Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 3,363,149 | C→A | 6.1% | A187A (GCG→GCT) | nanK ← | N‑acetylmannosamine kinase |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 3,363,149 | 0 | C | A | 6.1% | 1208.0 / 33.1 | 308 | A187A (GCG→GCT) | nanK | N‑acetylmannosamine kinase |
Reads supporting (aligned to +/- strand): ref base C (160/129); new base A (11/8); total (171/137) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.89e-01 |
Only 100 of 338 total aligned reads displayed.
ACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAGCCGCTCAC > CP009273/3363000‑3363298 | gCACGGGCAATCAGTTGTGGCTTTAATATCCGCGATCCGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTgcgc < 2:1134641/150‑1 (MQ=255) cACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGcgct < 1:4687985/150‑1 (MQ=255) aCTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGagctg < 2:3083878/150‑1 (MQ=255) cAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGcgctgccgct < 2:4578753/150‑1 (MQ=255) tCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCa > 2:1947061/1‑150 (MQ=255) aGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCCACTCCCCCTGCGCTGCCGCTGCAAt > 2:1117440/1‑150 (MQ=255) gTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATg > 2:682091/1‑150 (MQ=255) gTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATg < 1:2465370/150‑1 (MQ=255) tgtgGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGcc < 2:3120305/150‑1 (MQ=255) gtgGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCcg < 2:4033577/150‑1 (MQ=255) tttAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGAcc > 2:1060484/1‑150 (MQ=255) ttAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCa < 1:783520/150‑1 (MQ=255) tAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAg > 1:1071978/1‑150 (MQ=255) tatCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAg < 2:1589053/150‑1 (MQ=255) tatCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAg > 1:4738499/1‑150 (MQ=255) cGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCg > 2:745258/1‑150 (MQ=255) cGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCg > 2:3336006/1‑150 (MQ=255) cGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGATGCAGCTGCAATGCCGCGACCAGAAGCAATCg > 2:3407972/1‑150 (MQ=255) gATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGc > 2:3065312/1‑150 (MQ=255) tCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCtt < 1:1737812/150‑1 (MQ=255) cAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTc < 1:116651/150‑1 (MQ=255) aGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTcc > 2:3905919/1‑150 (MQ=255) aGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTcc < 1:2136482/150‑1 (MQ=255) aGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTcc < 2:3153357/150‑1 (MQ=255) tGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCa > 1:2711697/1‑150 (MQ=255) cAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAAc > 2:1816196/1‑150 (MQ=255) cAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAAc > 2:1762030/1‑150 (MQ=255) aGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCt < 1:603312/150‑1 (MQ=255) aGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCt > 1:2871136/1‑150 (MQ=255) aCGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCg > 2:2550150/1‑150 (MQ=255) aCGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCg > 2:1823600/1‑150 (MQ=255) gTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTc < 2:3218369/150‑1 (MQ=255) gTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCCCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTc > 1:654493/1‑150 (MQ=255) tGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTcc > 2:1906076/1‑150 (MQ=255) ggAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCcaca < 1:4405615/150‑1 (MQ=255) gAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAg > 1:2339352/1‑150 (MQ=255) gAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACACTTCCCCGCGCGCGTGAAAATAGTTTTCTAATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAg > 2:2092503/1‑150 (MQ=255) cGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCg < 1:2232585/150‑1 (MQ=255) gTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCa > 1:5095834/1‑150 (MQ=255) tGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAg > 1:1350444/1‑150 (MQ=255) aaTCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGAc > 1:4657864/1‑150 (MQ=255) aaTCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGAc < 2:2852059/150‑1 (MQ=255) aaTCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGAc < 1:2168346/150‑1 (MQ=255) aTCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACt < 1:2794795/150‑1 (MQ=255) ctgctgCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGcc < 1:4910525/150‑1 (MQ=255) tgctgcGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCg > 2:4281465/1‑150 (MQ=255) tgcGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCgtgt < 1:3299804/150‑1 (MQ=255) gcgcCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGtgtg < 2:3802039/150‑1 (MQ=255) gcgcCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGtgtg > 1:3253717/1‑150 (MQ=255) gcgcCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGtgtg > 1:3254166/1‑150 (MQ=255) cgcCTGCTCGTCACCCCGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTgg < 1:4451461/150‑1 (MQ=255) gCTCGTCACCCGGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCgg < 1:2972485/150‑1 (MQ=255) cTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGc < 2:4889495/150‑1 (MQ=255) cTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGc > 1:2098330/1‑150 (MQ=255) cTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGc < 2:1191072/150‑1 (MQ=255) tCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCa < 1:4967633/150‑1 (MQ=255) tCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCa > 1:3971433/1‑150 (MQ=255) gTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAg < 2:2310979/150‑1 (MQ=255) gTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAg > 2:2845069/1‑150 (MQ=255) tCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCGGACTGGGCCGTGTGGATCGGCAAGc < 1:1088183/150‑1 (MQ=255) caaccTTCCCGGAGCGCGAGAAAATATTTTTCGCATCAGCGCAATCCAACTAAAACTTCGCTGACGATGAAATGCAGCGACCAGAAGCAATCGCTTACACGCAAACTGTGCGACCACAGCCGCAGACTGGGCCGAGAGGATCGGCAAGCg > 2:4131993/4‑150 (MQ=255) cACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCg < 1:3027199/150‑1 (MQ=255) cACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCg < 2:536510/150‑1 (MQ=255) cACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCg > 2:2465255/1‑150 (MQ=255) cccTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTa > 1:2552796/1‑150 (MQ=255) ccTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTAt < 1:1015491/150‑1 (MQ=255) ccTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTAt < 2:4718114/150‑1 (MQ=255) ggCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGat > 2:1493691/1‑150 (MQ=255) gcgcgcGTGAAAAGAGTGTGCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCGGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACCGCCGCAGACTGGGCCGTGTGGATCGGCCAGCGTATGCCCGata < 2:2233162/150‑1 (MQ=255) cgcgTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGc > 2:3618612/1‑150 (MQ=255) gcgTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGAGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGcc < 2:2154282/150‑1 (MQ=255) cgTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGccc > 1:432144/1‑150 (MQ=255) gTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGcccc > 2:1555474/1‑150 (MQ=255) tGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCg > 1:1522101/1‑150 (MQ=255) tGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCg < 1:3076707/150‑1 (MQ=255) aaaaTAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGcc > 1:3906931/1‑150 (MQ=255) aaaTAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCa < 1:1568389/150‑1 (MQ=255) aTAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCACTCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCACGCGTATGCCCGATATGCCCCGCCAGa > 2:2734317/1‑150 (MQ=255) aTAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGa > 2:1423712/1‑150 (MQ=255) aTAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGa > 2:3511864/1‑150 (MQ=255) tAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGAc > 2:1735743/1‑150 (MQ=255) gTTTTCGCATCCGCGCCAGCCAACTCCCCCGGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCGACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGTTATGCCCCGCCAGACCg < 2:1629443/150‑1 (MQ=255) ttCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCa > 1:3736079/1‑150 (MQ=255) ccGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCgg < 2:654493/150‑1 (MQ=255) cgcgCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGt > 2:5120650/1‑150 (MQ=255) gcgcCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTa < 2:3951159/150‑1 (MQ=255) cgcCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTaa < 1:5142319/150‑1 (MQ=255) gccagccaACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAg < 1:1354376/150‑1 (MQ=255) ccagccaACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGc > 1:3589096/1‑150 (MQ=255) cagccaACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCa < 2:1709668/150‑1 (MQ=255) agccaACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAg < 1:3181544/150‑1 (MQ=255) aaCTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTg > 2:4670428/1‑150 (MQ=255) aaCTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTg > 2:3956326/1‑150 (MQ=255) aCTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGc < 1:383810/150‑1 (MQ=255) cTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCa > 2:2348230/1‑150 (MQ=255) tCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAg > 2:2443570/1‑150 (MQ=255) cccccTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAGc > 2:3699602/1‑150 (MQ=255) ccccTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAGcc > 1:3117296/1‑150 (MQ=255) ccTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCACCCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATCTGCCCCGCCAGACCGCCAGGGCCGGTCAGCCGTGTGCAGCCGc > 2:4425908/1‑150 (MQ=255) cgctgccgctgcAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAGCCGCTCAc < 2:3854667/150‑1 (MQ=255) | ACGCACTGGCAATCAGTTGTGGCTTTAATATCAGCGATCAGCCTTGCAAGCGTACGTGCGGAGCGGTGAATCAGCTGCTGCGCCTGCTCGTCACCCTGCCCGGCGCGCGTGAAAATAGTTTTCGCATCCGCGCCAGCCAACTCCCCCTGCGCTGCCGCTGCAATGCCGCGACCAGAAGCAATCGCTTCCACGCAACCTGTGCGTCCACAGCCGCAGACTGGGCCGTGTGGATCGGCAAGCGTATGCCCGATATGCCCCGCCAGACCGCCAGGGCCGGTAAGCAGTTTGCAGCCGCTCAC > CP009273/3363000‑3363298 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |