| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,352,965 | C→A | 5.0% | E223* (GAA→TAA) | rhmT ← | putative L‑rhamnonate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,352,965 | 0 | C | A | 5.0% | 1173.9 / 22.7 | 296 | E223* (GAA→TAA) | rhmT | putative L‑rhamnonate transporter |
| Reads supporting (aligned to +/- strand): ref base C (123/157); new base A (10/6); total (133/163) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 312 total aligned reads displayed.
TTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGG > CP009273/2352816‑2353114 | ttttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttc > 2:4870809/1‑150 (MQ=255) tttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttct < 1:3181346/150‑1 (MQ=255) ttGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttctt > 2:3902198/1‑150 (MQ=255) tGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttcttc > 1:411401/1‑150 (MQ=255) tGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGttcttc < 2:3786227/150‑1 (MQ=255) gTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa > 1:3978769/1‑150 (MQ=255) gTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa < 2:4560404/150‑1 (MQ=255) gTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCa < 1:45671/150‑1 (MQ=255) cccAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACtt < 2:4562798/150‑1 (MQ=255) ccAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTg < 2:1594128/150‑1 (MQ=255) cAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGc < 2:1828124/150‑1 (MQ=255) aaTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGt > 1:537943/1‑150 (MQ=255) aaTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGt < 1:93483/150‑1 (MQ=255) aTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATCATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGtt > 1:1814618/1‑150 (MQ=255) aTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGtt > 2:2412749/1‑150 (MQ=255) aTGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGtt < 2:228275/150‑1 (MQ=255) tGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttg > 2:1369046/1‑150 (MQ=255) gCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga > 2:840572/1‑150 (MQ=255) gCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttga < 1:2871150/150‑1 (MQ=255) ccGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGttgat < 2:5052888/150‑1 (MQ=255) cGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttgatt < 1:1903246/150‑1 (MQ=255) cGCAACCTGGGTCGGCAGGAAAAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttgatt > 1:2372234/1‑150 (MQ=255) cGCAACCTGGGTCGGCAGGAAAAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGttgatt < 2:496540/150‑1 (MQ=255) ccTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATaa < 1:1588831/150‑1 (MQ=255) tGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGc < 1:536867/150‑1 (MQ=255) gggTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCa < 1:1010551/150‑1 (MQ=255) gTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAAc > 1:4485749/1‑150 (MQ=255) cGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGt < 1:4674028/150‑1 (MQ=255) ggCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGtt < 2:1444653/150‑1 (MQ=255) cAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGtttt < 2:2991921/150‑1 (MQ=255) aGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGttttt < 2:2466443/150‑1 (MQ=255) aagaaAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCt < 1:1673578/150‑1 (MQ=255) gaaAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTg > 1:4607118/1‑150 (MQ=255) aaTTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGttt > 1:3797876/1‑150 (MQ=255) ttAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTAc > 2:3622279/1‑150 (MQ=255) aTCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCa > 2:3120026/1‑150 (MQ=255) tCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAg < 1:4322282/150‑1 (MQ=255) ccGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGa < 2:4440041/150‑1 (MQ=255) gTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaa < 1:565905/150‑1 (MQ=255) tAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaaa < 1:3902198/150‑1 (MQ=255) tAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGaaaa < 1:4993377/150‑1 (MQ=255) aCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGt < 1:911631/150‑1 (MQ=255) aCCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGt < 2:1292593/150‑1 (MQ=255) gCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGcc > 2:2480544/1‑150 (MQ=255) gCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGcc > 1:2099701/1‑150 (MQ=255) cACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTg > 1:2217989/1‑150 (MQ=255) cACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGACACTTTCTGTTGTTCTTCACTTGCCAGTAGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGAGCCTg > 1:895037/1‑150 (MQ=255) aCCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGc < 2:409150/150‑1 (MQ=255) cTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTc < 2:1864818/150‑1 (MQ=255) gAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg < 2:2020606/150‑1 (MQ=255) gAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg < 1:1996239/150‑1 (MQ=255) gAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg < 2:1086440/150‑1 (MQ=255) gAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCg < 2:4001818/150‑1 (MQ=255) aaTGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCgg > 2:2829636/1‑150 (MQ=255) aTGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgt < 2:1071703/150‑1 (MQ=255) tGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtg > 2:2245547/1‑150 (MQ=255) ggTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgt < 2:2941235/150‑1 (MQ=255) ggTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgt > 2:2178388/1‑150 (MQ=255) gTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtg > 2:3563245/1‑150 (MQ=255) tCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCCGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGgtgtgt < 1:3632846/150‑1 (MQ=255) cAGGGAGATAATCGCTAGTTGCCAGACTCGGCAATTACGCAGCGCATCGCTCAGCCTAGAAGTCACTTTCTGTTGTTCTTCACTTGCAAGTTGATTGATAAGCAACTTTTTTTATTGTTTACTCAGAAAACTTGCCTGCTCCGGTGTGtc > 2:783870/1‑150 (MQ=255) gTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatc < 2:461762/150‑1 (MQ=255) tAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGtcatca < 2:537943/150‑1 (MQ=255) aGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCaa > 2:4380934/1‑150 (MQ=255) aGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCaa > 2:3450462/1‑150 (MQ=255) aTAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGc > 1:1135412/1‑150 (MQ=255) aTAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGc > 1:507785/1‑150 (MQ=255) tCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaaa < 1:752245/150‑1 (MQ=255) cGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCaaaa > 1:1356376/1‑150 (MQ=255) cTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCAGTGTGTCATCAAGCCAAAAGa > 2:1038730/1‑150 (MQ=255) gTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAAtg < 2:4366350/150‑1 (MQ=255) ccAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGaa > 1:2705733/1‑150 (MQ=255) cAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAAt < 1:4807565/150‑1 (MQ=255) cAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAAt > 2:2105841/1‑150 (MQ=255) gCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGc > 2:2575285/1‑150 (MQ=255) gCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGc < 2:4239952/150‑1 (MQ=255) cATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCAc > 1:3426228/1‑150 (MQ=255) ttACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCg < 2:2683671/150‑1 (MQ=255) cGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACt < 1:3025711/150‑1 (MQ=255) aGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGcc > 2:1617935/1‑150 (MQ=255) gcATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCcaac < 1:3363484/150‑1 (MQ=255) aTCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCcaacaa > 2:2437879/1‑150 (MQ=255) cTCAGCCGAGAAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATGGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCt < 2:3400192/150‑1 (MQ=255) cAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTc < 2:646311/150‑1 (MQ=255) gCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCaa < 2:1466071/150‑1 (MQ=255) cGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATc < 1:1416028/150‑1 (MQ=255) gaAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATcaca < 2:4033122/150‑1 (MQ=255) gaAGTCACTTTCTGTTGTTATTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACACCAGCACCGACTGCCAACAATCCTTCAAAcaca > 2:689927/1‑150 (MQ=255) aaGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACaa < 1:3800094/150‑1 (MQ=255) aaGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACaa > 1:3120317/1‑150 (MQ=255) cACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACAt < 1:2344554/150‑1 (MQ=255) tttCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGTTGTGTCATCAAGACAAAAGAATGTGAATACCCCAGCACCTACTTCCAACAATCCTTCAATCACAAACATCCa < 1:1175213/150‑1 (MQ=255) ttCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAg > 2:1249050/1‑150 (MQ=255) tgttgtTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAAc < 1:4711932/150‑1 (MQ=255) gttgttCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAAcc < 1:1856828/150‑1 (MQ=255) gttgttCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAAcc < 1:2553648/150‑1 (MQ=255) ttcttcACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGcc > 1:1478712/1‑150 (MQ=255) tcttcACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCg > 2:3661445/1‑150 (MQ=255) cttcACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCgg > 2:4744715/1‑150 (MQ=255) cttcACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCgg > 2:1166684/1‑150 (MQ=255) | TTTTGTTCCCAGCAATGCCGCAACCTGGGTCGGCAGGAAGAAAATTAATCCGTAAACCGCCACCTGAATGGTCAGGTAGATAATCGCTAGTTGCCAGACTCGGCCATTACGCAGCGCATCGCTCAGCCGAGAAGTCACTTTCTGTTGTTCTTCACTTGCCAGTTGATTGATAAGCAACGTTTTTTCTTGTTTACTCAGAAAACGTGCCTGCTCCGGTGTGTCATCAAGCCAAAAGAATGTGAATACCCCAGCACCGACTGCCAACAATCCTTCAATCACAAACATCCAGAACCAGCCGG > CP009273/2352816‑2353114 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |