Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,259,065 C→A 50.0% intergenic (‑125/‑277) yjbS ← / → aphA uncharacterized protein/acid phosphatase/phosphotransferase, class B, non‑specific

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,259,0650CA50.0% 102.9 / inf 328intergenic (‑125/‑277)yjbS/aphAuncharacterized protein/acid phosphatase/phosphotransferase, class B, non‑specific
Reads supporting (aligned to +/- strand):  ref base C (74/90);  new base A (61/102);  total (135/193)
Fisher's exact test for biased strand distribution p-value = 1.78e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.80e-01

Only 100 of 330 total aligned reads displayed.

TGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAATATAATCA  >  CP009273/4258916‑4259213
                                                                                                                                                     |                                                                                                                                                    
  cTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGt                                                                                                                                                    >  1:3658/1‑150 (MQ=255)
  cTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGt                                                                                                                                                    >  1:376415/1‑150 (MQ=255)
  cTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGt                                                                                                                                                    >  1:2342830/1‑150 (MQ=255)
   tATTCACATATGATATCTTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTa                                                                                                                                                   >  2:3491713/1‑150 (MQ=255)
    aTTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTAc                                                                                                                                                  >  2:2403028/1‑150 (MQ=255)
      tCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTAcag                                                                                                                                                >  1:1238472/1‑150 (MQ=255)
        acaTATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTAcagca                                                                                                                                              <  1:4159506/150‑1 (MQ=255)
         caTATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTAcagcag                                                                                                                                             <  1:559408/150‑1 (MQ=255)
          atatGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGa                                                                                                                                            <  1:1003174/150‑1 (MQ=255)
          atatGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGa                                                                                                                                            >  2:488707/1‑150 (MQ=255)
            atGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATa                                                                                                                                          <  2:1259724/150‑1 (MQ=255)
               atatatTCATATCATCATCTCCATCGCGAGTAATAAAATTAATAACCATTGTAGGTTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAAt                                                                                                                                       >  2:3125926/1‑150 (MQ=255)
                   atTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTc                                                                                                                                   >  1:2557562/1‑150 (MQ=255)
                    ttCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCt                                                                                                                                  <  2:2720300/150‑1 (MQ=255)
                    ttCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCt                                                                                                                                  <  2:432658/150‑1 (MQ=255)
                     tCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTa                                                                                                                                 <  1:3196466/150‑1 (MQ=255)
                     tCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTa                                                                                                                                 >  1:3448549/1‑150 (MQ=255)
                     tCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTa                                                                                                                                 >  1:2336042/1‑150 (MQ=255)
                      cATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTAt                                                                                                                                >  2:323725/1‑150 (MQ=255)
                       atatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATc                                                                                                                               >  2:3461472/1‑150 (MQ=255)
                       atatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATc                                                                                                                               <  1:2811021/150‑1 (MQ=255)
                       atatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATc                                                                                                                               >  2:2265956/1‑150 (MQ=255)
                       atatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATc                                                                                                                               >  2:692056/1‑150 (MQ=255)
                        tatCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCa                                                                                                                              <  1:3550267/150‑1 (MQ=255)
                         atcatcatcTCCATCGCGAGTACTAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCat                                                                                                                             >  2:2630756/1‑149 (MQ=255)
                         atcatcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCaa                                                                                                                             >  1:2758689/1‑150 (MQ=255)
                          tcatcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCaaa                                                                                                                            <  1:531565/150‑1 (MQ=255)
                             tcatcTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAAttt                                                                                                                         <  1:3079770/150‑1 (MQ=255)
                                  tcCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTc                                                                                                                    <  1:1117018/150‑1 (MQ=255)
                                  tcCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTc                                                                                                                    <  1:2177297/150‑1 (MQ=255)
                                    cATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCAt                                                                                                                  >  2:1841620/1‑150 (MQ=255)
                                    cATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCAt                                                                                                                  <  1:1775382/150‑1 (MQ=255)
                                          gAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCTTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCg                                                                                                            >  2:3950671/1‑150 (MQ=255)
                                            gTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAg                                                                                                          <  2:4232629/150‑1 (MQ=255)
                                            gTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAg                                                                                                          <  1:4374801/150‑1 (MQ=255)
                                              aataaAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                                                        >  2:2124994/1‑150 (MQ=255)
                                              aataaAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                                                        <  1:4216462/150‑1 (MQ=255)
                                              aataaAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGa                                                                                                        <  1:4468153/150‑1 (MQ=255)
                                                   aaTTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATtcat                                                                                                   <  1:330664/150‑1 (MQ=255)
                                                   aaTTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGGTCTATCAAATTTCGCTCATTTGCCGAGGATtcat                                                                                                   <  1:4422105/150‑1 (MQ=255)
                                                         tCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCataat                                                                                             <  2:2508278/150‑1 (MQ=255)
                                                           aCCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCAtaataa                                                                                           <  2:2571006/150‑1 (MQ=255)
                                                            ccATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATaaa                                                                                          <  2:3119751/150‑1 (MQ=255)
                                                             cATTGTAGGGTAGGGGGCTTGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAAc                                                                                         <  2:4045089/150‑1 (MQ=255)
                                                             cATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAAc                                                                                         >  1:3898101/1‑150 (MQ=255)
                                                              aTTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACg                                                                                        >  1:2126509/1‑150 (MQ=255)
                                                               ttGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGt                                                                                       >  1:1862955/1‑150 (MQ=255)
                                                                 gtagggtaggGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTaa                                                                                     <  2:158224/150‑1 (MQ=255)
                                                                    gggtagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAAt                                                                                  <  1:1923775/150‑1 (MQ=255)
                                                                       tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTaa                                                                               <  1:3800189/150‑1 (MQ=255)
                                                                       tagggGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTaa                                                                               <  1:480213/150‑1 (MQ=255)
                                                                          ggggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTAGCTCATTTGCCGAGGATTCATCATAATAATCGTAAAATTAATGt                                                                            >  2:2320385/1‑150 (MQ=255)
                                                                           gggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTa                                                                           <  1:841930/150‑1 (MQ=255)
                                                                            ggCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTAt                                                                          <  1:1978315/150‑1 (MQ=255)
                                                                             gCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATc                                                                         <  2:3421058/150‑1 (MQ=255)
                                                                              attgTCAATCATAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATcc                                                                        <  2:3018118/147‑1 (MQ=255)
                                                                               tGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCt                                                                       >  1:1369334/1‑150 (MQ=255)
                                                                               tGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCt                                                                       >  1:1754878/1‑150 (MQ=255)
                                                                                ggTCAATCAGAAATCATCTTTATAAACTTCTATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCtt                                                                      <  2:3064795/150‑1 (MQ=255)
                                                                                  tCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTAc                                                                    <  1:3609763/150‑1 (MQ=255)
                                                                                    aaTCAGATATCATCTTTATCAACTTCGATTGTTTTTTTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATATATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTATTGTATCCTTACAt                                                                  <  2:3172373/150‑1 (MQ=255)
                                                                                     aTCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATc                                                                 <  1:4062652/150‑1 (MQ=255)
                                                                                      tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCg                                                                >  1:2713585/1‑150 (MQ=255)
                                                                                      tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCg                                                                >  2:1060518/1‑150 (MQ=255)
                                                                                      tCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCg                                                                >  1:3047741/1‑150 (MQ=255)
                                                                                         gAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGt                                                             <  2:1822785/150‑1 (MQ=255)
                                                                                          aaaTCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGta                                                            >  1:2666824/1‑150 (MQ=255)
                                                                                          aaaTCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGta                                                            >  1:3738176/1‑150 (MQ=255)
                                                                                              catcTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGtaataa                                                        <  2:1896790/150‑1 (MQ=255)
                                                                                               atcTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATaaa                                                       <  1:1823570/150‑1 (MQ=255)
                                                                                                 cTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACa                                                     >  2:409784/1‑150 (MQ=255)
                                                                                                   ttATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACAtt                                                   <  1:386749/150‑1 (MQ=255)
                                                                                                    tataAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACAttt                                                  <  2:2437516/150‑1 (MQ=255)
                                                                                                     ataAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACAtttt                                                 <  1:3582238/150‑1 (MQ=255)
                                                                                                      taAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACAttttt                                                <  2:1348814/150‑1 (MQ=255)
                                                                                                        aaCTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTta                                              <  1:3718751/150‑1 (MQ=255)
                                                                                                         aCTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTtat                                             <  2:2625610/150‑1 (MQ=255)
                                                                                                            tCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACa                                          >  2:2415620/1‑150 (MQ=255)
                                                                                                               aTTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACaaaa                                       >  1:1460046/1‑150 (MQ=255)
                                                                                                                      ttGTAATGCTGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACa                                <  1:396038/150‑1 (MQ=255)
                                                                                                                       tGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAg                               >  2:204668/1‑150 (MQ=255)
                                                                                                                           aTGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAAc                           <  2:1026018/150‑1 (MQ=255)
                                                                                                                           aTGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAAc                           <  2:3658/150‑1 (MQ=255)
                                                                                                                           aTGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAAc                           <  2:376415/150‑1 (MQ=255)
                                                                                                                              cTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTa                        <  1:1238212/150‑1 (MQ=255)
                                                                                                                               tGTATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTAt                       <  2:3923804/150‑1 (MQ=255)
                                                                                                                                 tATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTAttt                     <  2:2339080/150‑1 (MQ=255)
                                                                                                                                 tATCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTAttt                     <  1:793361/150‑1 (MQ=255)
                                                                                                                                  aTCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTa                    >  1:1556784/1‑150 (MQ=255)
                                                                                                                                  aTCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTa                    >  2:1668219/1‑150 (MQ=255)
                                                                                                                                  aTCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTa                    <  1:692056/150‑1 (MQ=255)
                                                                                                                                  aTCATTAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTa                    <  1:2265956/150‑1 (MQ=255)
                                                                                                                                    cATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACt                  <  1:2848713/150‑1 (MQ=255)
                                                                                                                                       tAAGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTggg               >  1:1665206/1‑150 (MQ=255)
                                                                                                                                        aaGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGt              <  2:145765/150‑1 (MQ=255)
                                                                                                                                        aaGTTCATTAAATAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGt              >  2:1146594/1‑150 (MQ=255)
                                                                                                                                             cATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAat         <  2:3370812/150‑1 (MQ=255)
                                                                                                                                              aTTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAata        >  2:971763/1‑150 (MQ=255)
                                                                                                                                                tAAATCGTACAGCAGATAAATGGTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAAtata      <  2:2776069/150‑1 (MQ=255)
                                                                                                                                                 aaaTAGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAATATaa     >  1:888689/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TGCTATTCACATATGATATATTCATATCATCATCTCCATCGCGAGTAATAAAATTAATCACCATTGTAGGGTAGGGGGCTGGTCAATCAGAAATCATCTTTATAAACTTCGATTGTTTTTGTAATGCTGTATCATTAAGTTCATTAAATCGTACAGCAGATAAATGTTCTATCAAATTTCGCTCATTTGCCGAGGATTCATCATAATAAACGTAAAATTAATGTATCCTTACATCGAGTAATAAACATTTTTTATACAAAAAAAGACAGGAACGTATTTACTGGGTTAAATATAATCA  >  CP009273/4258916‑4259213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: