| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,440,597 | G→T | 5.1% | I67I (ATC→ATA) | rplE ← | 50S ribosomal subunit protein L5 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,440,597 | 0 | G | T | 5.1% | 1252.7 / 27.8 | 311 | I67I (ATC→ATA) | rplE | 50S ribosomal subunit protein L5 |
| Reads supporting (aligned to +/- strand): ref base G (169/126); new base T (7/9); total (176/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
Only 100 of 317 total aligned reads displayed.
AGGCCACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGTTAAACTC > CP009273/3440448‑3440743 | aGGCCACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTg > 2:3631782/1‑150 (MQ=255)aGGCCACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTg < 1:2557214/150‑1 (MQ=255) ccACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATc > 1:4349057/1‑150 (MQ=255) cACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCa < 1:1141756/150‑1 (MQ=255) cACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCa > 2:3345154/1‑150 (MQ=255) aaGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGt > 2:5002735/1‑150 (MQ=255) aaGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGt > 1:1896198/1‑150 (MQ=255) tCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGtttt < 1:4582781/150‑1 (MQ=255) aCGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTg < 1:865359/150‑1 (MQ=255) aCGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTg < 2:5089392/150‑1 (MQ=255) aCGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTg > 1:3769376/1‑150 (MQ=255) cGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGa < 2:818343/150‑1 (MQ=255) cGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGa < 2:4320508/150‑1 (MQ=255) aCGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGga > 1:2194268/1‑150 (MQ=255) aCGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGga < 2:3323958/150‑1 (MQ=255) aagtgcaCAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGgag > 2:770419/7‑150 (MQ=255) gAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGgaga > 1:2746649/1‑150 (MQ=255) gAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGgaga > 2:4524443/1‑150 (MQ=255) gAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGgaga > 2:4524565/1‑150 (MQ=255) aGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGAt < 2:3712469/150‑1 (MQ=255) aGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGAt > 1:233234/1‑150 (MQ=255) ggTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGAtt > 2:1759988/1‑150 (MQ=255) gTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATtg < 2:4737316/150‑1 (MQ=255) tACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATtgc > 2:1860391/1‑150 (MQ=255) aCAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGATtgct < 2:1939459/150‑1 (MQ=255) gCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGATTGCTGcc < 1:2669226/150‑1 (MQ=255) gCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGcc > 1:3639735/1‑150 (MQ=255) cAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCa < 2:599549/150‑1 (MQ=255) cAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCa < 1:3850660/150‑1 (MQ=255) aaTAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAg > 2:1601527/1‑150 (MQ=255) tAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGt > 1:4787396/1‑150 (MQ=255) gaGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGt < 1:3357632/149‑1 (MQ=255) aGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTc > 2:4188175/1‑150 (MQ=255) aTCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTctgct < 2:1440158/150‑1 (MQ=255) aTCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTctgct > 1:3035896/1‑150 (MQ=255) cAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTctgctgc > 2:3774616/1‑150 (MQ=255) aGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTctgctgct < 1:4502181/150‑1 (MQ=255) ggCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTTACCGGAGATTGCTGCCAGGTctgctgctg > 1:4310629/1‑150 (MQ=255) cgcTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCg > 2:1019825/1‑150 (MQ=255) aaGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATcc < 2:4563506/150‑1 (MQ=255) aGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCca < 1:986017/150‑1 (MQ=255) aaCTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCcagc > 1:1754575/1‑150 (MQ=255) cTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCcagcag < 1:317248/150‑1 (MQ=255) tCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGt > 2:3691551/1‑150 (MQ=255) ccACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGttt > 2:3878762/1‑150 (MQ=255) acaTGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGttttt > 2:4322892/1‑150 (MQ=255) acaTGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGttttt > 2:3177012/1‑150 (MQ=255) acaTGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGttttt < 1:4842261/150‑1 (MQ=255) caTGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGtttttt > 2:2545535/1‑150 (MQ=255) cGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCa < 1:1817966/150‑1 (MQ=255) cGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCa > 1:3910976/1‑150 (MQ=255) cGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCa > 2:126783/1‑150 (MQ=255) gTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCCGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAg > 1:1766765/1‑150 (MQ=255) gTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAg > 1:3544505/1‑150 (MQ=255) ttCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGc > 2:245086/1‑150 (MQ=255) ttCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGc > 1:2097301/1‑150 (MQ=255) tCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTGTGTCAGCg > 2:3446014/1‑150 (MQ=255) cGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGa < 1:604629/150‑1 (MQ=255) gCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGAt < 1:2427878/150‑1 (MQ=255) gagTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCAc < 2:2334886/150‑1 (MQ=255) aCTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAaca < 2:3404699/150‑1 (MQ=255) tACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCa > 1:4368777/1‑150 (MQ=255) aCAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCAt < 2:3900288/150‑1 (MQ=255) cAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATg > 1:1263103/1‑150 (MQ=255) gATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAg > 1:1271588/1‑150 (MQ=255) gATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAg < 2:2845412/150‑1 (MQ=255) aTCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAgg > 1:2943155/1‑150 (MQ=255) ggATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTg > 1:871875/1‑150 (MQ=255) gATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTATTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGa > 1:2310518/1‑150 (MQ=255) aTAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAt > 1:3321483/1‑150 (MQ=255) aTAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAt < 2:2055690/150‑1 (MQ=255) aTAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAt > 2:4879429/1‑150 (MQ=255) aGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAtct > 2:4936923/1‑150 (MQ=255) aGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAtct < 1:551375/150‑1 (MQ=255) ccTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGAtcttct > 1:4278155/1‑150 (MQ=255) tGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTTATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCg < 1:1638465/150‑1 (MQ=255) aCGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGAc > 1:1212448/1‑150 (MQ=255) cGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGAcc > 1:1029280/1‑150 (MQ=255) ttttGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAg < 1:1303317/150‑1 (MQ=255) tttGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAgg < 2:1093873/150‑1 (MQ=255) ttGAAGCCTGCAACAGATGTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAggg < 2:4122242/150‑1 (MQ=255) aGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACtt < 2:550372/150‑1 (MQ=255) gCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTg > 2:3245317/1‑150 (MQ=255) ccTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGc > 1:3592209/1‑150 (MQ=255) tGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCAt < 2:1506494/150‑1 (MQ=255) cAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGa > 2:1299227/1‑150 (MQ=255) aaCAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGAc < 1:2801330/150‑1 (MQ=255) aCAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACa > 2:3037273/1‑150 (MQ=255) cAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAg < 2:404798/150‑1 (MQ=255) aGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGa > 1:2853142/1‑150 (MQ=255) tttGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAAtt < 1:2252618/150‑1 (MQ=255) tttGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAAtt < 1:2252810/150‑1 (MQ=255) tttGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAAtt < 1:462818/150‑1 (MQ=255) tGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGt < 2:1211739/150‑1 (MQ=255) cGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAg > 1:4124281/1‑150 (MQ=255) tGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGtt > 1:75662/1‑150 (MQ=255) tGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGtt > 1:415321/1‑150 (MQ=255) tGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGtt > 1:4872227/1‑150 (MQ=255) gCTTTGGTGATCAGCGGTGTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGATTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGTTa < 1:4966653/150‑1 (MQ=255) tttGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGTTaaa > 2:4851891/1‑150 (MQ=255) | AGGCCACGGAAGTCACGGATACGAGGTACAGCAATAGTGATCAGGCGCTCAAAGAACTCCCACATGCGTTCGCCACGCAGAGTTACTTTACAGCCGATCGGATAGCCCTGACGGATTTTGAAGCCTGCAACAGATTTGCGTGCTTTGGTGATCAGCGGTTTTTGACCGGAGATTGCTGCCAGGTCTGCTGCTGCGTTATCCAGCAGTTTTTTGTCAGCGATCGCTTCACCAACACCCATGTTCAGGGTGATCTTCTCGACCCGAGGGACTTGCATGACAGAATTGTAGTTAAACTC > CP009273/3440448‑3440743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |