| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,259,874 | C→A | 8.1% | S178* (TCG→TAG) | aphA → | acid phosphatase/phosphotransferase, class B, non‑specific |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,259,874 | 0 | C | A | 8.1% | 1046.0 / 43.3 | 282 | S178* (TCG→TAG) | aphA | acid phosphatase/phosphotransferase, class B, non‑specific |
| Reads supporting (aligned to +/- strand): ref base C (119/140); new base A (8/15); total (127/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.84e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 283 total aligned reads displayed.
CCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTT > CP009273/4259725‑4260022 | ccgcGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATc > 1:4295624/1‑150 (MQ=255) cgcgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCg > 1:4276197/1‑150 (MQ=255) cgcgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCg > 1:836941/1‑150 (MQ=255) cgGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCa < 1:2299558/150‑1 (MQ=255) ggTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGGAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCaa > 2:1580099/1‑150 (MQ=255) gTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAAt < 2:896754/150‑1 (MQ=255) gTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAAt < 2:2983872/150‑1 (MQ=255) gACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATgg < 1:1271654/150‑1 (MQ=255) gcgATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAACACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATATACCAGGGCAAAATACAAAATCGCAATGGCTg < 1:2916170/150‑1 (MQ=255) gcgATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTg < 1:3945919/150‑1 (MQ=255) gATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCa > 1:3118354/1‑150 (MQ=255) gATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCa > 2:3556730/1‑150 (MQ=255) cttcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGa < 1:1813036/150‑1 (MQ=255) cttcttTGCGACAGGTCGTAGCCCGACGAAAACAGACACGGTTGCAAACCCGCTGGCGGAGAATTTTCACAGTCCTGCCACCCACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGa < 2:3341374/150‑1 (MQ=255) ttcttTGTGACTGGTCGTAGCCCGACGAAAGCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGAt < 1:3743750/150‑1 (MQ=255) tcttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATa < 1:4209658/150‑1 (MQ=255) cttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATaa > 2:913630/1‑150 (MQ=255) cttTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATaa < 1:1203705/150‑1 (MQ=255) gtgACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAat < 1:2093813/150‑1 (MQ=255) gACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAatat < 2:3193449/150‑1 (MQ=255) gACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAatat > 1:714943/1‑150 (MQ=255) aCTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATc < 2:2667965/150‑1 (MQ=255) ggTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGa > 2:2743350/1‑150 (MQ=255) ggTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGa > 2:2742518/1‑150 (MQ=255) ggTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGa < 1:1493207/150‑1 (MQ=255) ggTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGa > 2:1644946/1‑150 (MQ=255) gTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAttt > 1:1961067/1‑150 (MQ=255) gTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAttt > 2:665178/1‑150 (MQ=255) gTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAttt < 2:1118130/150‑1 (MQ=255) gTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAAttt < 2:2225919/150‑1 (MQ=255) aGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAAttttt < 2:4241679/150‑1 (MQ=255) cccGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTa > 1:1754461/1‑150 (MQ=255) cgacgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATg > 1:2526144/1‑150 (MQ=255) acgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGc < 1:870765/150‑1 (MQ=255) acgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGc < 1:2618480/150‑1 (MQ=255) acgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGc > 1:1275829/1‑150 (MQ=255) acgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGc < 1:3658957/150‑1 (MQ=255) cgaAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCg > 2:3274770/1‑150 (MQ=255) aaaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACCTGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:104606/150‑1 (MQ=255) aaaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:104669/150‑1 (MQ=255) aaaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 2:4179176/150‑1 (MQ=255) aaaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAt < 1:271571/150‑1 (MQ=255) aaaCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGAtt > 1:2227876/1‑150 (MQ=255) aCAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCt < 2:2633013/150‑1 (MQ=255) cAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTg < 1:3424020/150‑1 (MQ=255) gAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGAt > 1:1825086/1‑150 (MQ=255) gAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGAt > 1:743705/1‑150 (MQ=255) aaaCGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCACTGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATa < 2:3378640/150‑1 (MQ=255) aaaCGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATa < 2:581321/150‑1 (MQ=255) aCGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAAt > 1:1123368/1‑150 (MQ=255) aCGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAAt > 1:598563/1‑150 (MQ=255) ggTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGa < 1:2457839/150‑1 (MQ=255) gTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGat > 1:3969060/1‑150 (MQ=255) aaaCGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTAccg > 2:251098/1‑150 (MQ=255) aaaCGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTAccg > 2:1183902/1‑150 (MQ=255) cGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCAcgcg < 1:1081006/150‑1 (MQ=255) ggATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGa > 1:3210237/1‑150 (MQ=255) ggATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGa > 2:4485040/1‑150 (MQ=255) aTAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACAAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATg < 2:3707199/150‑1 (MQ=255) tAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGt < 2:1002204/150‑1 (MQ=255) tAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGt > 1:758846/1‑150 (MQ=255) aTTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCg > 2:2206345/1‑150 (MQ=255) ttCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGgcg > 2:3951240/1‑150 (MQ=255) cATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCt < 2:3524924/150‑1 (MQ=255) atatTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTc > 2:4235443/1‑150 (MQ=255) ccTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGt > 1:4480233/1‑150 (MQ=255) ccTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGt > 1:1587311/1‑150 (MQ=255) ccaccaACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATAACAGACGCACGCGATGTCGGCGCTCGTGGTATcc > 2:4410188/1‑150 (MQ=255) caccaACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCg > 1:4398604/1‑150 (MQ=255) accaACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGc > 2:2676688/1‑150 (MQ=255) cATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCt < 1:146556/150‑1 (MQ=255) cATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCt < 1:4150611/150‑1 (MQ=255) aTGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATGTTACCGCCGCACGCGATGTCGGCGCGCGTGGTATCCGCATTCTg > 1:2792451/1‑150 (MQ=255) aTGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTg > 2:4080438/1‑150 (MQ=255) aTGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTg < 2:714943/150‑1 (MQ=255) gAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATAGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTgcg < 2:2537142/150‑1 (MQ=255) aTCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTgcgcg > 1:3737781/1‑150 (MQ=255) ggTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTc > 1:1936582/1‑150 (MQ=255) gTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTcc > 2:1359976/1‑150 (MQ=255) cTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAActc < 1:4122683/150‑1 (MQ=255) ttGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTcta < 2:1898519/150‑1 (MQ=255) cGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTctacct > 1:3188140/1‑150 (MQ=255) gggCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTctaccta > 2:1980476/1‑150 (MQ=255) gATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaaa < 2:3036651/150‑1 (MQ=255) gATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaaa < 2:754994/150‑1 (MQ=255) gATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaaa < 1:356412/150‑1 (MQ=255) gATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaaa < 1:2652855/150‑1 (MQ=255) gATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACaaa < 1:2652838/150‑1 (MQ=255) tAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAATAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAAcc < 2:560461/150‑1 (MQ=255) aaaCCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAAccc > 1:495148/1‑150 (MQ=255) aCCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCtt < 2:2330695/150‑1 (MQ=255) aCCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCtt < 2:4109636/150‑1 (MQ=255) aCCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCtt < 2:1856183/150‑1 (MQ=255) aGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGcc < 1:3675155/150‑1 (MQ=255) aaTACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCg < 1:1429837/150‑1 (MQ=255) tACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCggg < 2:1754461/150‑1 (MQ=255) tACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCggg > 1:4320166/1‑150 (MQ=255) tACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCggg > 1:1336955/1‑150 (MQ=255) aCAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACACACCCTTGCCACAAGCGGGt < 2:2834670/150‑1 (MQ=255) tCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGttt > 2:1481302/1‑150 (MQ=255) | CCGCGGTGACGCGATCTTCTTTGTGACTGGTCGTAGCCCGACGAAAACAGAAACGGTTTCAAAAACGCTGGCGGATAATTTTCATATTCCTGCCACCAACATGAATCCGGTGATCTTTGCGGGCGATAAACCAGGGCAAAATACAAAATCGCAATGGCTGCAGGATAAAAATATCCGAATTTTTTATGGCGATTCTGATAATGATATTACCGCCGCACGCGATGTCGGCGCTCGTGGTATCCGCATTCTGCGCGCCTCCAACTCTACCTACAAACCCTTGCCACAAGCGGGTGCGTTT > CP009273/4259725‑4260022 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |