| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,386,672 | C→A | 23.3% | P982P (CCG→CCT) | yhdP ← | DUF3971‑AsmA2 domains protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,386,672 | 0 | C | A | 23.3% | 844.4 / 201.2 | 333 | P982P (CCG→CCT) | yhdP | DUF3971‑AsmA2 domains protein |
| Reads supporting (aligned to +/- strand): ref base C (124/131); new base A (36/42); total (160/173) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 338 total aligned reads displayed.
GTATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGCC > CP009273/3386523‑3386821 | gTATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTc < 1:1909655/150‑1 (MQ=255)gTATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAACGCGCTCCGTTGTc < 2:4797798/150‑1 (MQ=255) tATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCg < 2:5096336/150‑1 (MQ=255) tcaatcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGTGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAggg < 2:4279978/150‑1 (MQ=255) caatcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGa > 1:4608262/1‑150 (MQ=255) atcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGaaa > 2:3791994/1‑150 (MQ=255) atcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGaaa > 2:4041894/1‑150 (MQ=255) atcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGaaa > 2:3318021/1‑150 (MQ=255) tcaGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAg > 2:1885023/1‑150 (MQ=255) caGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAgg > 2:3345271/1‑150 (MQ=255) aGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGt < 2:1934047/150‑1 (MQ=255) aGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGt > 2:2392767/1‑150 (MQ=255) gTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGtg > 1:200818/1‑150 (MQ=255) tCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGtga < 1:434188/150‑1 (MQ=255) cATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGtgatg < 1:1500873/150‑1 (MQ=255) ttGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGACAGGTGATGAc > 2:1522556/1‑150 (MQ=255) tGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACg > 2:2327049/1‑150 (MQ=255) tGGTCAGCGTGAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACg < 1:1375288/150‑1 (MQ=255) ggTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACgg > 1:3019282/1‑150 (MQ=255) gTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGc < 1:3080508/150‑1 (MQ=255) aGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGtt < 1:2672417/150‑1 (MQ=255) aGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGtt > 2:2932814/1‑150 (MQ=255) aGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGtt < 1:502010/150‑1 (MQ=255) gCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTg < 2:3625233/150‑1 (MQ=255) gTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGaa > 1:4416708/1‑150 (MQ=255) aaCGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATca > 1:1280541/1‑150 (MQ=255) aCGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATcac > 1:2442990/1‑150 (MQ=255) aCGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATcac > 1:2443124/1‑150 (MQ=255) aCGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATcac > 1:3957431/1‑150 (MQ=255) cGTATCGCCAGAAATGGTGATATCACTGTCAAAGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGGATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGGTGTCGGGAAAGGTGATGACGGCGTAGAATcacc > 2:1776594/1‑150 (MQ=255) aTCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACg < 2:1648987/150‑1 (MQ=255) tCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGa > 2:3990511/1‑150 (MQ=255) cGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAg < 1:1161393/150‑1 (MQ=255) cGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAg > 2:4146325/1‑150 (MQ=255) gCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGt > 1:3835842/1‑150 (MQ=255) gCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGt < 2:923644/150‑1 (MQ=255) ccAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGtt > 2:3283654/1‑150 (MQ=255) cAGAAATGGTGAGCTCACGGTCCATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTACTGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGttt < 2:4480705/150‑1 (MQ=255) aGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGtttt > 2:2676004/1‑150 (MQ=255) aaaTGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCg > 2:4067911/1‑150 (MQ=255) aaTGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGc > 2:3224081/1‑150 (MQ=255) tGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCa > 1:4225082/1‑150 (MQ=255) ggTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCAc < 1:1009248/150‑1 (MQ=255) tGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGc > 2:4311606/1‑150 (MQ=255) tGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGGTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGc > 2:1734467/1‑150 (MQ=255) gATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCt > 1:3322214/1‑150 (MQ=255) tCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCggg > 2:1162624/1‑150 (MQ=255) cACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGt < 1:3733742/150‑1 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCggggt > 1:3389075/1‑148 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt > 1:2316401/1‑150 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt < 1:4023827/150‑1 (MQ=255) aCTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGtt < 2:2214881/150‑1 (MQ=255) tGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGt > 1:835726/1‑150 (MQ=255) tGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGt < 1:1082811/150‑1 (MQ=255) cAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaat > 2:617408/1‑150 (MQ=255) aTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaataa < 1:3655156/150‑1 (MQ=255) aTGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGtaataa > 2:2080719/1‑150 (MQ=255) tGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATaaa > 1:1552177/1‑150 (MQ=255) gCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAg > 2:3908753/1‑150 (MQ=255) gCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAg < 2:3068452/150‑1 (MQ=255) ccGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGatat < 2:744035/150‑1 (MQ=255) gAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATAttt > 1:2267696/1‑150 (MQ=255) aTTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGa < 2:678265/150‑1 (MQ=255) aTTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGa < 2:1342181/150‑1 (MQ=255) tttGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGatat > 1:2913880/1‑150 (MQ=255) cccAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgcca < 1:4558252/150‑1 (MQ=255) cAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagc > 1:2223462/1‑150 (MQ=255) aGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcc > 2:3958274/1‑150 (MQ=255) gAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCgccagcca > 2:1608739/1‑150 (MQ=255) aaCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCAc < 1:1711724/150‑1 (MQ=255) aCCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACg > 1:72265/1‑150 (MQ=255) cAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGgc < 1:1774925/150‑1 (MQ=255) aGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGgcg < 2:1990728/150‑1 (MQ=255) cACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGcgcg < 1:5148394/150‑1 (MQ=255) aCTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGt > 1:2872599/1‑150 (MQ=255) tctGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGtta > 2:1792232/1‑150 (MQ=255) ctGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGttat < 2:4913509/150‑1 (MQ=255) tgCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTAc < 1:3375475/150‑1 (MQ=255) tgCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTAc < 2:838255/150‑1 (MQ=255) tgCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTAc < 2:1422081/150‑1 (MQ=255) aTCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCa < 2:1124228/150‑1 (MQ=255) cGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATc < 1:2756228/150‑1 (MQ=255) gTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCg > 2:158132/1‑150 (MQ=255) ttGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAg < 1:3240011/150‑1 (MQ=255) gggCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCg < 2:4627054/150‑1 (MQ=255) gCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTg < 1:3345299/150‑1 (MQ=255) cGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTgg < 2:1292343/150‑1 (MQ=255) cGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGtt > 1:3890954/1‑150 (MQ=255) cGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGtt > 1:5059212/1‑150 (MQ=255) cGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGtt > 2:1397565/1‑150 (MQ=255) ccagccaCGGAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGAt < 1:4864831/150‑1 (MQ=255) ggAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGcc > 1:4772829/1‑150 (MQ=255) ggAAGTTAATGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGcc > 2:3442238/1‑150 (MQ=255) tAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTgcg > 2:3508076/1‑150 (MQ=255) aTGCGCTCCGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCt < 2:2316296/150‑1 (MQ=255) cgcTCCGTTGGAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTACTAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCa < 2:3680124/150‑1 (MQ=255) ccGTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCa < 1:685936/150‑1 (MQ=255) gTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGGAATTACGCTTCGCTATCGTGGCGTGGAATGCACTCACTTGCGGAACAACCAgg > 2:2723165/1‑150 (MQ=255) gTTGTAGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAgg > 1:4075359/1‑150 (MQ=255) cGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGcc < 1:3966324/150‑1 (MQ=255) | GTATCAATCAGTCCATTGGTCAGCGTTAACGTATCGCCAGAAATGGTGATATCACTGTCAATGCGACCGAATTTTTGCCCCCAGAACCAGCACTCTGTGCATCGTATTTGGGCGTCCGGCCAGCCACGGAAGTTAATGCGCTCCGTTGTCGGGAAAGGTGATGACGGCGTTGAATCACCACGAGTTTTCGCCACGCTCGGGTTGTAATAAAGATATTTGATATTCGCCAGCCACGGCGCGTTATTACGCATCGCTAGCGTGGCGTTGATTTCACGCCCTTGCGCTTCAACCAGGGTGCC > CP009273/3386523‑3386821 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |