| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,237,418 | C→A | 5.5% | S236* (TCG→TAG) | malK → | fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,237,418 | 0 | C | A | 5.5% | 1039.4 / 23.9 | 274 | S236* (TCG→TAG) | malK | fused maltose transport subunit, ATP‑binding component of ABC superfamily/regulatory protein |
| Reads supporting (aligned to +/- strand): ref base C (120/139); new base A (5/10); total (125/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
Only 100 of 284 total aligned reads displayed.
AATGATTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTC > CP009273/4237269‑4237567 | aaTGATTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTc < 1:354937/150‑1 (MQ=255) aTTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCa < 1:4106493/150‑1 (MQ=255) aTTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCa < 1:1865659/150‑1 (MQ=255) cGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGAt < 1:565323/150‑1 (MQ=255) cGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGAt > 1:971780/1‑150 (MQ=255) aCCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAAc < 2:3625736/150‑1 (MQ=255) cccACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACt < 1:4199100/150‑1 (MQ=255) cACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTc > 1:1389397/1‑150 (MQ=255) cACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTc > 1:2639689/1‑150 (MQ=255) cACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTc > 2:3712990/1‑150 (MQ=255) cACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTc < 2:3895038/150‑1 (MQ=255) cACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTc < 2:3895153/150‑1 (MQ=255) cGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCt < 1:1692677/150‑1 (MQ=255) cGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTACt < 1:3793688/150‑1 (MQ=255) cGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTAGCCAAAGATGAACTTCCt > 2:4303690/1‑150 (MQ=255) aTCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGc > 1:3420212/1‑150 (MQ=255) cAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCg > 1:4381803/1‑150 (MQ=255) cAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTAGCCAAAGATGAACTTCCTGCCg < 1:2512372/150‑1 (MQ=255) tCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTaa > 1:1490124/1‑150 (MQ=255) aGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGt < 1:2094063/150‑1 (MQ=255) aGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTAGCCAAAGATGAACTTCCTGCCGGTAAAAGt < 2:1939794/150‑1 (MQ=255) gATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGAc < 1:179342/150‑1 (MQ=255) aTGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGAcc < 1:1616443/150‑1 (MQ=255) tGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCg > 2:3187714/1‑150 (MQ=255) ggCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTAGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGc > 1:1418109/1‑150 (MQ=255) ccGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCaa > 1:23062/1‑150 (MQ=255) ccGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCaa > 1:23307/1‑150 (MQ=255) gACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGTTAAAAGTGACCGCCACCGCAATc < 1:4456417/150‑1 (MQ=255) cAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGa < 2:1626757/150‑1 (MQ=255) aaaTCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATc > 1:220969/1‑150 (MQ=255) aaaTCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATc > 1:2349669/1‑150 (MQ=255) aaaTCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATc < 2:3943786/150‑1 (MQ=255) aaTCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCa > 1:2396799/1‑150 (MQ=255) cGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGt < 1:3100701/150‑1 (MQ=255) ggACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGa < 2:192417/150‑1 (MQ=255) ggACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGa < 1:799344/150‑1 (MQ=255) aCGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGGAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGc > 2:2966529/1‑150 (MQ=255) cGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCt > 2:2736429/1‑150 (MQ=255) gCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTg < 1:3295282/150‑1 (MQ=255) tCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGAt < 2:4183869/150‑1 (MQ=255) tCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGAt < 2:4183926/150‑1 (MQ=255) cgTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGcc > 2:1891620/1‑150 (MQ=255) cgTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGcc > 2:1247535/1‑150 (MQ=255) cgTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGcc < 2:718628/150‑1 (MQ=255) gTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCa < 1:3217447/150‑1 (MQ=255) cgcAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATc > 1:1288631/1‑150 (MQ=255) cgcAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATc > 1:3204664/1‑150 (MQ=255) gcAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCg < 1:1955732/150‑1 (MQ=255) cAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGt > 2:180386/1‑150 (MQ=255) ggTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCa < 1:2500212/150‑1 (MQ=255) ttGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGc < 1:2739779/150‑1 (MQ=255) ttGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGc < 1:2739611/150‑1 (MQ=255) tGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCa > 2:2796450/1‑150 (MQ=255) ggAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAg > 1:1441163/1‑150 (MQ=255) ggAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAg > 1:4530225/1‑150 (MQ=255) aaCCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCt < 1:2935669/150‑1 (MQ=255) aaCCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCt < 2:1943991/150‑1 (MQ=255) aCCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTg < 2:4323295/150‑1 (MQ=255) cTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTg < 2:1513811/150‑1 (MQ=255) cTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGCATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTTACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTg < 2:3773990/150‑1 (MQ=255) tGGATCTGTACCACTATCCGGCAGACCTTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAAATTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCATGTGCAGGTGGAGATGCAGATGCCAAATCGTCAGCAAGTCTGGCTGc < 2:4188356/150‑1 (MQ=255) tGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGc > 1:1765190/1‑150 (MQ=255) gAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCa < 2:1750977/150‑1 (MQ=255) gAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCa < 1:2036145/150‑1 (MQ=255) gCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGt > 2:3107142/1‑150 (MQ=255) gCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGt > 2:3065251/1‑150 (MQ=255) gCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGt > 2:2865943/1‑150 (MQ=255) tGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTg > 2:1412937/1‑150 (MQ=255) tGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTg < 1:1701515/150‑1 (MQ=255) aCCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGaaa < 2:4446492/150‑1 (MQ=255) ccACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAg > 1:1154947/1‑150 (MQ=255) tATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGt > 1:1745343/1‑150 (MQ=255) aTCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTg > 2:3457492/1‑150 (MQ=255) tCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGa < 1:4399735/150‑1 (MQ=255) tCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGa < 1:2155012/150‑1 (MQ=255) cGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATg < 1:1303373/150‑1 (MQ=255) gCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTc > 2:3902914/1‑150 (MQ=255) gCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTc > 1:1425608/1‑150 (MQ=255) gACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAg < 1:1978731/150‑1 (MQ=255) gTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTg < 2:508273/150‑1 (MQ=255) gTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTg > 2:1618782/1‑150 (MQ=255) tGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGc > 2:3840188/1‑150 (MQ=255) cGCCGGATTTATCGGTTAGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCaa < 1:1872737/150‑1 (MQ=255) ccGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAata > 1:4124291/1‑150 (MQ=255) cGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAatat > 1:3966957/1‑150 (MQ=255) ggATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATg > 2:1161066/1‑150 (MQ=255) ggATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATg > 1:4216203/1‑150 (MQ=255) ttATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCTAGGTTGGAGCCAATATGTCGc > 1:1729726/1‑150 (MQ=255) ttATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGc < 1:1330740/150‑1 (MQ=255) tATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCt < 2:3399713/150‑1 (MQ=255) aTCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTg < 1:1798516/150‑1 (MQ=255) ggTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGt < 2:2925248/150‑1 (MQ=255) gTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCATGTTGGAGCCAATATGTCGCTGGGTa < 2:221735/150‑1 (MQ=255) gTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTa < 2:3263609/150‑1 (MQ=255) gTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTa < 2:2349669/150‑1 (MQ=255) tCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCCATATGTCGCTGGGTAtt > 2:920685/1‑150 (MQ=255) cGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTc < 1:2646558/150‑1 (MQ=255) cGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTc > 2:1156985/1‑150 (MQ=255) cGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTc > 1:3624324/1‑150 (MQ=255) cGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTc > 1:3727921/1‑150 (MQ=255) | AATGATTTACGTCACCCACGATCAGGTCGAAGCGATGACGCTGGCCGACAAAATCGTGGTGCTGGACGCCGGTCGCGTGGCGCAGGTTGGGAAACCGCTGGAGCTGTACCACTATCCGGCAGACCGTTTTGTCGCCGGATTTATCGGTTCGCCAAAGATGAACTTCCTGCCGGTAAAAGTGACCGCCACCGCAATCGATCAAGTGCAGGTGGAGCTGCCGATGCCAAATCGTCAGCAAGTCTGGCTGCCAGTTGAAAGCCGTGATGTCCAGGTTGGAGCCAATATGTCGCTGGGTATTC > CP009273/4237269‑4237567 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |