| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,974,836 | C→T | 7.6% | W86* (TGG→TGA) | otsA ← | trehalose‑6‑phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,974,836 | 0 | C | T | 7.6% | 1127.6 / 56.6 | 316 | W86* (TGG→TGA) | otsA | trehalose‑6‑phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base C (142/150); new base T (12/12); total (154/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 318 total aligned reads displayed.
GGCAACAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACCACAGTC > CP009273/1974687‑1974984 | ggCAACAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGc < 2:1175469/150‑1 (MQ=255)ggCAACAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGc > 1:3407730/1‑150 (MQ=255) aaCAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCag > 2:2238349/1‑150 (MQ=255) aCAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGTCaga > 1:1516772/1‑150 (MQ=255) aCAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGTCaga > 1:2861781/1‑150 (MQ=255) cAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCagag > 1:1818547/1‑150 (MQ=255) gTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAAc > 1:4758221/1‑150 (MQ=255) gTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAAc < 1:4602686/150‑1 (MQ=255) tGATAATCGTGGATCCTGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACg < 2:1549915/150‑1 (MQ=255) tGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACg < 1:938633/150‑1 (MQ=255) gATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACgg > 1:4552991/1‑150 (MQ=255) gATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACgg > 1:4553043/1‑150 (MQ=255) aTAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGTCAGAGAACGGc < 1:4192928/150‑1 (MQ=255) aTCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCAtt > 2:4294632/1‑150 (MQ=255) tCGTGGATCCAGATACTGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTg < 1:3076720/150‑1 (MQ=255) cGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAGCGGCATTgg > 1:393845/1‑150 (MQ=255) cGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTgg < 2:4160800/150‑1 (MQ=255) tGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGgag > 2:4715663/1‑150 (MQ=255) tGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGgag > 2:1422043/1‑150 (MQ=255) ggATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGgaga > 2:720381/1‑150 (MQ=255) tCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAAtt < 2:1883991/150‑1 (MQ=255) ccAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTg < 2:4576282/150‑1 (MQ=255) aGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGt > 2:3107009/1‑150 (MQ=255) aGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGt > 2:529640/1‑150 (MQ=255) gATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGtt > 1:104253/1‑150 (MQ=255) aTAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTg < 2:1818159/150‑1 (MQ=255) aTAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTg < 1:3976187/150‑1 (MQ=255) tCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTAt < 1:3011047/150‑1 (MQ=255) aTCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTc > 1:1178037/1‑150 (MQ=255) cGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGt < 1:4797934/150‑1 (MQ=255) gTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTc > 1:1970368/1‑150 (MQ=255) tCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCa > 1:1907108/1‑150 (MQ=255) cTTTCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATATCCGTCCCAGGCAGGACGCTGAAATTTCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCat < 2:106329/150‑2 (MQ=255) tGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAgg > 1:2735229/1‑150 (MQ=255) cAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTc < 1:3371332/150‑1 (MQ=255) cAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTg > 2:4355472/1‑150 (MQ=255) aGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGt > 2:3760238/1‑150 (MQ=255) cGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTc < 2:4523640/150‑1 (MQ=255) cGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTc < 1:174491/150‑1 (MQ=255) aGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTg < 1:1695389/150‑1 (MQ=255) aGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTg < 2:3813456/150‑1 (MQ=255) aGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTg > 2:2510031/1‑150 (MQ=255) gTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGa > 1:3743273/1‑150 (MQ=255) tAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAg < 2:517198/150‑1 (MQ=255) ttATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTa > 1:860384/1‑150 (MQ=255) tCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTaaaa < 2:2560503/150‑1 (MQ=255) tCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTaaaa < 1:3567565/150‑1 (MQ=255) tGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAaga < 1:439151/150‑1 (MQ=255) cAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATACTGAAAAGCGGGCCAGAGAACGGCCTTGGAGATTTGGTTGTAGTCTTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGc > 1:2319502/1‑150 (MQ=255) gCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGccc > 2:3088074/1‑150 (MQ=255) gCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGccc < 2:3210634/150‑1 (MQ=255) gCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGccc < 1:4131189/150‑1 (MQ=255) gCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGccc < 1:3827623/150‑1 (MQ=255) cAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCACAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCa > 2:4024502/1‑150 (MQ=255) aaCGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCAc < 2:2401380/150‑1 (MQ=255) aaCGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCAc > 2:4658071/1‑150 (MQ=255) aaCGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCAc < 2:736139/150‑1 (MQ=255) aaCGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCAc < 2:92922/150‑1 (MQ=255) tttACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATg < 1:2578027/150‑1 (MQ=255) tAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCttt < 1:1561122/150‑1 (MQ=255) aGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCtttt < 1:3338980/150‑1 (MQ=255) tAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTc > 2:1730197/1‑150 (MQ=255) aGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCa < 1:127267/150‑1 (MQ=255) aGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCa < 1:532790/150‑1 (MQ=255) cGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCt > 1:451049/1‑150 (MQ=255) cGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCt < 2:486138/150‑1 (MQ=255) ccAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCttttt < 1:3659935/150‑1 (MQ=255) ccAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCttttt > 1:3001575/1‑150 (MQ=255) caggcaggACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCtttttt > 1:4289552/1‑150 (MQ=255) caggACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCg > 1:2194391/1‑150 (MQ=255) cGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGa < 2:2054854/150‑1 (MQ=255) cGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGa > 2:1951856/1‑150 (MQ=255) gCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGAt < 2:3571679/150‑1 (MQ=255) gCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGAt > 2:1357214/1‑150 (MQ=255) cTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATc > 2:3821477/1‑150 (MQ=255) tGAAATTGCACCAGATCGAGCCGATACTGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATcc < 2:1215797/150‑1 (MQ=255) aTTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTACTCGTCAAGGTGCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCAt > 2:1913389/1‑150 (MQ=255) tGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTc > 1:3937313/1‑150 (MQ=255) aCCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCt < 2:3026346/150‑1 (MQ=255) aCCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCt > 2:1314978/1‑150 (MQ=255) ccAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTg < 1:2401959/150‑1 (MQ=255) cAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGt > 1:457366/1‑150 (MQ=255) gATCGAGCCGATAATGAAAAGCGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGttt > 1:4921274/1‑150 (MQ=255) gAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTcacc > 2:278304/1‑150 (MQ=255) aGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTcacca > 1:3200699/1‑150 (MQ=255) cGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTc > 1:894105/1‑150 (MQ=255) gATAATGAAAAGCGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTcc < 1:4726300/150‑1 (MQ=255) gATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTcc > 1:2652280/1‑150 (MQ=255) aTAATGAAAAGCGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCa < 2:2861781/150‑1 (MQ=255) aTAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCa > 2:4975725/1‑150 (MQ=255) tAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAg < 1:1528411/150‑1 (MQ=255) tGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCa < 2:3452414/150‑1 (MQ=255) tGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCa < 1:5096739/150‑1 (MQ=255) gAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCaa > 1:4971961/1‑150 (MQ=255) gAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCaa > 2:125020/1‑150 (MQ=255) aaaGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAAc > 1:2612196/1‑150 (MQ=255) aGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACca < 2:500081/150‑1 (MQ=255) cGGGTCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACcaca > 1:3232657/1‑150 (MQ=255) cGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAAGGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACcaca > 2:2013076/1‑150 (MQ=255) gggCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACCACAg > 1:1027871/1‑150 (MQ=255) | GGCAACAGGTGATAATCGTGGATCCAGATAATGTCATCGTCTTGCAACAGCGGCAGTAATTTATCTGCCAGCAACGCATTTACGCGTAGATAGCCGTCCCAGGCAGGACGCTGAAATTGCACCAGATCGAGCCGATAATGAAAAGCGGGCCAGAGAACGGCATTGGAGAATTGGTTGTAGTATTCGTCAAGGTCCTGTTCGCTGAGGTTAAAAGAGGCCCACGTAATGTTACCTTTTTTCACCTTTTTTAGCGGCTGATCCTCATTCCCTGTTTCACCACTCCAGCCAAACCACAGTC > CP009273/1974687‑1974984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |