| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,323,370 | G→T | 5.6% | pseudogene (4512/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,323,370 | 0 | G | T | 5.6% | 1312.7 / 32.0 | 336 | pseudogene (4512/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (171/146); new base T (8/11); total (179/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 345 total aligned reads displayed.
GCAAGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATT > CP009273/2323221‑2323519 | gCAAGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACg > 2:5042339/1‑150 (MQ=255) aGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAAt > 2:5016900/1‑150 (MQ=255) aGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAAt > 2:1752230/1‑150 (MQ=255) tgtTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTg > 1:2855142/1‑150 (MQ=255) gtTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGc > 2:5124959/1‑150 (MQ=255) gtTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGc < 1:698782/150‑1 (MQ=255) ttGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGcc > 2:4112333/1‑150 (MQ=255) tGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGccc > 2:3156077/1‑150 (MQ=255) agagTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCtttt < 2:4921318/150‑1 (MQ=255) agagTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCtttt < 2:4689058/150‑1 (MQ=255) gagTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCttttt < 1:1834175/150‑1 (MQ=255) agTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTg > 1:4388402/1‑150 (MQ=255) gTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGc < 1:569974/150‑1 (MQ=255) cAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGaa > 2:2861897/1‑150 (MQ=255) cAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGaa > 2:3916296/1‑150 (MQ=255) gCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGACgcgc > 1:5053794/1‑150 (MQ=255) gCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAgcgc < 1:258909/150‑1 (MQ=255) ccAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCgca < 2:3690852/150‑1 (MQ=255) cAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCgcag < 2:2585128/150‑1 (MQ=255) cAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCgcag > 2:605105/1‑150 (MQ=255) tAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTTCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCaa < 2:378277/150‑1 (MQ=255) ccAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATg > 2:766468/1‑150 (MQ=255) cAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATgg > 2:4270944/1‑150 (MQ=255) aGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGc < 2:4586290/150‑1 (MQ=255) cGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGa < 2:907557/150‑1 (MQ=255) gATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGaa < 2:2081130/150‑1 (MQ=255) gATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGaa > 1:4017033/1‑150 (MQ=255) tGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGa < 2:1356663/150‑1 (MQ=255) gcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCg > 1:4167303/1‑150 (MQ=255) gTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTcc > 1:969802/1‑150 (MQ=255) ttCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTccc < 1:3514730/150‑1 (MQ=255) ttCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTccc < 1:3825464/150‑1 (MQ=255) cACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGt > 2:3975162/1‑150 (MQ=255) cTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCa < 2:3353806/150‑1 (MQ=255) ttATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAg > 1:4181151/1‑150 (MQ=255) ttATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAg > 1:2472880/1‑150 (MQ=255) tATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGt < 1:3939537/150‑1 (MQ=255) aTTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGtt < 1:2193720/150‑1 (MQ=255) ttCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCt < 2:4542423/150‑1 (MQ=255) ttCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCt > 1:1916570/1‑150 (MQ=255) aCCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTc > 1:3128282/1‑150 (MQ=255) aCCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTc > 2:1916981/1‑150 (MQ=255) aCCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTc > 2:1916414/1‑150 (MQ=255) ccTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCa > 2:1819287/1‑150 (MQ=255) cTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCAc > 1:1730193/1‑150 (MQ=255) tGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGATCCCGTCAGTTCTTTCAcc > 1:3332907/1‑150 (MQ=255) cATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCgg > 2:82533/1‑150 (MQ=255) cATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCgg < 1:4998940/150‑1 (MQ=255) tCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCa > 2:2463690/1‑150 (MQ=255) tCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCa > 2:4877006/1‑150 (MQ=255) ggTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCat > 1:2618735/1‑150 (MQ=255) ggTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCat > 1:2962882/1‑150 (MQ=255) ccATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCAtata > 1:2333329/1‑150 (MQ=255) cATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAg > 2:3443642/1‑150 (MQ=255) tCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGcc > 2:2291547/1‑150 (MQ=255) tCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGtt < 1:2926446/150‑1 (MQ=255) cccTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTc > 2:2062930/1‑150 (MQ=255) cccTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTc < 2:2179866/150‑1 (MQ=255) cccTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTc < 2:2314495/150‑1 (MQ=255) cTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGc > 1:1562042/1‑150 (MQ=255) tGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGcc < 1:4823262/150‑1 (MQ=255) gCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGccc < 2:1770055/150‑1 (MQ=255) cGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcat > 2:1106419/1‑150 (MQ=255) cGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcat < 2:3296003/150‑1 (MQ=255) cAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcattt < 1:391671/150‑1 (MQ=255) cTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcatttcattt > 2:4765711/1‑150 (MQ=255) ctgcGAAGGTGCATAGGAACGCACATAACGAGCATGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTTACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGTCCAGTTCGCCCATTTCATTTCgcgc > 1:664305/1‑150 (MQ=255) tgcGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCt > 1:4556294/1‑150 (MQ=255) gcgcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCtt < 1:770949/150‑1 (MQ=255) gcgcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCtt > 2:16063/1‑150 (MQ=255) gcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCtttt < 2:4359282/150‑1 (MQ=255) ggTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTcc < 1:3684167/150‑1 (MQ=255) ggTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTcc < 1:1111795/150‑1 (MQ=255) gCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGc > 2:1309824/1‑150 (MQ=255) gCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATGTCGCGCTTTTTCCAGc > 2:386908/1‑150 (MQ=255) cATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCa < 1:2839429/150‑1 (MQ=255) aTAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCaa > 1:3755829/1‑150 (MQ=255) tAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAAt > 1:3212944/1‑150 (MQ=255) aGGAACGCACCTAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAAtt < 2:274261/150‑1 (MQ=255) gAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGc > 1:1745220/1‑150 (MQ=255) aaCGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGcc < 2:4939893/150‑1 (MQ=255) gCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCct > 1:1784978/1‑150 (MQ=255) caTAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCctgct > 2:1219872/1‑150 (MQ=255) tAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGt > 2:4388035/1‑150 (MQ=255) aaCGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGtt < 1:3160058/150‑1 (MQ=255) aaCGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGtt > 2:2985373/1‑150 (MQ=255) aCGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGttt > 1:4507991/1‑150 (MQ=255) cGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTc < 2:3556286/150‑1 (MQ=255) cGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTc < 1:881651/150‑1 (MQ=255) gAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTcg > 2:672528/1‑150 (MQ=255) cAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCgcgg > 1:3600806/1‑150 (MQ=255) aggaggCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCgcggc > 2:1155434/1‑150 (MQ=255) aggaggCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCgcggc > 1:2128330/1‑150 (MQ=255) aggCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGtt > 2:4195840/1‑150 (MQ=255) aGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGt > 1:1007081/1‑150 (MQ=255) gAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGtt > 2:1707068/1‑150 (MQ=255) aaCTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGttt < 1:5097089/150‑1 (MQ=255) aCGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTa < 1:1072820/150‑1 (MQ=255) gAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAtt > 1:3432714/1‑150 (MQ=255) gAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAtt > 1:1369791/1‑150 (MQ=255) | GCAAGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATT > CP009273/2323221‑2323519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |