| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,335,003 | A→T | 6.9% | Y125N (TAC→AAC) | yjdF ← | DUF2238 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,335,003 | 0 | A | T | 6.9% | 813.6 / 35.7 | 246 | Y125N (TAC→AAC) | yjdF | DUF2238 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (101/127); new base T (12/5); total (113/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 247 total aligned reads displayed.
TCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGC > CP009273/4334855‑4335152 | tCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTAc < 1:4142580/150‑1 (MQ=255) cccACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACa < 2:2598818/150‑1 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATcc > 2:1782214/1‑150 (MQ=255) aCTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATcc < 2:4456433/150‑1 (MQ=255) tGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCcg < 1:414740/150‑1 (MQ=255) tGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCcg < 1:410025/150‑1 (MQ=255) cGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGaa > 1:557313/1‑150 (MQ=255) cGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGaa > 1:3760693/1‑150 (MQ=255) gCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAAc < 2:2944023/150‑1 (MQ=255) gCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCATATCGCCAGCGCCACGCCGCAGACCAGGAACGCCACCAGTTTACGTCCGCGCACGTACATCCCGCGAAc > 1:3722976/1‑150 (MQ=255) cccTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACg > 1:1119306/1‑150 (MQ=255) cTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACgag < 2:2347498/150‑1 (MQ=255) tGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACgaga < 2:915352/150‑1 (MQ=255) tGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACgaga < 1:2504349/150‑1 (MQ=255) gggTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGaa < 1:4057088/150‑1 (MQ=255) gggTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGaa > 1:75112/1‑150 (MQ=255) gggTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGaa < 1:2779007/150‑1 (MQ=255) ggTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAAt < 2:2414646/150‑1 (MQ=255) tGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAAttt < 1:1636344/150‑1 (MQ=255) tGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAAttt > 1:1778932/1‑150 (MQ=255) tGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAAttt > 1:4278442/1‑150 (MQ=255) ccGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtct < 2:62075/150‑1 (MQ=255) ccGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtct > 1:2753114/1‑150 (MQ=255) cGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTtctc > 1:4519941/1‑150 (MQ=255) gagaAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCg > 2:1580550/1‑150 (MQ=255) agaAACTCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCCTATCGCCAGCGCCACGCAGCAGACCATGATCGCCACCTTTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGt < 2:1494761/150‑1 (MQ=255) agaAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGt < 2:2448008/150‑1 (MQ=255) agaAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGt < 2:2447891/150‑1 (MQ=255) agaAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGt > 2:4466280/1‑150 (MQ=255) tcCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGt < 1:1428963/150‑1 (MQ=255) tCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAgg > 1:1187831/1‑150 (MQ=255) cccTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGc > 2:1498721/1‑150 (MQ=255) aCCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAg < 2:1128653/150‑1 (MQ=255) cccATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGc > 2:4263673/1‑150 (MQ=255) cATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGccc > 2:3635093/1‑150 (MQ=255) tGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTg > 1:4472510/1‑150 (MQ=255) tGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCGTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTg < 2:3411791/150‑1 (MQ=255) ccAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGAAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGa > 2:12302/1‑150 (MQ=255) cAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaa > 1:2437287/1‑150 (MQ=255) aGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaaa < 1:2391548/150‑1 (MQ=255) aGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaaa > 1:931317/1‑150 (MQ=255) gcgcTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGacaa > 1:3191757/1‑150 (MQ=255) gcgcTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGaaaa > 1:3192714/1‑150 (MQ=255) tGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTg > 1:1362779/1‑150 (MQ=255) ccaccaCTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGccc < 2:3190730/150‑1 (MQ=255) tCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTg > 1:1123707/1‑150 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc > 1:3499372/1‑150 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc > 1:3499345/1‑150 (MQ=255) gATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTc > 1:3097910/1‑150 (MQ=255) aTTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTGCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCa < 1:3376458/150‑1 (MQ=255) tAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATa < 1:618143/150‑1 (MQ=255) tAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATa < 1:4402457/150‑1 (MQ=255) tAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATa < 2:254514/150‑1 (MQ=255) aTTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACg > 1:4357580/1‑150 (MQ=255) tACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTa > 2:1081321/1‑150 (MQ=255) tACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTa < 2:9382/150‑1 (MQ=255) tCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGAc < 1:212669/150‑1 (MQ=255) cgcgCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACt < 1:1959644/150‑1 (MQ=255) cgcgCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACt > 2:1179355/1‑150 (MQ=255) cgcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCa > 1:1649379/1‑150 (MQ=255) cgcTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCa < 1:1689435/150‑1 (MQ=255) tATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAccc < 1:907192/150‑1 (MQ=255) tATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAccc > 1:2718441/1‑150 (MQ=255) aTCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAcccc > 1:303015/1‑150 (MQ=255) aTCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAcccc > 1:216837/1‑150 (MQ=255) aTCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAAcccc > 1:3134367/1‑150 (MQ=255) tCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCa < 2:2037550/150‑1 (MQ=255) cGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAg > 1:1276772/1‑150 (MQ=255) gCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGc > 1:3364650/1‑150 (MQ=255) gCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGc < 2:2693072/150‑1 (MQ=255) aGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCAt > 1:4211172/1‑150 (MQ=255) gcgcCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCAtt < 2:4138335/150‑1 (MQ=255) ccACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCt > 2:4108496/1‑150 (MQ=255) cACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTg < 1:2970661/150‑1 (MQ=255) aCGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGc < 1:387004/150‑1 (MQ=255) agcagACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCt > 1:3573255/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa > 1:974084/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa > 1:3957858/1‑150 (MQ=255) agACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaa < 2:3828762/150‑1 (MQ=255) aCCAGGAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaaaa > 2:2012836/1‑150 (MQ=255) aCCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCaaaa < 2:4275389/150‑1 (MQ=255) ccAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAAc > 1:2642277/1‑150 (MQ=255) ccAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAAc > 1:788640/1‑150 (MQ=255) ggAACGCCACCATTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCaa > 2:749927/1‑150 (MQ=255) ggAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGACAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCaa > 1:1666752/1‑150 (MQ=255) ggAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCaa > 2:494382/1‑150 (MQ=255) ggAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCaa > 2:494715/1‑150 (MQ=255) aaCGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACg > 1:3571983/1‑150 (MQ=255) aCGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACgg < 1:2883521/150‑1 (MQ=255) cGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACggg < 1:2744739/150‑1 (MQ=255) cGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACggg < 1:225814/150‑1 (MQ=255) ccaccaTTTTACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGa > 2:1336076/1‑150 (MQ=255) ttttACGTCCGCGCACGTTCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTcg < 1:4242345/150‑1 (MQ=255) ttttACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTcg < 1:3362161/150‑1 (MQ=255) cGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAg > 1:1314630/1‑150 (MQ=255) cGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAg < 1:57801/150‑1 (MQ=255) cGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAg < 1:57753/150‑1 (MQ=255) tACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTccg < 1:1713694/150‑1 (MQ=255) tACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTccg < 2:1461336/150‑1 (MQ=255) aCATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTccgc < 2:3347976/150‑1 (MQ=255) | TCCCACTGGTCGCCCTGGGTGCCGAGAAAATCATCCGCTCCCTGACCCATTGCCAGCGCTGCCCACCACTCGATTAATTCATACATCGCGCTTATCGCCAGCGCCACGCAGCAGACCAGGAACGCCACCATTTTACGTCCGCGCACGTACATCCCGCGAACGAGAATTTCTCGTGCCACCAGTGCAGGCACCAGCCCCTGGAAAAAGTGCCCCAGCTTGTCATACGGATTACGACTCAACCCCAGCCATTCCTGCACCTCAAAACCAACGGGGACTTTCGCGTAGGTGTATTGTCCGC > CP009273/4334855‑4335152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |