| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,916,052 | C→A | 17.1% | intergenic (‑252/+365) | atpI ← / ← rsmG | ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,916,052 | 0 | C | A | 17.1% | 922.3 / 123.5 | 309 | intergenic (‑252/+365) | atpI/rsmG | ATP synthase, membrane‑bound accessory factor/16S rRNA m(7)G527 methyltransferase, SAM‑dependent; glucose‑inhibited cell‑division protein |
| Reads supporting (aligned to +/- strand): ref base C (139/117); new base A (24/29); total (163/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01 | |||||||||||
Only 100 of 309 total aligned reads displayed.
GCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTA > CP009273/3915904‑3916199 | ccGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATc > 1:706487/1‑150 (MQ=255) gTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcac > 1:2949280/1‑150 (MQ=255) gTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATcac < 2:1632089/150‑1 (MQ=255) tttCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACatat < 1:2704086/150‑1 (MQ=255) tttCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACatat < 1:2794884/150‑1 (MQ=255) ttCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATAtt > 1:773353/1‑150 (MQ=255) tCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTg < 1:644772/150‑1 (MQ=255) tCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTg < 1:3058998/150‑1 (MQ=255) tCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTg < 1:3058761/150‑1 (MQ=255) cAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTgc > 1:1228395/1‑150 (MQ=255) aaaCAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTgcg < 1:3075895/150‑1 (MQ=255) cAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCAt > 1:2239318/1‑150 (MQ=255) aaTAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATg > 1:2673677/1‑150 (MQ=255) tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGtt > 2:2947229/1‑150 (MQ=255) tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGtt < 1:2550628/150‑1 (MQ=255) tAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGtt < 2:349006/150‑1 (MQ=255) aaGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTc > 1:2763779/1‑150 (MQ=255) aaGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTc < 2:4495301/150‑1 (MQ=255) ccAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGcac > 2:962037/1‑150 (MQ=255) aaaGGTGAATAACTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGATCGATCATGAAAAACTGTAAAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAg < 2:552054/150‑1 (MQ=255) aaaGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGc > 2:3212344/1‑150 (MQ=255) ggTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCata > 2:1269645/1‑150 (MQ=255) ggTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATCGCGCATGTTCGCGCACAGCata < 2:3375863/150‑1 (MQ=255) gTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCatat < 1:2896555/150‑1 (MQ=255) tGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCAtatt < 1:3777779/150‑1 (MQ=255) aTAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatttat > 1:2725899/1‑150 (MQ=255) aTAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatttat > 2:2879266/1‑150 (MQ=255) tAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCAtatttatt < 1:3314100/150‑1 (MQ=255) aaaTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATatttattt > 2:526329/1‑150 (MQ=255) aaaTGTTTAAATATTTTTCCAGGGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATatttattt < 2:4537981/150‑1 (MQ=255) aaTGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATAtttattta > 1:4126227/1‑150 (MQ=255) tGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACt < 1:3431822/150‑1 (MQ=255) tGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACt < 1:1699699/150‑1 (MQ=255) gTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACtt > 1:3159400/1‑150 (MQ=255) gTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACtt > 1:878655/1‑150 (MQ=255) gTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACtt < 1:261677/150‑1 (MQ=255) aaTATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCaa > 2:2941219/1‑150 (MQ=255) atatTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCaaa > 1:1946718/1‑150 (MQ=255) tatTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAat < 2:40551/150‑1 (MQ=255) ttttCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAatgat < 1:1404425/150‑1 (MQ=255) ttCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGc > 1:4354700/1‑150 (MQ=255) cAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGGGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCtt > 1:975365/1‑150 (MQ=255) cATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCaa > 1:4240749/1‑150 (MQ=255) cATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCaa > 1:2993085/1‑150 (MQ=255) cATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCaa < 1:205949/150‑1 (MQ=255) aTACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACGGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAg < 2:4027372/150‑1 (MQ=255) aCAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGtt < 1:1710622/150‑1 (MQ=255) cAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGttt < 2:2108134/150‑1 (MQ=255) cAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGttt > 1:356559/1‑150 (MQ=255) aaTTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTa > 2:1336602/1‑150 (MQ=255) ttGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATg < 1:537594/150‑1 (MQ=255) tGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGa > 2:810250/1‑150 (MQ=255) gCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGat < 2:2992853/150‑1 (MQ=255) gACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGatat < 2:1826870/150‑1 (MQ=255) aCTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAtt > 1:385983/1‑150 (MQ=255) cTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAttt < 2:3159384/150‑1 (MQ=255) cTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATAttt < 2:878655/150‑1 (MQ=255) ttttCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTc > 2:1426720/1‑150 (MQ=255) ttttCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTc > 2:2285518/1‑150 (MQ=255) tttCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCa < 1:1568367/150‑1 (MQ=255) tAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTaaa < 2:4235481/150‑1 (MQ=255) aaCCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTaaaa < 1:4040781/150‑1 (MQ=255) aCCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTaaaaa > 2:3424433/1‑150 (MQ=255) cccTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAAc < 1:1016756/150‑1 (MQ=255) cccTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAAc < 1:935428/150‑1 (MQ=255) gTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGAt < 1:4306131/150‑1 (MQ=255) gTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGAt < 1:676670/150‑1 (MQ=255) tCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATAc > 1:2587653/1‑150 (MQ=255) cGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACt < 2:2725842/150‑1 (MQ=255) cGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACt < 2:2725912/150‑1 (MQ=255) tCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGtt > 2:4206793/1‑150 (MQ=255) tCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGtt < 1:586092/150‑1 (MQ=255) aTGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGtttt > 1:4177299/1‑150 (MQ=255) tGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTta < 2:2630938/150‑1 (MQ=255) tGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTta > 2:1133657/1‑150 (MQ=255) tGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTta < 2:706487/150‑1 (MQ=255) tGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTta > 2:245103/1‑150 (MQ=255) aaaaaCTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTtaat < 2:3818129/150‑1 (MQ=255) aaaaaCTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTtaat < 2:1563952/150‑1 (MQ=255) aCTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAAt > 1:4261784/1‑150 (MQ=255) tGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGa > 2:3964342/1‑150 (MQ=255) tGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGa > 2:3618835/1‑150 (MQ=255) aTAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACAttt > 1:113628/1‑150 (MQ=255) aTAACGCGTAAACACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACAttt > 2:3422552/1‑150 (MQ=255) aaCGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTac > 1:1175389/1‑150 (MQ=255) gcgTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGtttt < 1:3674/131‑1 (MQ=255) gcgTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTAcaca > 1:2492608/1‑150 (MQ=255) aaaCACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACAcaacaa < 2:1779091/150‑1 (MQ=255) aaCACTGGTGATAAAGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACaaa < 1:3198625/150‑1 (MQ=255) tGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAacca > 2:1939526/1‑150 (MQ=255) ggTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAaccac < 2:1083649/150‑1 (MQ=255) tGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCAccc < 1:3158830/150‑1 (MQ=255) gATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCa > 1:1474465/1‑150 (MQ=255) aTAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCAt > 2:432913/1‑150 (MQ=255) aTAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCAt > 2:1467491/1‑150 (MQ=255) aaaGCGAGCTTCAGAAAAAATAATGCGCATCTTCTCGCACAGCATAATAATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACAGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTg < 2:2478092/150‑1 (MQ=255) aaGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGa > 1:301634/1‑150 (MQ=255) aGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGAc < 2:3340307/150‑1 (MQ=255) aGCGTGCTTAAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGAc > 1:4326984/1‑150 (MQ=255) cGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACAt < 2:2303494/150‑1 (MQ=255) | GCCCCCGTGATTTCAAACAATAAGTAGCCAAAAGGTGAATAAATGTTTAAATATTTTTCCAGTGCATACAATTGCGACTTTTCTGCTAACCCTGTTCGATCATGAAAAACTGT‑AAATAACGCGTAAACACTGGTGATAAAGCGTGCTTCAGATCACATATTGCGCATGTTCGCGCACAGCATATTTATTTACTTGGCAAATGATGCCTTTGCAAGTTTATGATATTTCAGTCTAAAAACAGATACTGTTTTAATAAATGACATTTACACAACAAAAACCACCCATTGACATTTTTA > CP009273/3915904‑3916199 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |