| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,777,924 | C→A | 53.8% | intergenic (‑122/+20) | grxC ← / ← yibN | glutaredoxin 3/putative rhodanese‑related sulfurtransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,777,924 | 0 | C | A | 53.8% | 22.8 / inf | 234 | intergenic (‑122/+20) | grxC/yibN | glutaredoxin 3/putative rhodanese‑related sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base C (60/48); new base A (58/68); total (118/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.22e-01 | |||||||||||
Only 100 of 242 total aligned reads displayed.
CTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGAACC > CP009273/3777775‑3778072 | cTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGcatc < 2:1727379/150‑1 (MQ=255)cTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGcatc < 2:3982472/150‑1 (MQ=255) ttGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGcatcat > 2:2730896/1‑150 (MQ=255) ggTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGa < 1:1300096/150‑1 (MQ=255) aGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAgac < 2:1529233/150‑1 (MQ=255) aGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAgac > 2:3166035/1‑150 (MQ=255) gATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAgacg < 2:3477843/150‑1 (MQ=255) aTTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAgacga > 2:3592139/1‑150 (MQ=255) tttCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAgacgac < 1:3447765/150‑1 (MQ=255) tttCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAgacgac < 1:2218588/150‑1 (MQ=255) tCAACATTGGCCATAAATTCTCTCCTTTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGACTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAg < 2:3673193/150‑1 (MQ=255) tCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAg > 1:4148243/1‑150 (MQ=255) tCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAg > 1:4147067/1‑150 (MQ=255) tCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAg < 1:4115779/150‑1 (MQ=255) tCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAAATGCAGCTAACGGCCTGCATAATGAAAGACGACAg > 2:2262847/1‑150 (MQ=255) aaCATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGt < 1:3182530/150‑1 (MQ=255) aCATTGGCCATAAATTATCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTa < 2:1152492/150‑1 (MQ=255) aCATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTa > 2:1280738/1‑150 (MQ=255) aCATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTa < 2:4279700/150‑1 (MQ=255) aCATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTa < 2:2514809/150‑1 (MQ=255) aCATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTa < 2:4128621/150‑1 (MQ=255) cATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTaa > 1:4262128/1‑150 (MQ=255) ttGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAat > 1:1670242/1‑150 (MQ=255) ttGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAat > 2:611146/1‑150 (MQ=255) tGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAatt > 2:373650/1‑150 (MQ=255) tGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAatt > 1:2668056/1‑150 (MQ=255) ggCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAatta < 2:3943025/150‑1 (MQ=255) ggCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAatta > 1:554222/1‑150 (MQ=255) ggCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAatta > 1:554237/1‑150 (MQ=255) gCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAattat > 1:349650/1‑150 (MQ=255) ccATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAattatt < 2:762037/150‑1 (MQ=255) ccATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAattatt > 2:3033056/1‑150 (MQ=255) cATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTAttt > 1:3371099/1‑150 (MQ=255) aaaTTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGcc > 1:2020700/1‑150 (MQ=255) aaaTTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGcc < 2:764409/150‑1 (MQ=255) aaaTTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGcc < 2:4092358/150‑1 (MQ=255) ttAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCcgcg < 2:2020420/150‑1 (MQ=255) gCTCCTGATTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCAc < 2:933695/150‑1 (MQ=255) tttttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGc < 2:499479/150‑1 (MQ=255) ttttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCa < 1:4331865/150‑1 (MQ=255) tttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCaa < 2:1758093/150‑1 (MQ=255) tttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCaa > 1:436972/1‑150 (MQ=255) ttttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAg > 2:2607254/1‑150 (MQ=255) tttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGt < 1:3052028/150‑1 (MQ=255) ttACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGTCAGGTAAATTATTTGCCGCGCACCAAAGGCAAGtt > 1:3675593/1‑150 (MQ=255) aCCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGtttt > 2:3898748/1‑150 (MQ=255) cccTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTc < 2:2579999/150‑1 (MQ=255) tGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGcc > 1:2272537/1‑150 (MQ=255) tGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGcc < 1:1298008/150‑1 (MQ=255) gAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGcca > 2:255660/1‑150 (MQ=255) aTTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGccagcc > 1:3436948/1‑150 (MQ=255) aTGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCcagcccagcc < 2:286852/150‑1 (MQ=255) tGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCccagcca < 1:3635362/150‑1 (MQ=255) ttGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCcagccagc < 1:296557/150‑1 (MQ=255) gcggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACTATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCct < 1:4458174/150‑1 (MQ=255) gcggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCct < 1:3944861/150‑1 (MQ=255) gcggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCct < 1:3944764/150‑1 (MQ=255) cggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCctt > 2:2250831/1‑150 (MQ=255) ggcAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCcttc < 1:2488800/150‑1 (MQ=255) aaaaTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAg < 1:1592516/150‑1 (MQ=255) aTGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCAc > 2:2620960/1‑150 (MQ=255) tGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACg < 1:820932/150‑1 (MQ=255) tgtCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATAc > 1:2889676/1‑150 (MQ=255) tgtCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATAc > 1:2475974/1‑150 (MQ=255) gtCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACt < 2:2196538/150‑1 (MQ=255) ccccAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTg > 2:3515210/1‑150 (MQ=255) cccAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTgc > 1:136133/1‑150 (MQ=255) gAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCaa > 1:2138504/1‑150 (MQ=255) aaGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCaaa > 1:3169753/1‑150 (MQ=255) aGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCaaaa > 1:3727153/1‑150 (MQ=255) aGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCaaaa > 1:625624/1‑150 (MQ=255) gCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAAc < 2:155103/150‑1 (MQ=255) ttATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCa > 2:1812201/1‑150 (MQ=255) tataACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAg > 1:822868/1‑150 (MQ=255) taACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCt > 1:173852/1‑150 (MQ=255) taACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCt > 1:173781/1‑150 (MQ=255) aaCAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCta > 1:1798431/1‑149 (MQ=255) cAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTc < 1:3166001/150‑1 (MQ=255) aaTAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCg < 2:857504/150‑1 (MQ=255) aTAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGt < 1:3033056/150‑1 (MQ=255) cTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGt > 1:1472346/1‑150 (MQ=255) gggggCCTAATTGCAGCTAACGGCCTGCATACTGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGttt < 1:2813983/150‑1 (MQ=255) gggggCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGttt > 2:430665/1‑150 (MQ=255) gggggCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGttt > 2:430712/1‑150 (MQ=255) gCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAg < 2:3320894/150‑1 (MQ=255) gCCTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAg < 2:4147067/150‑1 (MQ=255) ccTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAgg > 1:909097/1‑150 (MQ=255) ccTAATTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAgg > 2:3340325/1‑150 (MQ=255) aTTGCATCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTcc < 2:3204293/150‑1 (MQ=255) aTTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTcc > 1:424039/1‑150 (MQ=255) aTTGCAGCTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTcc < 2:3204082/150‑1 (MQ=255) gCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCAc > 1:365416/1‑150 (MQ=255) cTAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACt < 2:4329754/150‑1 (MQ=255) tAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTg > 1:1158449/1‑150 (MQ=255) tAACGGCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTg > 1:3639171/1‑150 (MQ=255) ggCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATg > 1:2228087/1‑150 (MQ=255) ggCCTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATg < 1:2620960/150‑1 (MQ=255) ccTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGcc < 2:2668056/150‑1 (MQ=255) cTGCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCa > 2:2513869/1‑150 (MQ=255) gCATAATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGa > 1:732866/1‑150 (MQ=255) | CTTTGGTATAGATTTCAACATTGGCCATAAATTAGCTCCTGTTTTTTTACCCTGAAATTTCATGTTGCAGGGCGGCAGCAAAATGGAGTGTCCCCAGAAGCTTATAACAATAAGTCGCTGGGGGCCTAATTGCAGCTAACGGCCTGCATCATGAAAGACGACAGGTAAATTATTTGCCGCGCACCAAAGGCAAGTTTTCGCCAGCCCAGCCAGCGACGCCTTCTTTCAGCACGAATACTTGCGCAAAACCAGCTTTCGTCAGTGCGTTTGCAGGCTCCTGGCACTGCATGCCAGAACC > CP009273/3777775‑3778072 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |