| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,435,607 | C→A | 8.4% | A560E (GCG→GAG) | tamB → | translocation and assembly module for autotransporter export, inner membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,435,607 | 0 | C | A | 8.4% | 835.8 / 35.9 | 227 | A560E (GCG→GAG) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (111/97); new base A (11/8); total (122/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01 | |||||||||||
Only 100 of 231 total aligned reads displayed.
TGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGAAAC > CP009273/4435460‑4435756 | tGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGa < 1:588422/150‑1 (MQ=255) ggATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGc > 2:3769109/1‑150 (MQ=255) gatgatCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCt < 2:2325708/150‑1 (MQ=255) atgatCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTg < 1:2426052/150‑1 (MQ=255) gatCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGt < 1:1300672/150‑1 (MQ=255) gatCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGt < 1:3571744/150‑1 (MQ=255) gatCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGt > 1:1861456/1‑150 (MQ=255) tCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGa < 2:743764/150‑1 (MQ=255) cccAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGaa > 2:3538884/1‑150 (MQ=255) ccAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGaaa > 1:4253406/1‑150 (MQ=255) ccAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGaaa > 1:320811/1‑150 (MQ=255) aGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGt > 2:4183991/1‑150 (MQ=255) aGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGt < 1:742510/150‑1 (MQ=255) gggCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTa > 1:4485513/1‑150 (MQ=255) gggttCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTAc > 1:2901744/4‑150 (MQ=255) ggCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTAc < 1:73728/150‑1 (MQ=255) gCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTAcg < 2:1885576/150‑1 (MQ=255) cATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGc > 1:2268948/1‑150 (MQ=255) aTCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCa < 2:141785/150‑1 (MQ=255) cTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACg > 2:3716205/1‑150 (MQ=255) ggAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGt > 1:2740451/1‑150 (MQ=255) ggAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGt > 1:2740525/1‑150 (MQ=255) aaCTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTgg > 1:3623655/1‑150 (MQ=255) aaCTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTgg > 2:1140464/1‑150 (MQ=255) cTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGaa < 2:933814/150‑1 (MQ=255) cTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGaa < 1:3769160/150‑1 (MQ=255) tCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAg < 2:2365827/150‑1 (MQ=255) cGGGCCAAACAGTGCCGAAGTGTAAGGCGATCTTGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAgc < 2:3673545/150‑1 (MQ=255) agggCCAAACAGTGCCGAAGTGTAAGGCGATCTGGGGGTTAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAgc < 2:3673519/149‑1 (MQ=255) ccAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCca > 2:2422981/1‑150 (MQ=255) aaaCAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGACGCGCcaca > 2:4157125/1‑150 (MQ=255) aCAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAac > 1:3648592/1‑150 (MQ=255) aGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAacta > 2:4258927/1‑150 (MQ=255) tGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAactact < 2:2206333/150‑1 (MQ=255) tGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAactact > 1:617294/1‑150 (MQ=255) ccGTAGTGAAAGGCGAGCTGGGGGTTATAGATCTCTATCTTGATGACACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAATGTGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTgg < 2:1972298/150‑1 (MQ=255) ccGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTgg < 2:2286640/150‑1 (MQ=255) gTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGat > 1:2662571/1‑150 (MQ=255) gTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGat < 1:1165076/150‑1 (MQ=255) tGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGata < 1:848006/150‑1 (MQ=255) gAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGatat < 2:2786187/150‑1 (MQ=255) gAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGatat < 2:2786315/150‑1 (MQ=255) ggCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCAcc < 2:496548/150‑1 (MQ=255) gAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcg < 1:4204160/150‑1 (MQ=255) gAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcg < 1:4203693/150‑1 (MQ=255) gAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcg > 2:108697/1‑150 (MQ=255) gAGCGGGGGGTAAAAGATCTCAATCTTGATGCCACCAACAACGCGCCGGGGCTGGATAACGCGCTGCAGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACTCGGCACGGTGGAAGCGCCACAACTACTGTCAGATATCACcgcg > 2:4013072/1‑150 (MQ=255) aGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcgc > 1:805739/1‑150 (MQ=255) aGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcgc > 1:3087422/1‑150 (MQ=255) tGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACcgcgcgcg > 1:371048/1‑150 (MQ=255) gggggTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCgg > 1:1361082/1‑150 (MQ=255) gggTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGcc > 2:1716906/1‑150 (MQ=255) aaGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCt < 1:4411282/150‑1 (MQ=255) aaGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCt > 1:120888/1‑150 (MQ=255) aaGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCt < 1:1719242/150‑1 (MQ=255) aaGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCt < 1:1712844/150‑1 (MQ=255) aGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTg > 2:4482481/1‑150 (MQ=255) gATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTgg > 2:798713/1‑150 (MQ=255) gATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTgg > 2:1626331/1‑150 (MQ=255) tctcAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCa < 1:74626/150‑1 (MQ=255) tctcAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCa > 2:1443180/1‑150 (MQ=255) ctcAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAg < 1:1363924/150‑1 (MQ=255) ctcAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAg > 1:3382059/1‑150 (MQ=255) cAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGa > 2:2220361/1‑150 (MQ=255) aTCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAAc < 2:3310670/150‑1 (MQ=255) tGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTc > 1:150537/1‑150 (MQ=255) tGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTc > 1:2939190/1‑150 (MQ=255) aTGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCg < 1:1139935/150‑1 (MQ=255) aTGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCg < 2:246235/150‑1 (MQ=255) gCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTg > 1:2166237/1‑150 (MQ=255) accaTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGgcg > 2:625627/1‑150 (MQ=255) accaTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGgcg < 2:4192983/150‑1 (MQ=255) ccaTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGAGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGgcgc > 2:3008032/1‑150 (MQ=255) caTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCa < 1:2577414/150‑1 (MQ=255) aTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAg > 2:2507514/1‑150 (MQ=255) aTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAg > 1:2020797/1‑150 (MQ=255) aTCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAg > 1:4016184/1‑150 (MQ=255) tCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAgg > 1:2800965/1‑150 (MQ=255) tCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAgg < 2:3741779/150‑1 (MQ=255) aaCGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGtt > 1:1034161/1‑150 (MQ=255) aCGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTc < 1:4224596/150‑1 (MQ=255) aCGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTc > 1:2128128/1‑150 (MQ=255) cGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTgg < 2:4066166/150‑1 (MQ=255) ggggCTGGATATCGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGa < 1:342698/150‑1 (MQ=255) ggggCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGa > 2:3255237/1‑150 (MQ=255) ggggCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGa > 2:3846911/1‑150 (MQ=255) gATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGat > 1:3165706/1‑150 (MQ=255) gATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGat > 1:3166055/1‑150 (MQ=255) aaCGCGCTGCCGGGGCTTGGCGGTACAGAGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATc > 2:1125902/1‑150 (MQ=255) aCGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCa < 2:3467827/150‑1 (MQ=255) ggggCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGa > 2:3815572/1‑150 (MQ=255) ggggCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGa > 1:3121695/1‑150 (MQ=255) gggCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGAt > 2:3266456/1‑150 (MQ=255) ttGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGa > 2:1917418/1‑150 (MQ=255) ttGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGa > 1:941090/1‑150 (MQ=255) tGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGAt > 1:1355760/1‑150 (MQ=255) ggTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGcc < 2:1260357/150‑1 (MQ=255) gTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCg < 2:2020797/150‑1 (MQ=255) cGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGacac > 2:2328857/1‑150 (MQ=255) cGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGAAAc > 1:1349560/1‑150 (MQ=255) | TGCAGTGGATGATCCCAGGGCTTCATCTGGAACTCGGGCCAAACAGTGCCGAAGTGAAAGGCGAGCTGGGGGTAAAAGATCTCAATCTTGATGCCACCATCAACGCGCCGGGGCTGGATAACGCGCTGCCGGGGCTTGGCGGTACAGCGAAAGGGCTGGTGAAAGTACGCGGCACGGTGGAAGCGCCACAACTACTGGCAGATATCACCGCGCGCGGCCTGCGCTGGCAGGAACTTTCCGTGGCGCAGGTTCGCGTGGAAGGCGATATCAAATCCACCGATCAGATCGCCGGGAAAC > CP009273/4435460‑4435756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |