| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,550,177 | T→A | 8.5% | Q11L (CAG→CTG) | rtcA ← | RNA 3'‑terminal phosphate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,550,177 | 0 | T | A | 8.5% | 1198.1 / 73.2 | 362 | Q11L (CAG→CTG) | rtcA | RNA 3'‑terminal phosphate cyclase |
| Reads supporting (aligned to +/- strand): ref base T (155/176); new base A (18/13); total (173/189) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 374 total aligned reads displayed.
TTTCCGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTTCGTCGATCACT > CP009273/3550028‑3550326 | ttCCGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCtg < 2:3528387/150‑1 (MQ=255) tCCGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCtgt < 1:2034259/150‑1 (MQ=255) cGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTgc < 2:327121/150‑1 (MQ=255) cGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTgc < 1:430604/150‑1 (MQ=255) gccgccTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCa > 1:3484954/1‑150 (MQ=255) cgccTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATc > 2:760259/1‑150 (MQ=255) ccGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCCGCGCaa > 2:2444209/1‑150 (MQ=255) ccGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCaa > 1:145242/1‑150 (MQ=255) gcgGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAatc < 1:3673327/150‑1 (MQ=255) ggTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAatcat > 1:3641550/1‑150 (MQ=255) gTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAatcatc > 2:536829/1‑150 (MQ=255) cAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCt > 2:4303500/1‑150 (MQ=255) tGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTtc > 1:90537/1‑150 (MQ=255) gCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGGGCGCCATCCAGCGCAATCATCCTTTtca < 2:2581838/150‑1 (MQ=255) cTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTtcat > 2:1106951/1‑150 (MQ=255) cTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATCGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTtcat < 2:2120968/150‑1 (MQ=255) tGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTtcatc > 1:4443104/1‑150 (MQ=255) cgcAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCAtt < 2:4793798/150‑1 (MQ=255) cAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCCGCGCACTCATCCTGTTCATCATTTATcc > 2:4744118/1‑150 (MQ=255) ccGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTa < 2:1669958/150‑1 (MQ=255) cGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTAc < 1:3272112/150‑1 (MQ=255) tttCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGca > 1:2820193/1‑150 (MQ=255) tCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCCATCATCCTTTTCATCATTTATCCTTTTACGcaca > 2:4373131/1‑150 (MQ=255) cgcccgccCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCacac < 2:4858119/150‑1 (MQ=255) cgcccgccCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCacac < 1:4581884/150‑1 (MQ=255) cccgcccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCAcacca < 2:2208913/150‑1 (MQ=255) cccgcccgGCACGAAGGCTGGTGATGGTAAATGGCGGGCCGGGTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCCGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCAcacca < 2:3891515/150‑1 (MQ=255) ccgcccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTACGCCCTGTGCGCCAGCCAGCGCAATCCTCCTTTTCAGCATTTATCCTTTTACGCAcaccac > 2:180517/1‑150 (MQ=255) cgcccgGCACGTATGCTGGTGTTTCTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCTAACTATCTGCCCGCCACCTTCGCCCTGTGCGCCATCAAGCGCAATCAACCTTTTCATCATTTATCCTTTTACGCACaccacc > 2:580133/1‑150 (MQ=255) gcccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCt > 2:3104079/1‑150 (MQ=255) gcccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCt > 1:30522/1‑150 (MQ=255) cccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTg < 1:1701833/150‑1 (MQ=255) cccgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTg > 2:1188074/1‑150 (MQ=255) cgGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCCCTCATCCTTTTCATCATTTATCCTTTTACGCACACCACCGGAc > 2:5029275/1‑150 (MQ=255) cACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCa > 2:1474988/1‑150 (MQ=255) cACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCa < 2:83888/150‑1 (MQ=255) cACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCa < 1:1465123/150‑1 (MQ=255) cACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCa < 1:1051021/150‑1 (MQ=255) cACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCa > 2:1762837/1‑150 (MQ=255) cGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAgg > 1:5027242/1‑150 (MQ=255) gAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAggg > 2:1362086/1‑150 (MQ=255) gAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAggg > 2:3447710/1‑150 (MQ=255) aaTGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGt > 2:20138/1‑150 (MQ=255) aTGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGtc > 1:4553215/1‑149 (MQ=255) gCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGtata > 1:4015220/1‑150 (MQ=255) ggTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGAt > 1:1209749/1‑150 (MQ=255) gTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATa > 1:4066318/1‑150 (MQ=255) gTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATa > 1:2222170/1‑150 (MQ=255) gTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTcc > 1:4981039/1‑150 (MQ=255) tAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTcca < 2:922417/150‑1 (MQ=255) tAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTcca < 1:1150787/150‑1 (MQ=255) tAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTcca > 2:4233431/1‑150 (MQ=255) aaTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacc > 1:4847002/1‑150 (MQ=255) aaTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacc > 2:2825608/1‑150 (MQ=255) aaTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacc > 1:4182741/1‑150 (MQ=255) aTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacca < 2:4484296/150‑1 (MQ=255) aTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacca < 1:5148390/150‑1 (MQ=255) aTGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTccacca < 2:1930230/150‑1 (MQ=255) tggctggcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAg > 1:588780/1‑150 (MQ=255) tggctggcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGACATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAg < 1:1765993/150‑1 (MQ=255) tggcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCg > 2:366284/1‑150 (MQ=255) tggcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCg > 2:4661047/1‑150 (MQ=255) tggcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCg < 2:2318800/150‑1 (MQ=255) gcCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCt < 2:2912720/150‑1 (MQ=255) ggTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTtg > 1:4704575/1‑150 (MQ=255) tATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgc < 1:3600621/150‑1 (MQ=255) atcatcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgcc < 2:1448221/150‑1 (MQ=255) atcatcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCGTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgcc > 2:1595999/1‑150 (MQ=255) tcatcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgccg < 1:998311/150‑1 (MQ=255) tcatcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgccg > 1:628327/1‑150 (MQ=255) catcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgccgc < 1:1646667/150‑1 (MQ=255) atcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgccgcc > 1:1319912/1‑150 (MQ=255) atcGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTgccgcc > 2:4607373/1‑150 (MQ=255) aCAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCa > 1:119519/1‑150 (MQ=255) aGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCAcc < 1:4887052/150‑1 (MQ=255) tCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCAt < 1:3069194/150‑1 (MQ=255) aGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCa > 2:3703971/1‑150 (MQ=255) aGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCa < 1:2730235/150‑1 (MQ=255) cgcCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAat > 1:2541618/1‑150 (MQ=255) gcCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAata < 2:4400244/150‑1 (MQ=255) ccGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAatat > 2:2406355/1‑150 (MQ=255) cGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATc > 1:2717256/1‑150 (MQ=255) gAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCt < 1:3167166/150‑1 (MQ=255) aGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCtt < 1:3245392/150‑1 (MQ=255) gcAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTtat < 1:536829/150‑1 (MQ=255) gcAGGATCTGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTtat > 1:1885824/1‑150 (MQ=255) aGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATAc > 2:2976226/1‑150 (MQ=255) cTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCAt > 2:4918648/1‑150 (MQ=255) cTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCAt < 1:3812607/150‑1 (MQ=255) tGCCCGCCACCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATc < 1:3130803/150‑1 (MQ=255) cGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGa < 2:2668585/150‑1 (MQ=255) cGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGa > 1:2293937/1‑150 (MQ=255) gCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCgggct > 2:3968021/1‑148 (MQ=255) aCCTTCGCCCAGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTtc < 2:232535/150‑1 (MQ=255) cTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTtcgt < 1:742845/150‑1 (MQ=255) ttCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTtcgtc < 1:209965/150‑1 (MQ=255) tCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTtcgtcg > 2:5081891/1‑150 (MQ=255) cGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCAACGGGATTTCGTCGa > 2:3311395/1‑150 (MQ=255) ccTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTTCGTCGATCa < 2:418570/150‑1 (MQ=255) ccTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTTCGTCGATCa > 1:769411/1‑150 (MQ=255) | TTTCCGTCGCCGCCTTTACCGCGGTCAGATGCTGGCGCAACAGCCCCGGTTTCGCCCGCCCGGCACGAATGCTGGTGATGGTAAATGGCTGGCCGGTTATCATCGACAGGCTCAGCGCCGAGCGCAGGATCTGCCCGCCACCTTCGCCCTGTGCGCCATCCAGCGCAATCATCCTTTTCATCATTTATCCTTTTACGCACACCACCTGACGCAGGGTATAGATAACTTCCACCAGATCGCTTTGTGCCGCCATCACCGCATCAATATCTTTATACGCCATCGGGATTTCGTCGATCACT > CP009273/3550028‑3550326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |