| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,437,638 | G→T | 20.9% | G87G (GGC→GGA) | rplO ← | 50S ribosomal subunit protein L15 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,437,638 | 0 | G | T | 20.9% | 848.7 / 158.0 | 322 | G87G (GGC→GGA) | rplO | 50S ribosomal subunit protein L15 |
| Reads supporting (aligned to +/- strand): ref base G (131/120); new base T (44/25); total (177/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 322 total aligned reads displayed.
TTCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTC > CP009273/3437491‑3437785 | agcagcACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTAc > 2:1279576/1‑150 (MQ=255) agcagcACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTAc > 1:1004071/1‑150 (MQ=255) gcagcaCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACt < 1:3284674/150‑1 (MQ=255) gcagcaCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACt < 1:1486524/150‑1 (MQ=255) cagcaCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACtt > 1:539391/1‑150 (MQ=255) gcaCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTa < 1:1873394/150‑1 (MQ=255) aCGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATATGGATACCGATAATGTTAGCCGCATTCAGCGTGTTAAGGAATACAACAACTACTTCTACTTTAGc > 2:2651235/1‑150 (MQ=255) gAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCa < 2:4689319/150‑1 (MQ=255) ccTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTca < 1:2008024/150‑1 (MQ=255) cTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACATTAGCGAACACGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCGTCTACTTTATCCAGGTcag > 1:2621024/1‑150 (MQ=255) tttAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTcaga < 2:1940728/150‑1 (MQ=255) ttAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTcagac < 2:5086447/150‑1 (MQ=255) aGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTcagacag < 1:3934615/150‑1 (MQ=255) gTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTcagacaga > 2:2582226/1‑150 (MQ=255) tAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGGGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCagacagac > 2:4389257/1‑150 (MQ=255) acGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAt > 1:2509729/1‑150 (MQ=255) acGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAt > 1:822297/1‑150 (MQ=255) tcAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTATACTTTAGCCAGGTCAGACAGACGAAttt < 1:2703134/149‑1 (MQ=255) gCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAttt > 1:3191576/1‑150 (MQ=255) cAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTc > 2:4319676/1‑150 (MQ=255) cAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTc > 2:1759731/1‑150 (MQ=255) aGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCg > 2:1644443/1‑150 (MQ=255) aGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAATTCg > 1:3413820/1‑150 (MQ=255) ggCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCgg < 1:4343682/150‑1 (MQ=255) gCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACGACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGc > 1:1425617/1‑150 (MQ=255) ccACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCt < 2:3706594/150‑1 (MQ=255) cACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACACGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTATACTTTAGCCAGGTCAGACAGACGAATTTCGGCTg > 1:193969/1‑150 (MQ=255) gAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTaa > 2:2746401/1‑150 (MQ=255) cAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCg < 1:2423915/150‑1 (MQ=255) aGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgc > 2:1098382/1‑150 (MQ=255) ttACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgctg > 1:1726992/1‑150 (MQ=255) aCCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCgctgct > 2:4350921/1‑150 (MQ=255) aCCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTAGGCTGTAATCgctgct > 1:3119717/1‑150 (MQ=255) aGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACg > 2:412940/1‑150 (MQ=255) gTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACga < 1:4261107/150‑1 (MQ=255) gTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACga < 1:2953705/150‑1 (MQ=255) ttACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAg > 2:1155556/1‑150 (MQ=255) tACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGt < 1:3633511/150‑1 (MQ=255) ttCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGaa > 2:739730/1‑150 (MQ=255) ttCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGaa < 1:2283151/150‑1 (MQ=255) ttCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGaa < 2:31037/150‑1 (MQ=255) cagccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGa > 2:4182331/1‑150 (MQ=255) agccagGATCACTTTCGCTAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTATCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGaa > 2:2846646/1‑150 (MQ=255) agccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGaa < 2:1487643/150‑1 (MQ=255) gccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAAt < 1:412940/150‑1 (MQ=255) gccagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAAt > 1:873006/1‑150 (MQ=255) cagGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAAttt > 1:2102268/1‑150 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc > 2:3472539/1‑150 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc < 1:1114863/150‑1 (MQ=255) agGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTc < 2:1365382/150‑1 (MQ=255) ggATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCg < 1:4372209/150‑1 (MQ=255) gATCACTTTCGCGAACTCGATCTGGATACCGATCATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCgg > 1:4033635/1‑150 (MQ=255) aCTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAga > 1:1615814/1‑150 (MQ=255) cTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgac > 2:3209501/1‑150 (MQ=255) ttCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacga < 1:2833677/150‑1 (MQ=255) ttCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacga < 1:2992134/150‑1 (MQ=255) tCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacgac < 1:469956/150‑1 (MQ=255) tCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAgacgac > 2:1191678/1‑150 (MQ=255) gcgAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACgg > 2:3178500/1‑150 (MQ=255) gcgAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACgg > 2:4581794/1‑150 (MQ=255) gAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTa > 1:4460803/1‑150 (MQ=255) aaCTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTAc < 2:2037898/150‑1 (MQ=255) aaCTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTAc > 2:4945406/1‑150 (MQ=255) aCTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACa < 1:1073256/150‑1 (MQ=255) cGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACagag < 2:3306057/150‑1 (MQ=255) gATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg < 2:3837632/150‑1 (MQ=255) gATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAgg > 1:4899060/1‑150 (MQ=255) aTCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGc > 2:4866558/1‑150 (MQ=255) ggATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCt < 1:1427207/150‑1 (MQ=255) gATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTg > 2:780801/1‑150 (MQ=255) gATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGaccacc > 2:514586/1‑150 (MQ=255) tAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCt > 2:1580315/1‑150 (MQ=255) aaTGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTc < 2:556934/150‑1 (MQ=255) aaTGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTCCAGAGGCCTCTGACCACCCTc > 2:5027671/1‑150 (MQ=255) aGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAAcc > 1:3768617/1‑150 (MQ=255) aGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAAcc > 1:3768018/1‑150 (MQ=255) gCCGCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcg > 1:377226/1‑150 (MQ=255) ccGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgc > 1:1220629/1‑150 (MQ=255) ccGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgc > 2:1456141/1‑150 (MQ=255) cGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgcg < 1:1761609/150‑1 (MQ=255) cGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACcgcg < 1:4548521/150‑1 (MQ=255) gCTTTCAGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGa > 1:764063/1‑150 (MQ=255) gCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGa < 1:4797340/150‑1 (MQ=255) tttCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACg < 2:363778/150‑1 (MQ=255) tCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTa < 2:406771/150‑1 (MQ=255) aGCGTGTTCAGGTCTACTACACCTCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACg > 2:1555730/1‑150 (MQ=255) cGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGcc < 1:5051425/150‑1 (MQ=255) tgtTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCAc > 1:3555766/1‑150 (MQ=255) gtTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCAcc > 2:2331620/1‑150 (MQ=255) gtTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCAcc < 1:1306187/150‑1 (MQ=255) ttCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCg < 1:1882684/150‑1 (MQ=255) cAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGcc > 2:3018487/1‑150 (MQ=255) aGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCa < 1:4234532/150‑1 (MQ=255) gTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAAATTCGGCTGTAATCGCTTCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGa > 1:1344043/1‑150 (MQ=255) ctactaCACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAAc < 1:3075651/150‑1 (MQ=255) actacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACga > 2:164404/1‑150 (MQ=255) ctacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACgag > 2:931587/1‑150 (MQ=255) tacACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACgaga < 2:2368197/150‑1 (MQ=255) acCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACtt < 2:822297/150‑1 (MQ=255) ccGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTc > 1:4403673/1‑150 (MQ=255) | TTCGATAGCAGCACGAGCGCCTTTAGTAACACGCAGGCCACGAACAGTTACCGGAGTCGTTACTTCGCCAGCCAGGATCACTTTCGCGAACTCGATCTGGATACCGATAATGTTAGCCGCTTTCAGCGTGTTCAGGTCTACTACACCGCCTTCTACTTTAGCCAGGTCAGACAGACGAATTTCGGCTGTAATCGCTGCTTTACGAGAAGTGAAGCCGAATTTCGGCAGACGACGGTACAGAGGCATCTGACCACCCTCGAAACCGCGACGTACGCCACCGCCAGAACGAGACTTC > CP009273/3437491‑3437785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |