| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,688,591 | A→C | 5.7% | S2R (AGT→AGG) | bcsA ← | cellulose synthase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,688,591 | 0 | A | C | 5.7% | 789.0 / 33.6 | 257 | S2R (AGT→AGG) | bcsA | cellulose synthase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base A (116/126); new base C (6/9); total (122/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.04e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
TGCTCCAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAGCCATCGCTTCA > CP009273/3688442‑3688740 | tGCTCCAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATa < 1:380146/150‑1 (MQ=255) cTCCAGCGGAATAAAAGTCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACt > 1:2466447/1‑150 (MQ=255) cTCCAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACt > 1:1950662/1‑150 (MQ=255) cTCCAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACt > 1:1951418/1‑150 (MQ=255) ccAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCa > 1:4013520/1‑150 (MQ=255) ccAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCa > 1:134033/1‑150 (MQ=255) ccAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCa > 1:767601/1‑150 (MQ=255) cAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCat < 2:1079576/150‑1 (MQ=255) gCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatga < 2:1741196/150‑1 (MQ=255) cGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatgat < 1:3463509/150‑1 (MQ=255) cGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatgat > 2:2074202/1‑150 (MQ=255) cGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatgat < 1:451374/150‑1 (MQ=255) cGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatgat > 1:3725898/1‑150 (MQ=255) ggAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCatgatg < 2:892669/150‑1 (MQ=255) aTAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCAc < 2:1980616/150‑1 (MQ=255) tAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACt < 1:4079031/150‑1 (MQ=255) tAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACt < 1:3085580/150‑1 (MQ=255) tAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACt > 2:4219258/1‑150 (MQ=255) tAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACt < 1:1263909/150‑1 (MQ=255) aaaaTCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTcc < 2:3229710/150‑1 (MQ=255) aTCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGa > 2:3497307/1‑150 (MQ=255) gccaggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCg < 1:2912703/150‑1 (MQ=255) gccaggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCg > 1:2795759/1‑150 (MQ=255) gccaggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCg < 1:146582/150‑1 (MQ=255) ccaggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGt > 1:3669449/1‑150 (MQ=255) aggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGttt < 1:2049133/150‑1 (MQ=255) ggATCATCCAGAAACAGTCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGtttt > 2:4141920/1‑150 (MQ=255) ggATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGtttt > 2:4141879/1‑150 (MQ=255) atcatcCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCa < 1:2264188/150‑1 (MQ=255) tcatcCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAg > 1:752749/1‑150 (MQ=255) tcCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGccc < 1:3366647/150‑1 (MQ=255) aGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGa > 1:1541003/1‑150 (MQ=255) aCAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGagtag < 2:3790364/150‑1 (MQ=255) gCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATCCTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTc < 1:2385575/150‑1 (MQ=255) gCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTc > 2:923003/1‑150 (MQ=255) gCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAAAGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTc < 2:4091295/150‑1 (MQ=255) gCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAAAGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTc < 2:365365/150‑1 (MQ=255) gAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAAc < 2:3719378/150‑1 (MQ=255) aGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACa < 1:1413672/150‑1 (MQ=255) aGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACa < 1:1414616/150‑1 (MQ=255) gTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGc < 1:3797153/150‑1 (MQ=255) cgcgCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCAc > 1:262769/1‑150 (MQ=255) cgcgCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCAc < 2:3268890/150‑1 (MQ=255) gcgcTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCAcc < 1:3001784/150‑1 (MQ=255) gcgcTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCAcc > 1:3984300/1‑150 (MQ=255) cTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGt > 2:3316867/1‑150 (MQ=255) ccGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAg > 2:4413041/1‑150 (MQ=255) gACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCg > 2:4104259/1‑150 (MQ=255) aCGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGt > 2:1170890/1‑150 (MQ=255) cGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGGTAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTc < 1:2186328/150‑1 (MQ=255) cGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTc < 1:2186340/150‑1 (MQ=255) cGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTc < 1:1627304/150‑1 (MQ=255) cGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTc < 2:298453/150‑1 (MQ=255) cGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTc < 2:1446306/150‑1 (MQ=255) gCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCa > 1:4285848/1‑150 (MQ=255) gCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCa > 1:2040202/1‑150 (MQ=255) cGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAt < 1:1075619/150‑1 (MQ=255) cGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAt > 2:1581905/1‑150 (MQ=255) gTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAtc < 2:2964195/150‑1 (MQ=255) gTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAtc < 1:3572729/150‑1 (MQ=255) gTGACGACGAGAATCGCGATCACGCCCGAGACGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAtc < 2:2964304/150‑1 (MQ=255) tGACGACGATAATCGCGATAACGCCCGATACGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTAtct < 2:278574/150‑1 (MQ=255) cgacgaTAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCtt < 2:229175/150‑1 (MQ=255) acgaTAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCa < 2:549910/150‑1 (MQ=255) aTAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAgcc > 1:714468/1‑150 (MQ=255) aTAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAgcc > 1:2982935/1‑150 (MQ=255) aTCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAgccgcc < 2:3990754/150‑1 (MQ=255) aTCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAgccgcc < 2:3968503/150‑1 (MQ=255) aTCGCGAGAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAgccgcc < 2:2148578/150‑1 (MQ=255) tCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCa < 1:3168251/150‑1 (MQ=255) cgcgATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAg > 1:2098111/1‑150 (MQ=255) cgATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAgcg < 2:2720433/150‑1 (MQ=255) cgATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAgcg < 2:2720898/150‑1 (MQ=255) gATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAgcgc > 2:2609794/1‑150 (MQ=255) gATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAgcgc > 2:314648/1‑150 (MQ=255) cGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCAc > 1:3112610/1‑150 (MQ=255) gCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATCCTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACt < 1:3294900/150‑1 (MQ=255) gCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACt > 2:3334992/1‑150 (MQ=255) cccGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCGTCAGCCGCCAGCGCATCACTg < 1:979506/150‑1 (MQ=255) aTAAGCCGCGCGTTGACCGTCGGGATAAGCAACCACCGGGTCAGGATCCTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGAATCACTGCGat < 1:2590800/150‑1 (MQ=255) cgTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTAc > 2:1839905/1‑150 (MQ=255) ttGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTg < 1:1078659/150‑1 (MQ=255) ttGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTg < 2:4426447/150‑1 (MQ=255) gACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGt < 1:4238486/150‑1 (MQ=255) gACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGt < 1:1760147/150‑1 (MQ=255) ccGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTg < 1:2596667/150‑1 (MQ=255) cggcggGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGc < 1:4413041/150‑1 (MQ=255) ggcggGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCt < 1:1181069/150‑1 (MQ=255) cggGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTa > 2:601140/1‑150 (MQ=255) cggGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTa > 2:863943/1‑150 (MQ=255) gggATAAGCAACCACCGGGTCAGGATCCTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAg > 2:2406156/1‑150 (MQ=255) gggATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAg > 2:2985983/1‑150 (MQ=255) gggATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAg < 2:752749/150‑1 (MQ=255) aGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCa > 1:4025844/1‑150 (MQ=255) ccaccGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCAt > 2:4064946/1‑150 (MQ=255) ccGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCa < 1:1351861/150‑1 (MQ=255) cGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAg > 1:2738417/1‑150 (MQ=255) gTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAGCCa > 2:3023000/1‑150 (MQ=255) cAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAGCCATc > 2:1323276/1‑150 (MQ=255) ggATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAGCCATCGc > 1:1126107/1‑150 (MQ=255) | TGCTCCAGCGGAATAAAAATCCAGGCCAGGATCATCCAGAAACAGCCGAGCGTCGCGCTGAAAGCCGACGCACCGTGACGACGATAATCGCGATAACGCCCGATAAGCCGCGCGTTGACCGGCGGGATAAGCAACCACCGGGTCAGGATACTCATGATGCACTCCCGACTGGCGTTTTCAGCCCGGAGTAGTTCAACAGGCACCAGTTCGCCAGCGTCAGTATCTCTTCAGCCGCCAGCGCATCACTGCGATATTCACCTACTGGTTGCTTAGCCGCCAGGCATTCAGCCATCGCTTCA > CP009273/3688442‑3688740 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |