| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,711,401 | T→A | 11.2% | N244K (AAT→AAA) | ghrB → | glyoxylate/hydroxypyruvate reductase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,711,401 | 0 | T | A | 11.2% | 1189.4 / 111.3 | 367 | N244K (AAT→AAA) | ghrB | glyoxylate/hydroxypyruvate reductase B |
| Reads supporting (aligned to +/- strand): ref base T (174/152); new base A (22/19); total (196/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 369 total aligned reads displayed.
ATACTCTGTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCG > CP009273/3711253‑3711550 | aCTCTGTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCa < 1:2951564/150‑1 (MQ=255) ctGTTACAAGAGTCAGATTTCGATTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTg < 2:336840/150‑1 (MQ=255) gTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGAt > 1:2289282/1‑150 (MQ=255) gTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGAt > 2:4300720/1‑150 (MQ=255) gTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGAt > 2:4039839/1‑150 (MQ=255) ttACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATc > 1:370720/1‑150 (MQ=255) ttACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATc < 2:3869760/150‑1 (MQ=255) agagTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCgcagc < 1:1455906/150‑1 (MQ=255) tCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTg < 2:2024891/150‑1 (MQ=255) tCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTg < 2:1907081/150‑1 (MQ=255) tCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTg > 1:968398/1‑150 (MQ=255) aGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCa > 2:223140/1‑150 (MQ=255) tCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAg < 1:1628155/150‑1 (MQ=255) tCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAg < 1:4137847/150‑1 (MQ=255) tttGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCg > 2:4733536/1‑150 (MQ=255) tGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGaa > 2:65129/1‑150 (MQ=255) cTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAAtt < 1:330863/150‑1 (MQ=255) tGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTc > 1:3996267/1‑150 (MQ=255) tGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTc > 1:2414993/1‑150 (MQ=255) aTCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCAc > 2:2184544/1‑150 (MQ=255) tCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACg < 1:4508697/150‑1 (MQ=255) cTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCt < 2:2600381/150‑1 (MQ=255) cTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCt < 1:2153450/150‑1 (MQ=255) cTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCt < 2:670962/150‑1 (MQ=255) gCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGc > 2:3527922/1‑150 (MQ=255) ccGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGcc > 2:2141547/1‑150 (MQ=255) cGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCg < 1:4077553/150‑1 (MQ=255) gTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCgg > 2:4926143/1‑150 (MQ=255) gTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCgg > 2:15034/1‑150 (MQ=255) tAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGc < 1:4901613/150‑1 (MQ=255) tAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGc > 1:4672816/1‑150 (MQ=255) aaCTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCt < 1:1401024/150‑1 (MQ=255) tgatgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGa > 1:1772759/1‑150 (MQ=255) tgatgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGa < 2:4263821/150‑1 (MQ=255) gatgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGAt < 1:2481923/150‑1 (MQ=255) tgaGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGt > 2:602203/1‑150 (MQ=255) gaCGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCtt > 2:4065397/1‑150 (MQ=255) aCGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTc < 2:1410204/150‑1 (MQ=255) aCGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTc < 1:699582/150‑1 (MQ=255) catcatCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGaa > 1:3198869/1‑150 (MQ=255) atcatcTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAAc < 1:1177823/150‑1 (MQ=255) atcatcTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAAc > 2:4648849/1‑150 (MQ=255) atcatcTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAAc > 1:4614292/1‑150 (MQ=255) cTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAagag > 2:3575646/1‑150 (MQ=255) cTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAagag > 1:4978518/1‑150 (MQ=255) tGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAAAGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGc > 1:422995/1‑150 (MQ=255) gTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGcc > 1:5114938/1‑150 (MQ=255) gTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGcc > 2:1770437/1‑150 (MQ=255) ttGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCAc < 2:2081471/150‑1 (MQ=255) gcAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTcc > 2:1723859/1‑150 (MQ=255) cAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCg > 1:307099/1‑150 (MQ=255) aGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGt < 2:84596/150‑1 (MQ=255) gAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTa < 2:3771165/150‑1 (MQ=255) aCAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGa > 2:4437353/1‑150 (MQ=255) tCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGc < 1:4808739/150‑1 (MQ=255) cGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGcc < 1:1952775/150‑1 (MQ=255) cGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGcc < 2:1101647/150‑1 (MQ=255) cGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGcc > 2:3265003/1‑150 (MQ=255) gCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCg < 2:5061146/150‑1 (MQ=255) gCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCg < 2:2978453/150‑1 (MQ=255) aaaaTGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTg < 2:4450569/150‑1 (MQ=255) aaTGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGct > 1:3845014/1‑150 (MQ=255) aTGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGctc > 2:3446815/1‑150 (MQ=255) aTGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGctc > 2:1597411/1‑150 (MQ=255) aTGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGctc < 2:1357935/150‑1 (MQ=255) aaTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCaa > 2:1006226/1‑150 (MQ=255) aTCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAAt < 1:223140/150‑1 (MQ=255) cctccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATgg < 1:65557/150‑1 (MQ=255) tccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGcc < 1:5041950/150‑1 (MQ=255) ccGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCa < 1:2930618/150‑1 (MQ=255) cGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCaa < 2:2752426/150‑1 (MQ=255) ccATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcg > 2:1880767/1‑150 (MQ=255) ccATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAAcg > 1:1274612/1‑150 (MQ=255) ttCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACgtcgtc > 1:1240493/1‑150 (MQ=255) ttCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACgtcgtc < 2:146802/150‑1 (MQ=255) tCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGtcgtcg < 2:4794373/150‑1 (MQ=255) cATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGc > 1:5107456/1‑150 (MQ=255) ttAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAg < 2:4137484/150‑1 (MQ=255) tAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGt > 1:1556126/1‑150 (MQ=255) aaTGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGtc > 2:5135084/1‑149 (MQ=255) ctGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTAc < 1:515998/149‑1 (MQ=255) gCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCg < 2:3693145/150‑1 (MQ=255) ccGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGc > 2:4825346/1‑150 (MQ=255) cGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCa < 1:578189/150‑1 (MQ=255) cGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCa > 1:2585102/1‑150 (MQ=255) ggACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCat > 1:3432987/1‑150 (MQ=255) aCGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCatat < 1:4447462/150‑1 (MQ=255) ggCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATCTTGGa > 2:2636326/1‑150 (MQ=255) ccGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCt < 2:4668971/150‑1 (MQ=255) cGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTg > 2:1195304/1‑150 (MQ=255) cGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTg < 2:2422719/150‑1 (MQ=255) cGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTg > 2:2304545/1‑150 (MQ=255) ggtggtTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGc > 2:3089284/1‑150 (MQ=255) gtTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCAcc > 1:4025233/1‑150 (MQ=255) gtTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCAcc < 1:2691081/150‑1 (MQ=255) tGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCa > 1:4701941/1‑150 (MQ=255) gAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATgag < 1:4383717/150‑1 (MQ=255) aaaaTGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATgaga > 1:3555952/1‑150 (MQ=255) aaaaTGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATgaga > 1:2805626/1‑150 (MQ=255) tGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGAcgcg < 2:920068/150‑1 (MQ=255) | ATACTCTGTTACAAGAGTCAGATTTCGTTTGCCTGATCCTGCCGTTAACTGATGAGACGCATCATCTGTTTGGCGCAGAACAATTCGCCAAAATGAAATCCTCCGCCATTTTCATTAATGCCGGACGTGGCCCGGTGGTTGACGAAAATGCACTGATCGCAGCATTGCAGAAAGGCGAAATTCACGCTGCCGGGCTGGATGTCTTCGAACAAGAGCCACTGTCCGTAGATTCGCCGTTGCTCTCAATGGCCAACGTCGTCGCAGTACCGCATATTGGATCTGCCACCCATGAGACGCG > CP009273/3711253‑3711550 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |