/150‑1 (MQ=255) tctTGGGTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTAACGTTg < 1:1299855/150‑1 (MQ=255) tGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATc < 2:4484743/150‑1 (MQ=255) gTACATCATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTTTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTa < 1:1485907/150‑1 (MQ=255) tACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTaa < 1:3920436/150‑1 (MQ=255) tACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTaa < 2:2892052/150‑1 (MQ=255) tACATTATGTATCTC‑AAAGGTACACTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTaa < 2:3740138/150‑1 (MQ=255) aCATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCCTAACCATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTCTCCTGAGAAAATCACAGTACCAATGATAGAGCAATTACCGTTGATCTTAAt < 1:3549537/150‑1 (MQ=255) aCATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAAt > 1:3479425/1‑150 (MQ=255) cATTATGTATCTCAAAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAAt < 1:1462173/150‑1 (MQ=255) ttATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAATGTa > 2:467070/1‑150 (MQ=255) tATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAATGTaa > 1:1932764/1‑150 (MQ=255) | GCAACAATGCGATCACATGCTTCAAATTCTGCTCATTCATCTATTCTCTCCACTGAAATCATCCGCTAACGAATCATCCCGGTCTTCGTACGTACCGGGCGGGCTACTTCGTGGGCGTCCTGCCTGTTTGTTGTTTCTCTTGGGTACATTATGTATCTC‑AAAGGTACATTGTCAAGTATAAAAAAACCTGCCGAAGCAGGTTCATAAACATTGATTAGGCTTTGATTTTGTATCTTCTTGGTTTTCCTGAGAAAATCACAGTACCAATTATAGAGCAATTACCGTTGATCTTAATGTAA > CP009273/1197501‑1197799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |