| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,461,317 | G→T | 45.2% | A299E (GCG→GAG) | pyrB ← | aspartate carbamoyltransferase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,461,317 | 0 | G | T | 45.2% | 204.8 / inf | 281 | A299E (GCG→GAG) | pyrB | aspartate carbamoyltransferase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base G (95/59); new base T (64/63); total (159/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 281 total aligned reads displayed.
AGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCG > CP009273/4461170‑4461462 | aCTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTg > 1:4022757/1‑150 (MQ=255) tCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGgc < 2:1294551/150‑1 (MQ=255) tCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGgc < 1:2877757/150‑1 (MQ=255) tCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgc < 1:2448700/150‑1 (MQ=255) tCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgc < 1:144775/150‑1 (MQ=255) cAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGgcg > 2:2565735/1‑150 (MQ=255) aCAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGgcgag < 2:2083728/150‑1 (MQ=255) gCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcgagcga < 2:2245611/150‑1 (MQ=255) aCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATccc < 2:3487095/150‑1 (MQ=255) aCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATccc < 2:4126210/150‑1 (MQ=255) aCCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATccc < 2:2825541/150‑1 (MQ=255) gATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt > 1:3837760/1‑150 (MQ=255) gATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt < 1:3606646/150‑1 (MQ=255) tGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcct > 1:1675115/1‑150 (MQ=255) cGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTgcctgcct > 2:1853622/1‑150 (MQ=255) ggggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGcctgcctg > 1:2845654/1‑150 (MQ=255) ggggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGcctgcctg < 1:258392/150‑1 (MQ=255) ggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCctgct > 1:2405530/1‑150 (MQ=255) atatGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTgg > 1:3254382/1‑150 (MQ=255) ggTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGt > 1:2028671/1‑150 (MQ=255) cAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTAcc > 2:3054487/1‑150 (MQ=255) cAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTAcc > 1:2348855/1‑150 (MQ=255) aaTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa > 1:3946569/1‑150 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg < 2:1079178/150‑1 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg > 2:1140895/1‑150 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg < 2:1079371/150‑1 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg > 1:1342063/1‑150 (MQ=255) ttACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAgg < 2:3390965/150‑1 (MQ=255) tACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGGAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGc < 2:3332439/150‑1 (MQ=255) cGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCgtg > 1:489040/1‑150 (MQ=255) gcgTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGt < 2:4243677/150‑1 (MQ=255) tttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGtttt > 1:2936286/1‑150 (MQ=255) ttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTa > 2:1812064/1‑150 (MQ=255) ttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTa > 2:19833/1‑150 (MQ=255) ttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTa > 2:19922/1‑150 (MQ=255) aaTAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATc > 1:2786772/1‑150 (MQ=255) aaTAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATc > 2:2384475/1‑150 (MQ=255) aaTAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGAACCAGGCGTGTGGCGTTTTATc > 2:2384738/1‑150 (MQ=255) gCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACa > 2:917852/1‑150 (MQ=255) cTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt > 1:828700/1‑150 (MQ=255) ttCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATc < 1:524728/150‑1 (MQ=255) ttCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATc > 1:3501472/1‑150 (MQ=255) tCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATcc > 2:3401712/1‑150 (MQ=255) aaCCTGCAATTTATTATCGTGTGTCATCTCTATGTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGt < 2:3847933/150‑1 (MQ=255) ccTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCg < 2:1377012/150‑1 (MQ=255) cTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTAGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGc > 1:3667059/1‑150 (MQ=255) tttATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAtctc > 2:943920/1‑150 (MQ=255) ttattaTCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGAACCAGGCGGGTGGCGTTTTATCAACAACCGTCGCAATCtca > 2:773014/1‑150 (MQ=255) ttattaTCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtca > 2:300692/1‑150 (MQ=255) attatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCTATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatc > 2:317380/1‑150 (MQ=255) attatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCTTTTTATCAACATCCGTCGCAATCtcatc > 1:159265/1‑150 (MQ=255) ttatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatca > 2:2647665/1‑150 (MQ=255) atCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAac > 1:1767072/1‑150 (MQ=255) cGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAacac < 2:845756/150‑1 (MQ=255) tgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCgg > 2:4524147/1‑150 (MQ=255) gtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGc < 2:2767653/150‑1 (MQ=255) gtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGc < 2:2767509/150‑1 (MQ=255) cATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAg > 1:2429310/1‑150 (MQ=255) aTCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGc < 2:964758/150‑1 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCg < 1:1950613/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGAt < 1:3080876/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGAt < 1:3249259/150‑1 (MQ=255) ctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGAt > 1:1266221/1‑150 (MQ=255) tATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATg < 2:2147614/150‑1 (MQ=255) tATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATg < 1:753562/150‑1 (MQ=255) tATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATg > 1:7272/1‑150 (MQ=255) ttCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgcag > 1:3743265/1‑150 (MQ=255) cccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCAc > 1:4324142/1‑150 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTc < 1:2660639/150‑1 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTc > 2:2612954/1‑150 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTc > 2:2340861/1‑150 (MQ=255) aCAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCa > 2:2134550/1‑150 (MQ=255) cgTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCata < 2:3596145/149‑1 (MQ=255) aGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCata < 1:2671748/150‑1 (MQ=255) cAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGc > 1:1191320/1‑150 (MQ=255) cAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGc > 1:1119293/1‑150 (MQ=255) gATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAGCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCtt > 2:4410432/1‑150 (MQ=255) aTCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAATTCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCttt < 2:673033/150‑1 (MQ=255) tCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTg > 2:3290471/1‑150 (MQ=255) cgcgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg > 2:649094/1‑150 (MQ=255) cgcgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg > 2:2928973/1‑150 (MQ=255) gcgATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGc > 2:3149443/1‑150 (MQ=255) gcgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGc < 2:2434864/150‑1 (MQ=255) aTTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGtt < 1:1040940/150‑1 (MQ=255) cAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCATCACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 2:2301808/150‑1 (MQ=255) cAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGTGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg > 1:3524249/1‑150 (MQ=255) cAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 1:4410991/150‑1 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTgg < 2:1514098/150‑1 (MQ=255) ccAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGAt < 1:1777435/150‑1 (MQ=255) cAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc < 1:504719/150‑1 (MQ=255) cAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc < 1:47013/150‑1 (MQ=255) cAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc > 2:2103672/1‑150 (MQ=255) aGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg < 1:3476733/150‑1 (MQ=255) aGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg < 1:3018292/150‑1 (MQ=255) aGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg < 1:2188974/150‑1 (MQ=255) aGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg > 2:2357672/1‑150 (MQ=255) ccAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTgg < 1:4008745/150‑1 (MQ=255) cAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgc > 2:1764629/1‑150 (MQ=255) cAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgc > 2:3249939/1‑150 (MQ=255) gTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGgcgc > 2:1331781/1‑150 (MQ=255) | AGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCG > CP009273/4461170‑4461462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |