| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,544,369 | T→A | 10.3% | E488D (GAA→GAT) | malP ← | maltodextrin phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,544,369 | 0 | T | A | 10.3% | 1129.5 / 94.6 | 359 | E488D (GAA→GAT) | malP | maltodextrin phosphorylase |
| Reads supporting (aligned to +/- strand): ref base T (161/161); new base A (15/22); total (176/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.01e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 | |||||||||||
Only 100 of 372 total aligned reads displayed.
CATGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCTG > CP009273/3544221‑3544518 | cATGCAAACGTTTGATCTGAATCTCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAAttttt < 2:4493463/150‑1 (MQ=255) aTGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTc < 1:2984390/150‑1 (MQ=255) aTGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTc > 1:2319826/1‑150 (MQ=255) gCAAACGTTTGATCTGAATATCGAAAATTGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCa < 1:2714382/150‑1 (MQ=255) gCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCa > 2:4359378/1‑150 (MQ=255) cAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAg > 2:4295145/1‑150 (MQ=255) cAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAg > 2:2023751/1‑150 (MQ=255) aaCGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGAt > 1:63813/1‑150 (MQ=255) cGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTg > 1:2219649/1‑150 (MQ=255) cGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTg > 2:3175967/1‑150 (MQ=255) tttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGAt < 1:3472829/150‑1 (MQ=255) tttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGAt < 1:4371235/150‑1 (MQ=255) tttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGAt > 1:3099030/1‑150 (MQ=255) ttGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATc < 2:2034650/150‑1 (MQ=255) tGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCa < 1:3455804/150‑1 (MQ=255) gATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCTAATTTTTCCAGATTGATCAg > 1:2739802/1‑150 (MQ=255) gATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAg > 1:1015241/1‑150 (MQ=255) cTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTg < 1:3507277/150‑1 (MQ=255) tGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGa > 1:1195492/1‑150 (MQ=255) aaTATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATc < 2:3036208/150‑1 (MQ=255) atatCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCg > 1:2156398/1‑150 (MQ=255) atatCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCg < 2:2819305/150‑1 (MQ=255) tatCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCga > 1:2391104/1‑150 (MQ=255) tatCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCga > 1:695582/1‑150 (MQ=255) atCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCgag > 2:2625613/1‑150 (MQ=255) atCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCgag > 2:1677599/1‑150 (MQ=255) atCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCgag < 2:3104965/150‑1 (MQ=255) atCGAAAATCGCCTGTGGAATGATCACAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCAGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCgag > 2:4144451/1‑150 (MQ=255) cGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGAt > 2:3765173/1‑150 (MQ=255) gAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATc < 2:3178388/150‑1 (MQ=255) aaaaTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCg < 2:4021779/150‑1 (MQ=255) aaaaTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCg < 2:161865/150‑1 (MQ=255) aaaaTCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCg < 2:160770/150‑1 (MQ=255) tCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAg < 2:2428392/150‑1 (MQ=255) tCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAg < 2:1877981/150‑1 (MQ=255) gCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGcc > 2:1089387/1‑150 (MQ=255) ccTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGccc < 2:133044/150‑1 (MQ=255) ccTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGccc < 2:916902/150‑1 (MQ=255) gtgGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCAct < 1:2874315/150‑1 (MQ=255) tgGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCActc > 1:1138245/1‑150 (MQ=255) gATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTg < 1:1767175/150‑1 (MQ=255) ctcAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAg > 1:518975/1‑150 (MQ=255) ctcAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAg > 1:2806584/1‑150 (MQ=255) ctcAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTGTGCAg > 2:2952990/1‑150 (MQ=255) cAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTg > 2:3521485/1‑150 (MQ=255) aaTACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGa < 2:3899740/150‑1 (MQ=255) tACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGAtt < 1:4536449/150‑1 (MQ=255) aCCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGAGATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGAttt < 1:1432081/150‑1 (MQ=255) ccGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTa < 1:371254/150‑1 (MQ=255) cGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTAt < 1:3747074/150‑1 (MQ=255) tACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCa > 1:1988406/1‑150 (MQ=255) taCTTTCACAAACTCCGCCAGTCGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACag < 2:4409553/149‑1 (MQ=255) ttCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgcc < 1:2790056/150‑1 (MQ=255) tCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGTGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgccg < 1:2464060/150‑1 (MQ=255) tCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgccg > 2:587030/1‑150 (MQ=255) cacaAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAgccgc > 1:1597708/1‑150 (MQ=255) caAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCa < 2:966225/150‑1 (MQ=255) aaaCTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAg > 2:1783450/1‑150 (MQ=255) cTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGc > 2:1098872/1‑150 (MQ=255) gCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCggg > 2:2606753/1‑150 (MQ=255) cAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGtt < 2:1448382/150‑1 (MQ=255) aGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTg > 1:23575/1‑150 (MQ=255) gACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGc < 1:1263218/150‑1 (MQ=255) tATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGa > 1:4057926/1‑150 (MQ=255) tATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGa > 1:2535615/1‑150 (MQ=255) aTTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGAt < 1:4218400/150‑1 (MQ=255) tCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATcc < 2:2239794/150‑1 (MQ=255) cGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCa < 1:1516481/150‑1 (MQ=255) gCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAg < 2:4176581/150‑1 (MQ=255) gCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAg < 2:4176198/150‑1 (MQ=255) tGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGa < 1:797926/150‑1 (MQ=255) gCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGAc > 1:787240/1‑150 (MQ=255) gCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTAAGCCCACTCTTTTTGCAGAGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGAACTGTTTGATCCAGCGAc > 2:851964/1‑150 (MQ=255) tGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTg > 2:1355647/1‑150 (MQ=255) aTCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTggg < 1:4359378/150‑1 (MQ=255) ctcGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGt < 2:2252886/150‑1 (MQ=255) gATATTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATAc < 1:2639706/150‑1 (MQ=255) atTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGt > 2:3703977/1‑150 (MQ=255) atTGCTGACGGAATTTCGCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGt > 2:4094063/1‑150 (MQ=255) cTGACGGAATTTCGCATCATCAGCTAATTTTTCCAGATTGATCAGCTGATCGAGATCGTGAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGt < 2:2738966/150‑1 (MQ=255) cGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACg > 1:89515/1‑150 (MQ=255) cGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACg < 1:1597848/150‑1 (MQ=255) gAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGtt > 1:4495381/1‑150 (MQ=255) tttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATg < 1:3907077/150‑1 (MQ=255) ttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATgg < 2:3928491/150‑1 (MQ=255) ttCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATgg < 1:4042486/150‑1 (MQ=255) tCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGa < 2:4048649/150‑1 (MQ=255) tCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGa < 2:1072272/150‑1 (MQ=255) gCATCATCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAt > 2:3121713/1‑150 (MQ=255) catcatCAGCGAATTTATCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAtt > 2:2222718/1‑150 (MQ=255) atcatcAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAAttt > 1:2576079/1‑150 (MQ=255) catcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGt < 2:764501/150‑1 (MQ=255) atcaGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGtt > 1:853366/1‑150 (MQ=255) caGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCg < 1:129871/150‑1 (MQ=255) caGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCg < 1:2431662/150‑1 (MQ=255) gAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCa > 2:128958/1‑150 (MQ=255) gAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCa > 1:412968/1‑150 (MQ=255) tttttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAg < 1:3321165/150‑1 (MQ=255) tttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCt < 2:2319826/150‑1 (MQ=255) tttCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCt < 2:2319923/150‑1 (MQ=255) | CATGCAAACGTTTGATCTGAATATCGAAAATCGCCTGTGGATTGATCTCAATACCGGTACGAACTTTCACAAACTCCGCCAGACGGACTTTATTCGCCTGCTTGATCTCGCGATATTGCTGACGGAATTTCGCATCATCAGCGAATTTTTCCAGATTGATCAGCTGATCGAGATCGTTAGCCCACTCTTTTTGCAGTGATTTATCCAACAGAGCCGCCAGTGCCGGGTTGCACTGTTTGATCCAGCGACGTGGGGTAATACCGTTGGTGACGTTATGGAATTTGTTCGGCCATAGCTG > CP009273/3544221‑3544518 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |