| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,330,426 | Δ1 bp | 100% | intergenic (‑88/+111) | adiA ← / ← melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,330,426 | 0 | T | . | 88.9% | 976.0 / 122.6 | 234 | intergenic (‑88/+111) | adiA/melR | arginine decarboxylase/melibiose operon transcriptional regulator; autoregulator |
| Reads supporting (aligned to +/- strand): ref base T (12/14); new base . (108/100); total (120/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 249 total aligned reads displayed.
ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAG > CP009273/4330277‑4330572 | aCGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAt < 1:1390321/150‑1 (MQ=255)aCGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAt < 2:1371732/150‑1 (MQ=255) ggCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt < 2:798198/150‑1 (MQ=255) ggCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttt < 2:2965276/150‑1 (MQ=255) gCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAtttt < 2:3483260/150‑1 (MQ=255) cGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttg < 2:3875750/150‑2 (MQ=255) ttACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACAttttgaa < 1:2366221/150‑4 (MQ=255) gACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAatat < 2:3055756/150‑1 (MQ=255) cccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATAttt < 2:3400322/150‑1 (MQ=255) ccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg > 2:3308117/1‑150 (MQ=255) ccAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAg > 2:4171935/1‑150 (MQ=255) aGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtt > 1:3092648/1‑150 (MQ=255) gtgtCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGtttt > 1:2137964/1‑150 (MQ=255) cTTGATGGAGAAACTCGCTTTCAACAATTAAAACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑ATTTGAAATATTTAGTTTTATaa > 1:272460/1‑150 (MQ=255) tgagaAACTCGCTTTCAACAATTAATTCTTTCTTCATTGCTTACCCGGTTTTGAAGGATTCTTCGTTGCGGGCAAGTATCTTCCGGACCTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑GTTTGAAATATTTAGTTTTATAAACAATa < 1:3444798/149‑1 (MQ=255) ggAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAAt > 1:1706528/1‑150 (MQ=255) ggAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATa < 1:4489895/150‑1 (MQ=255) gagaAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAc < 2:1136005/150‑1 (MQ=255) aaaCTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGtt < 2:1792919/150‑1 (MQ=255) aaaCTCGCTTTCAACAAGTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGAATCTTCAGGCCTTGTCGGGCTGTAAAGCGCGTGAAAAACACACA‑TTGTGACATATTTAGTTTTATAAACAAGACGtg > 2:2582183/1‑149 (MQ=255) tCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTAtgt > 1:529807/1‑150 (MQ=255) cTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGat > 2:1648006/1‑150 (MQ=255) cTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGat < 1:474164/150‑1 (MQ=255) tttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatt < 2:2074124/150‑1 (MQ=255) tttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatt > 2:3262661/1‑150 (MQ=255) ttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGTAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatta < 1:4526278/150‑1 (MQ=255) ttCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatt > 1:895915/1‑150 (MQ=255) aacaaTCAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAttt > 2:2795930/1‑150 (MQ=255) acaaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTAtttt < 1:2651467/150‑1 (MQ=255) aaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaa < 2:1156212/150‑1 (MQ=255) aaTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaa < 1:3937154/150‑1 (MQ=255) aTTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTaaa > 2:3457506/1‑150 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAat < 1:3598176/150‑1 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAat < 1:1329602/150‑1 (MQ=255) ttAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAat < 1:851758/150‑1 (MQ=255) aaTACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAatta > 1:4010322/1‑150 (MQ=255) cTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTAttt > 1:3201635/1‑150 (MQ=255) tttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATAAGTTATGTGATTATTTTAAATTATTTTc > 2:2654569/1‑150 (MQ=255) tcatcaTTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCAc > 1:3952025/1‑150 (MQ=255) tcatcaTTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCAc > 2:3685007/1‑150 (MQ=255) atcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTg < 1:2449963/150‑1 (MQ=255) atcatTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCGTCCGGCCGTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAATTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTg < 2:229713/150‑1 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 2:1622745/1‑150 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 1:3831898/1‑150 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 1:3831857/1‑150 (MQ=255) atTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtt > 1:3831487/1‑150 (MQ=255) ttGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAATACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCtta < 1:660861/150‑1 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttat > 1:4090163/1‑150 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttat > 1:2608471/1‑150 (MQ=255) gCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatt > 1:6037/1‑150 (MQ=255) cTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCttatta > 1:346967/1‑150 (MQ=255) aCCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCg < 2:3613517/150‑1 (MQ=255) ccGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGAc < 1:2641972/150‑1 (MQ=255) tATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTa < 1:1035748/150‑1 (MQ=255) tGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTaaa < 2:3180597/150‑1 (MQ=255) ggAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAt < 1:2163321/150‑1 (MQ=255) ggAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAt < 1:2163754/150‑1 (MQ=255) aaTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAttt < 2:1057531/150‑1 (MQ=255) cTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtttttt < 1:3225246/150‑1 (MQ=255) cTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTAtttttt < 1:2761582/150‑1 (MQ=255) cGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTgg > 1:1745967/1‑150 (MQ=255) gTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGc > 1:1572401/1‑150 (MQ=255) ttGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGct < 2:2614786/150‑1 (MQ=255) tGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctg > 2:1447912/1‑150 (MQ=255) gggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgat < 2:3659102/150‑1 (MQ=255) gggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgata < 2:3967414/150‑1 (MQ=255) gggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgata > 2:2208795/1‑150 (MQ=255) gggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATAGACGGCTAAACTATTTTTTTTGctgata > 2:2208882/1‑150 (MQ=255) ggCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGctgatac < 1:1963614/150‑1 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 2:2523005/150‑1 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat > 2:4131223/1‑150 (MQ=255) tATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGatat < 2:3747183/150‑1 (MQ=255) aTCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATc > 1:2912121/1‑150 (MQ=255) ttCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTc < 1:382937/150‑1 (MQ=255) ttCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTc < 1:725538/150‑1 (MQ=255) tCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCt < 1:3741040/150‑1 (MQ=255) ccGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCtt < 1:2275473/150‑1 (MQ=255) gCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTa < 2:1534511/150‑1 (MQ=255) ccTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGc > 2:1970150/1‑150 (MQ=255) tttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCgg < 1:1504113/150‑1 (MQ=255) ttCGGGCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCggg < 2:1462698/150‑1 (MQ=255) gggCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGATTATTATCGACGGCTAAACTATTTTTTTTGCTGATACTGATATCGTCTTTAGCCGGGaa > 2:4446604/1‑150 (MQ=255) gCTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACg < 2:54396/150‑1 (MQ=255) cTGTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGt < 2:84233/150‑1 (MQ=255) gTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCt < 2:2682358/150‑1 (MQ=255) gTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCt > 2:1247551/1‑150 (MQ=255) gTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCt > 2:704794/1‑150 (MQ=255) gTAAAGCGCGTGAAAAACAAACA‑TTTTGAAATAGTTAGTTGTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCTCTGCTTATTATCGACGGCTAAACTATTTTTTTGGATGATACTGATATCGTCTTTATCCGGGAAACGTCt > 2:2041201/1‑150 (MQ=255) cgcgTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcgg < 2:1706528/150‑1 (MQ=255) cgcgTGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTggcggc > 1:4412161/1‑150 (MQ=255) tGAAAAACAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTg < 1:3095455/150‑1 (MQ=255) gAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTg > 2:1835287/1‑150 (MQ=255) aaaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGtt < 2:1032816/150‑1 (MQ=255) aaaaCAAATA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg < 1:515007/150‑1 (MQ=255) aaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 2:497176/1‑150 (MQ=255) aaaaCAAACA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 1:1464799/1‑150 (MQ=255) aaacaaacATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTg > 1:1111689/1‑150 (MQ=255) aaacaaacA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTgg > 1:283246/1‑150 (MQ=255) aaaaaaacA‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATAATCGACGGCTAAACTATTTTTTTGGCTTATAATGATATCGTCTTTATCCGGGAAACGTCTGGCGTCGCTGTTgg > 2:2883869/1‑150 (MQ=255) aacaaaca‑TTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGc > 1:4239843/1‑150 (MQ=255) | ACGGCGTTACCGACCCAGGTGTCTTGATGGAGAAACTCGCTTTCAACAATTAATACTTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGACGGCTAAACTATTTTTTTGGCTGATACTGATATCGTCTTTAGCCGGGAAACGTCTGGCGGCGCTGTTGGCTAAG > CP009273/4330277‑4330572 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |