| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,670,193 | G→T | 5.8% | A142E (GCG→GAG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,670,193 | 0 | G | T | 5.8% | 1238.7 / 31.7 | 316 | A142E (GCG→GAG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (169/128); new base T (10/9); total (179/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 318 total aligned reads displayed.
GCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACGAAG > CP009273/1670044‑1670342 | cAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGc > 1:557478/1‑150 (MQ=255) aaTGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGcc > 1:4573806/1‑150 (MQ=255) cAGCACTTGCAGGCCGACGCTGTCCGTGCTAACAAATACAATCCGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCcaccac < 1:884711/150‑1 (MQ=255) aCTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGaa < 1:698792/150‑1 (MQ=255) aCTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGaa > 1:1549802/1‑150 (MQ=255) ttGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAcc < 2:854737/150‑1 (MQ=255) tGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAccc > 2:3410297/1‑150 (MQ=255) gCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCg < 2:2263195/150‑1 (MQ=255) ggCCGACGCTGTCCGTGCGAACAACTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGa < 2:2918663/150‑1 (MQ=255) gCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGaa > 1:4411266/1‑150 (MQ=255) ccGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAAc < 1:3811061/150‑1 (MQ=255) gACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGt > 1:1942988/1‑150 (MQ=255) aCGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGtt > 2:2995949/1‑150 (MQ=255) gCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAc < 1:4208254/150‑1 (MQ=255) gCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTATGCCGAACGCCACCACCGAACCCGTGTACGTTAc > 1:4269314/1‑150 (MQ=255) cTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTAcc < 1:4885822/150‑1 (MQ=255) tGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCg > 2:1543416/1‑150 (MQ=255) tCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcc < 1:2485624/150‑1 (MQ=255) tCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcc > 1:2130487/1‑150 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGACATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcccc < 1:4445429/150‑1 (MQ=255) gTGCGAACAAATACACTCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGTTTTAGACGAAATCTTGCAACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCg < 2:5143450/150‑1 (MQ=255) gTGCGAACAAATACAATCAGCAGCAGGAAGGACACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCg < 1:3300011/150‑1 (MQ=255) tACACTCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATAcc < 1:3560407/150‑1 (MQ=255) aCAATCAGCAGCAGGAAGTAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg < 2:2621324/150‑1 (MQ=255) aCAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg < 1:514407/150‑1 (MQ=255) cAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGa < 2:561201/150‑1 (MQ=255) agcagcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAac > 1:2654401/1‑150 (MQ=255) gcagcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAaca < 2:1690822/150‑1 (MQ=255) ggaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCg > 2:3162836/1‑150 (MQ=255) ggaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCg > 2:1403090/1‑150 (MQ=255) gaaggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGt < 1:160193/150‑1 (MQ=255) aggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCa > 2:3874080/1‑150 (MQ=255) ggaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAg > 2:1853919/1‑150 (MQ=255) gaaACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAgg < 2:3906388/150‑1 (MQ=255) aaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTg > 1:1122896/1‑150 (MQ=255) aaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTg < 1:776574/150‑1 (MQ=255) cGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGaa > 1:1389181/1‑150 (MQ=255) cGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGaa < 1:4802730/150‑1 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 2:1050709/1‑150 (MQ=255) cAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATAtt > 1:3226268/1‑150 (MQ=255) cAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATAtt > 2:4830415/1‑150 (MQ=255) cAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATAtt > 2:4697717/1‑150 (MQ=255) agagCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTg < 2:1646842/150‑1 (MQ=255) gagCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGa > 2:4976935/1‑150 (MQ=255) gagCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGa > 2:2562789/1‑150 (MQ=255) gagCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGa > 2:411964/1‑150 (MQ=255) agCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGAc > 1:2930459/1‑150 (MQ=255) gccgccAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGAcc > 1:2714623/1‑150 (MQ=255) gccgccAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGAcc < 2:1506606/150‑1 (MQ=255) cgccAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAg < 2:559644/150‑1 (MQ=255) cAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAAt < 2:5114063/150‑1 (MQ=255) cAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAAt > 1:525079/1‑150 (MQ=255) cAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAAt < 2:3702423/150‑1 (MQ=255) aGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATc < 2:86387/150‑1 (MQ=255) ttCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGt > 1:575620/1‑150 (MQ=255) tCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTg > 1:3918266/1‑150 (MQ=255) tCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTg < 1:2446741/150‑1 (MQ=255) aTTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCTGGTGAATATTGACCAGAATCGGTGcc < 2:2807006/150‑1 (MQ=255) ttttGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCa < 2:108746/150‑1 (MQ=255) tgtgACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTc > 1:4132877/1‑150 (MQ=255) gtgACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTGGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTcc < 1:3403689/150‑1 (MQ=255) cGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACCCTTCCGTCAGGTGAATATTGACCAGCATCGGTGCCATTCCcgcg > 2:4951388/1‑150 (MQ=255) ggTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGTCCAGAATCGGTGCCATTCCCGCGt < 2:3305034/150‑1 (MQ=255) ggTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGt < 1:3146177/150‑1 (MQ=255) agcaTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTg < 1:417050/117‑1 (MQ=255) caTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAg > 1:2232736/1‑150 (MQ=255) aTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGa > 1:5040795/1‑150 (MQ=255) aTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGa > 1:3654178/1‑150 (MQ=255) tCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGAt < 1:1265524/150‑1 (MQ=255) cAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATa > 1:4628305/1‑150 (MQ=255) cAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATa > 1:3496754/1‑150 (MQ=255) aTGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGc < 1:1411738/150‑1 (MQ=255) aTGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGc < 1:1036669/150‑1 (MQ=255) ggTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTg > 1:2538664/1‑150 (MQ=255) ggTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTg > 1:4388536/1‑150 (MQ=255) ggTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTg > 2:4894943/1‑150 (MQ=255) tAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaa < 2:1243998/150‑1 (MQ=255) tAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaa < 2:524374/150‑1 (MQ=255) aGACGAACTCTTGCCACACAGTTTGCCGTACGCCACCACCGAACCCGTGAACGTGACCGCCCCGTTGAAGAGACCGAGGCCCTCTTCCGTCAGGTGAATATTGACCAGACTCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaat < 2:4776746/150‑2 (MQ=255) aGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaaa > 1:5092438/1‑150 (MQ=255) cGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGcc < 2:2190416/150‑1 (MQ=255) gAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGAGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCa > 2:2451890/1‑150 (MQ=255) aaTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAc > 2:3123601/1‑150 (MQ=255) aTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAcc > 2:4290347/1‑150 (MQ=255) aTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAcc < 1:4539412/150‑1 (MQ=255) tCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCa < 2:2312875/150‑1 (MQ=255) cTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAg > 1:1731318/1‑150 (MQ=255) cTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAg < 2:4178291/150‑1 (MQ=255) gCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCAc < 1:825807/150‑1 (MQ=255) ccACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACt < 2:2889802/150‑1 (MQ=255) ccACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACt < 2:784993/150‑1 (MQ=255) cacacaGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTg > 2:4939118/1‑150 (MQ=255) acacaGTTTGACGAACGCCACCACCGAACCCGAGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTACCGTCAGGTTAATATTGACCATAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgc > 2:832681/1‑150 (MQ=255) cacaGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgcc < 1:2348005/150‑1 (MQ=255) acaGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgccg > 1:1469666/1‑150 (MQ=255) caGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgccgc < 2:706120/150‑1 (MQ=255) gAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCAc > 2:4051449/1‑150 (MQ=255) gAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCAc < 2:4504891/150‑1 (MQ=255) gAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCAc > 2:2651363/1‑150 (MQ=255) aaCGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACg < 2:3507392/150‑1 (MQ=255) | GCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACGAAG > CP009273/1670044‑1670342 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |