| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,394,288 | C→A | 9.2% | L249L (CTG→CTT) | nuoF ← | NADH:ubiquinone oxidoreductase, chain F |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,394,288 | 0 | C | A | 9.2% | 1077.4 / 54.3 | 292 | L249L (CTG→CTT) | nuoF | NADH:ubiquinone oxidoreductase, chain F |
| Reads supporting (aligned to +/- strand): ref base C (126/139); new base A (18/9); total (144/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
Only 100 of 294 total aligned reads displayed.
AAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTGGCT > CP009273/2394139‑2394436 | aaGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATc < 2:4846805/150‑1 (MQ=255) agtcCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCCCAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCtt < 1:2847207/150‑1 (MQ=255) agtcCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCtt < 1:3529590/150‑1 (MQ=255) gtcCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTg < 2:4952844/150‑1 (MQ=255) tcCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTgg > 2:2564383/1‑150 (MQ=255) ccccGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGt < 1:699054/150‑1 (MQ=255) cgccgcCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGAGTGTTCACCCGACCGGAGAAGCCCAGCAGCTTGGTGCCAg > 2:3648038/1‑150 (MQ=255) gccgccTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGc < 2:2992405/150‑1 (MQ=255) ccgccTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCa < 2:1952421/150‑1 (MQ=255) cTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATTCCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCtt < 2:2069696/150‑1 (MQ=255) cTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCtt > 1:2910068/1‑150 (MQ=255) gCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTAc < 1:1900918/150‑1 (MQ=255) tGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACtt > 1:4063330/1‑150 (MQ=255) tGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACtt > 1:3983611/1‑150 (MQ=255) gCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACttt < 2:3384298/150‑1 (MQ=255) cAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTc < 1:3021848/150‑1 (MQ=255) cAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTc < 1:1842896/150‑1 (MQ=255) cAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTc < 2:1239464/150‑1 (MQ=255) gCTTTAAATTTCAGACCATCACGCATACCACCGTCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCTGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCATCTTGGTGCCAGCATCTTTACTTTTCgtg < 1:1929082/150‑3 (MQ=255) gCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCgag > 2:1402191/1‑150 (MQ=255) gCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCgag < 2:787983/150‑1 (MQ=255) gCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCgag < 1:2420736/150‑1 (MQ=255) cTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCgaga < 2:1009919/150‑1 (MQ=255) tttAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGAt > 1:2968812/1‑150 (MQ=255) ttAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATg > 2:2178339/1‑150 (MQ=255) tAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGt < 1:3213920/150‑1 (MQ=255) tAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGt > 1:4630842/1‑150 (MQ=255) tAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGt > 1:2076257/1‑150 (MQ=255) aaaTTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGtt < 1:1445846/150‑1 (MQ=255) ttCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGa < 1:2157878/150‑1 (MQ=255) cAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATa < 2:1663091/150‑1 (MQ=255) aGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATAc > 2:4085451/1‑150 (MQ=255) gACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATAcc < 2:3347259/150‑1 (MQ=255) gACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATAcc < 1:1967870/150‑1 (MQ=255) aCCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCa < 2:4668505/150‑1 (MQ=255) cATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACt > 1:113964/1‑150 (MQ=255) gNATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGACCGGCAGGNCCCACAGGCCCGGATTTTTCCCCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGNAGCTTTACTTTTNGAGATGTTCTGNTACCACTCCACGc > 1:338824/1‑150 (MQ=255) cATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGcc > 2:2709807/1‑150 (MQ=255) aTACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCGGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCg > 1:4871754/1‑150 (MQ=255) accaccGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGtt < 1:2262368/150‑1 (MQ=255) ccaccGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTa < 2:4337719/150‑1 (MQ=255) ccaccGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTa > 2:2451707/1‑150 (MQ=255) ccGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCg > 1:918388/1‑150 (MQ=255) gTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGAt > 1:3851818/1‑150 (MQ=255) tAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATc < 1:540206/150‑1 (MQ=255) tAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATc > 2:214402/1‑150 (MQ=255) cTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCg > 2:2247456/1‑150 (MQ=255) cTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCg > 2:4082682/1‑150 (MQ=255) cTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTGTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCg > 2:4082596/1‑150 (MQ=255) tCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGa < 2:2630380/150‑1 (MQ=255) cGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGaa > 2:282870/1‑150 (MQ=255) cGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGaa > 2:4379703/1‑150 (MQ=255) gATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGtt < 1:1722464/150‑1 (MQ=255) tcGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTacac > 1:4559535/1‑150 (MQ=255) cgcgTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTAcaca < 2:447446/150‑1 (MQ=255) cgTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAgg < 2:3453990/150‑1 (MQ=255) cgTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAgg < 2:5057630/150‑1 (MQ=255) cgTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAgg < 1:2538591/150‑1 (MQ=255) gTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAggg < 1:2191423/150‑1 (MQ=255) gTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAggg > 2:2927962/1‑150 (MQ=255) tGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGt < 1:2029444/150‑1 (MQ=255) gtggtgCCGAACGGCAGTTCCCTCAGTCCCTGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCTGAACGTTACTCAGGGTTTct < 2:4361720/150‑2 (MQ=255) ggtgCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGAc < 1:4187899/150‑1 (MQ=255) ggtgCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTCTCGAc > 1:1496226/1‑150 (MQ=255) ggtgCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGACCATCAGATTGGTTCCAGCATCTTTACTTTTCGATATGTTCTGATACCACTCCACTCCTTTAGCGAGGATCGCCGGAACTTTACACAGGGTTTCGAc < 1:1323895/150‑1 (MQ=255) aaCGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGttgttg > 1:3706693/1‑150 (MQ=255) aCGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGa > 2:1089573/1‑150 (MQ=255) cAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGAcaca > 1:1986443/1‑150 (MQ=255) aGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAg > 2:4239491/1‑150 (MQ=255) cccACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCg < 1:4299448/150‑1 (MQ=255) ccACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGATACAGGTCgg > 2:4555777/1‑150 (MQ=255) ccACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCgg < 2:3534542/150‑1 (MQ=255) acaGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGtt < 1:1636173/150‑1 (MQ=255) acaGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGtt < 2:2034730/150‑1 (MQ=255) acaGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGtt < 2:3223419/150‑1 (MQ=255) acaGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGtt > 1:4536041/1‑150 (MQ=255) tCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTAcc < 2:5108346/150‑1 (MQ=255) tCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTAcc > 2:185888/1‑150 (MQ=255) tttttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCTTgcg < 2:1335893/150‑1 (MQ=255) tttttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATgcg < 1:4355090/150‑1 (MQ=255) tttttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATgcg < 1:2378263/150‑1 (MQ=255) tttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGcc < 1:2697141/150‑1 (MQ=255) tttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGcc > 1:3476679/1‑150 (MQ=255) ttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCg > 1:2120213/1‑150 (MQ=255) ttCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCg < 2:2248958/150‑1 (MQ=255) aCCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAg < 1:2377489/150‑1 (MQ=255) gACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTg < 1:1551331/150‑1 (MQ=255) ccGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGcc > 2:3869990/1‑150 (MQ=255) ccGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGcc > 1:49929/1‑150 (MQ=255) cGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCg > 2:4144721/1‑150 (MQ=255) ggAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCgg > 1:3920618/1‑150 (MQ=255) gaAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGaa > 1:4453355/1‑150 (MQ=255) gaAGCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGaa > 1:2733153/1‑150 (MQ=255) gCCCATAAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAggg < 1:1042499/150‑1 (MQ=255) ccATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTg < 2:904492/150‑1 (MQ=255) ccATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTg < 2:3417234/150‑1 (MQ=255) cATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTgg > 1:4780036/1‑150 (MQ=255) aTCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTGGc < 1:826495/150‑1 (MQ=255) aTCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTGGc < 1:3957525/150‑1 (MQ=255) tCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTGGCt > 1:1653165/1‑150 (MQ=255) | AAGTCAGTCCCCGCGCCGCCTGGCTGCCAGGCTTTAAATTTCAGACCATCACGCATACCACCGGCGTAATCTTCGAGGATCTCGCGTGCGGTGGTGCCGAACGGCAGTTCCCACAGTCCCGGATTTTTCACCCGACCGGAGAAGCCCATCAGCTTGGTGCCAGCATCTTTACTTTTCGAGATGTTCTGATACCACTCCACGCCGTTAGCGAGGATCGCCGGAACGTTACACAGGGTTTCGACGTTGTTGACACAGGTCGGTTTACCCCATGCGCCGGAGGTTGCCGGGAAGGGTGGCT > CP009273/2394139‑2394436 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |