| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,387,701 | C→A | 6.2% | M275I (ATG→ATT) | nuoL ← | NADH:ubiquinone oxidoreductase, membrane subunit L |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,387,701 | 0 | C | A | 6.2% | 1146.4 / 32.2 | 289 | M275I (ATG→ATT) | nuoL | NADH:ubiquinone oxidoreductase, membrane subunit L |
| Reads supporting (aligned to +/- strand): ref base C (130/141); new base A (9/9); total (139/150) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 301 total aligned reads displayed.
CGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTACCGACCGC > CP009273/2387553‑2387850 | cGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGtca > 2:4416765/1‑150 (MQ=255) cAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGtcatca < 2:4926399/150‑1 (MQ=255) aGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAgg < 2:1083643/150‑1 (MQ=255) gcgcGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGa < 1:1227997/150‑1 (MQ=255) cgcgAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGaa > 2:2549602/1‑150 (MQ=255) cgcgAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGaa < 1:4694299/150‑1 (MQ=255) cgcgAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGaa < 1:5130009/150‑1 (MQ=255) cgAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACa < 1:2323537/150‑1 (MQ=255) gAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc < 1:2822309/150‑1 (MQ=255) gAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc < 1:4894234/150‑1 (MQ=255) gAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGcc < 2:1035275/150‑1 (MQ=255) gTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGt < 1:1045758/150‑1 (MQ=255) aGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTAc < 1:1674125/150‑1 (MQ=255) ccAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACgg < 1:3507530/150‑1 (MQ=255) cAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACggg < 1:4367440/150‑1 (MQ=255) aaTCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGc < 2:1485290/150‑1 (MQ=255) ggCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCa < 2:1833761/150‑1 (MQ=255) cTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAgg < 1:2037616/150‑1 (MQ=255) tCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGt > 2:4497514/1‑150 (MQ=255) tGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGa > 1:2222150/1‑150 (MQ=255) tGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGa > 2:2156802/1‑150 (MQ=255) tAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTCCGGGCGATCCGGTAGacac > 2:3777441/1‑150 (MQ=255) agTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcg < 1:535287/150‑1 (MQ=255) agTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcg < 1:2132551/150‑1 (MQ=255) tAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTAATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCcgcg > 1:401628/1‑150 (MQ=255) aaGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCgg > 2:526849/1‑150 (MQ=255) aGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGt > 1:4243840/1‑150 (MQ=255) cGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTa > 1:2741203/1‑150 (MQ=255) gagaACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTAc > 2:3909763/1‑150 (MQ=255) gagaACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTAc > 1:680799/1‑150 (MQ=255) gaACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCa < 2:1271395/150‑1 (MQ=255) aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCAt > 2:3620316/1‑150 (MQ=255) aaCACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCAt < 1:2984233/150‑1 (MQ=255) acacGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATg > 2:488565/1‑150 (MQ=255) acacGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATg > 1:1389367/1‑150 (MQ=255) cacGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATgg > 2:4253193/1‑150 (MQ=255) cacGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATgg < 2:3169781/150‑1 (MQ=255) cGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTAATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGtt < 1:4487384/150‑1 (MQ=255) gTTTGAGGTCGGTCTGGACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCCCCAGATGCAGAACTTCCGGCGTCATCAGGCACAGGCCGTGGGTACGGGCGATCAGGTAGACCCCCGCGGTTACCATGGTTg < 2:4604973/150‑1 (MQ=255) ttGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTgcg > 2:2686081/1‑150 (MQ=255) ttGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTgcg < 1:2693245/150‑1 (MQ=255) aTGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTgcggcg < 1:2937952/150‑1 (MQ=255) cGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGa > 1:2908158/1‑150 (MQ=255) cGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGa > 1:479174/1‑150 (MQ=255) tCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCa > 2:1310497/1‑150 (MQ=255) tGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAgc < 2:2773911/150‑1 (MQ=255) gTACCAGCGCGGCAAAACCGGACAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGTCGAGGAGCAgag > 2:1209778/1‑148 (MQ=255) tACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAgcgc > 1:18286/1‑150 (MQ=255) ccAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCgg > 2:485629/1‑150 (MQ=255) cAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGga > 2:4319246/1‑150 (MQ=255) aGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGgag < 1:246993/150‑1 (MQ=255) aGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTAATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGgag > 1:1601325/1‑150 (MQ=255) gcgcGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGgaga < 2:1646355/150‑1 (MQ=255) gcgGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACa < 2:618924/150‑1 (MQ=255) gcgGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACa < 1:4770111/150‑1 (MQ=255) gCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGc > 1:4570421/1‑150 (MQ=255) aaaaCCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGt > 1:2148622/1‑150 (MQ=255) ggCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGcc < 1:3619918/150‑1 (MQ=255) gCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGccc > 2:4069143/1‑150 (MQ=255) agcagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGcc < 1:4310593/150‑1 (MQ=255) agcagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGcc < 1:4639332/150‑1 (MQ=255) agcagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGGCGGGCCCGcc > 1:1285458/1‑150 (MQ=255) gcagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCa < 1:3132377/150‑1 (MQ=255) gcagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCa < 1:191002/150‑1 (MQ=255) cagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCAt < 2:192752/150‑1 (MQ=255) cagcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCAt < 1:3392644/150‑1 (MQ=255) agcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATc > 1:3002017/1‑150 (MQ=255) agcagcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATc < 1:3048442/150‑1 (MQ=255) agcGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATcgcg > 1:4184015/1‑150 (MQ=255) cGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTc < 1:1967166/150‑1 (MQ=255) gTACCCGCCCCGACACTACCCACCAGAGGCAGAACTTCCGGCGTCATCAGGAACAGGCCGGGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCg < 2:4773166/150‑1 (MQ=255) gTAACCGCCCCGACAAGACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCg < 2:2844884/150‑1 (MQ=255) aCCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCa < 1:4991331/150‑1 (MQ=255) aCCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCa > 2:3514941/1‑150 (MQ=255) gCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCCTCGCGTCGGCAAGc > 2:4266040/1‑150 (MQ=255) ccccGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGcc > 2:1870328/1‑150 (MQ=255) ccccGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGcc < 1:840734/150‑1 (MQ=255) cGACAATACCCACCAGATGCAGAACTTCCGGCGTAATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATg > 2:813112/1‑150 (MQ=255) aCAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTc < 1:742443/150‑1 (MQ=255) cAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCt < 1:1799809/150‑1 (MQ=255) tACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCa > 1:3267078/1‑150 (MQ=255) tACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCa < 2:1099888/150‑1 (MQ=255) cccACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAAc < 1:256983/150‑1 (MQ=255) caccaGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACgg < 2:233305/150‑1 (MQ=255) accaGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGc < 1:2949254/150‑1 (MQ=255) ccaGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCa < 2:3409670/150‑1 (MQ=255) tGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTgc > 2:2149461/1‑150 (MQ=255) gCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTgcg > 1:3690650/1‑150 (MQ=255) cAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTgcgc > 2:2035088/1‑150 (MQ=255) cAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTgcgc > 2:5076400/1‑150 (MQ=255) aGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCa > 1:3556840/1‑150 (MQ=255) aGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCa > 1:3301074/1‑150 (MQ=255) gAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAg < 2:396795/150‑1 (MQ=255) ccGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTac > 2:4565499/1‑150 (MQ=255) cGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgac > 1:2431878/1‑150 (MQ=255) cGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgac > 1:1082625/1‑150 (MQ=255) cGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgac > 1:3176119/1‑150 (MQ=255) cGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgac > 2:1789430/1‑150 (MQ=255) gTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgacc < 2:3760113/150‑1 (MQ=255) tcatcaGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTaccgaccg > 2:3870494/1‑150 (MQ=255) | CGCCAAGCGCGAGGAACATGTAGCCAATCTGGCTCATGGTAGAGTAAGCGAGAACACGTTTGATGTCGGTCTGTACCAGCGCGGCAAAACCGGCCAGCAGCAGCGTAACCGCCCCGACAATACCCACCAGATGCAGAACTTCCGGCGTCATCAGGAACAGGCCGTGGGTACGGGCGATCAGGTAGACACCCGCGGTTACCATGGTTGCGGCGTGGATCAGCGCGGAGACAGGCGTCGGGCCCGCCATCGCGTCGGCAAGCCATGTCTGCAACGGCAACTGCGCAGATTTACCGACCGC > CP009273/2387553‑2387850 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |