| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,474,571 | T→A | 5.2% | N400Y (AAT→TAT) | pepA ← | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,474,571 | 0 | T | A | 5.2% | 994.7 / 31.0 | 298 | N400Y (AAT→TAT) | pepA | multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site‑specific recombination factor |
| Reads supporting (aligned to +/- strand): ref base T (164/118); new base A (8/8); total (172/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 303 total aligned reads displayed.
GGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTG > CP009273/4474422‑4474719 | ggTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGAtt < 1:1085670/150‑1 (MQ=255)ggTAATCGCCCCACCAGGACGACCGCCAATGTTCG‑CATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTa < 2:58507/150‑1 (MQ=255) tAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTAt < 1:2454770/150‑1 (MQ=255) aaTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATg > 2:1327482/1‑150 (MQ=255) aaTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATg > 2:2765254/1‑150 (MQ=255) aaTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATg < 1:4057290/150‑1 (MQ=255) aTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATgg > 1:2761774/1‑150 (MQ=255) aTCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGAGTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATgg > 2:3317945/1‑150 (MQ=255) gCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTc < 2:90833/150‑1 (MQ=255) ccaccaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGcc > 1:3336335/1‑150 (MQ=255) ccaccaGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATAATGGTTCGcc > 2:3766689/1‑150 (MQ=255) ggACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGa < 1:746902/150‑1 (MQ=255) gacgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGAc < 1:2405271/150‑1 (MQ=255) acgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGAcc > 1:2417205/1‑150 (MQ=255) cgacCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCa > 2:62232/1‑150 (MQ=255) acCGCCAATGTTCGCCATCTCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt < 2:816822/150‑1 (MQ=255) acCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGt > 1:4364272/1‑150 (MQ=255) cGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTaa > 2:1601200/1‑150 (MQ=255) gCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAat < 2:1800309/150‑1 (MQ=255) gCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAat < 2:1759272/150‑1 (MQ=255) gCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGGTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAat < 2:4013551/150‑1 (MQ=255) ccAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAata < 1:1705680/150‑1 (MQ=255) aTGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatga < 1:315337/150‑1 (MQ=255) aTGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatga > 1:1253901/1‑150 (MQ=255) gTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATatgatg < 1:2217711/150‑1 (MQ=255) cGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGAcc < 1:271551/150‑1 (MQ=255) gCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCAGCAGACCAGTAATATGATGAccc > 2:4064936/1‑150 (MQ=255) ccATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCAAGCGCGGTCACCGGATTGATCAGACGCGGCAAACAGATCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCa > 2:1173469/1‑150 (MQ=255) tatCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgcg > 2:3410740/1‑150 (MQ=255) tatCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAgcg > 2:4375291/1‑150 (MQ=255) tCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGcgcg < 1:3033725/150‑1 (MQ=255) ggCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGAt > 1:229993/1‑150 (MQ=255) aaTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGc > 1:2234736/1‑150 (MQ=255) aTTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCa < 2:3223139/150‑1 (MQ=255) ttGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAg > 1:655587/1‑150 (MQ=255) ttGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAg > 1:3780513/1‑150 (MQ=255) gACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCa > 2:567905/1‑150 (MQ=255) cAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGt > 2:1531572/1‑150 (MQ=255) tgttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGc < 2:359042/150‑1 (MQ=255) ttCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTAACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGt > 2:4096142/1‑150 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCACTCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:2892970/1‑150 (MQ=255) ccTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCACGGGCCAGCGGCTTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCg > 2:2766543/1‑150 (MQ=255) cTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGc > 2:3560680/1‑150 (MQ=255) gATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCa > 1:3029548/1‑150 (MQ=255) aTACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCAc > 2:980850/1‑150 (MQ=255) aTACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCAc < 2:4038725/150‑1 (MQ=255) aTAATCGTCACCCAGCGGAAAGCGCCATGCGCGGACACCGGATAGTTCAGACGCGGAAATCAGTTAATGGGCCATCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCATCGCGATCACGCAGGCAACGGTCAGCGTAGacac > 2:3783625/1‑150 (MQ=255) tACTCGTCACCCCGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCAAGCAGGCACCGGTCTGCGTCGCCACg < 1:1775179/150‑1 (MQ=255) aCTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGt > 1:1464090/1‑150 (MQ=255) aCTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGt > 2:1960476/1‑150 (MQ=255) gTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAAt < 1:257827/150‑1 (MQ=255) cACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCa > 1:2533362/1‑150 (MQ=255) cACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCa > 1:1712797/1‑150 (MQ=255) cccAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCAcc > 1:2037498/1‑150 (MQ=255) aGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCt < 1:752616/150‑1 (MQ=255) aGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCt > 1:4420575/1‑150 (MQ=255) gCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGACAGCGTATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCtt < 2:2401487/150‑1 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc < 1:1802064/150‑1 (MQ=255) ggTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTcc > 2:1317219/1‑150 (MQ=255) gTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCg > 2:1389520/1‑150 (MQ=255) tAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCgg < 2:2300064/150‑1 (MQ=255) cgcCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCa < 1:3743717/150‑1 (MQ=255) gcCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCac > 2:3821600/1‑149 (MQ=255) cATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCaaaa > 2:4364460/1‑150 (MQ=255) aTGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAAc < 1:3422885/150‑1 (MQ=255) aTGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGAGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAAc < 2:2069363/150‑1 (MQ=255) aCCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTa < 2:1121078/150‑1 (MQ=255) cGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAg > 1:331034/1‑150 (MQ=255) gTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAaca > 2:1888586/1‑150 (MQ=255) ttCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAacac < 1:3296731/150‑1 (MQ=255) ttCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAacac < 1:418700/150‑1 (MQ=255) ttCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAacac < 2:3900592/150‑1 (MQ=255) ttCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAACGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAacac > 2:318837/1‑150 (MQ=255) tCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACg > 1:3392702/1‑150 (MQ=255) aGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTc > 2:2792259/1‑150 (MQ=255) aCGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGc < 2:1670423/150‑1 (MQ=255) cgcgGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGca > 1:974552/1‑150 (MQ=255) cgGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGcaca < 1:2172336/150‑1 (MQ=255) aaTCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTAc > 1:1414853/1‑150 (MQ=255) aaTCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTAc < 2:295114/150‑1 (MQ=255) tCAGCTCAGGGGCCAGCGGATAATGGTACGCCATCAGACCAGTACTAGCAGGACCCAGCGCGATCACCCAGGCACCGGTCAGCGTCGCCACGACAATCACCGCTACCGGCTCAAAACGCACAACCTCAGTTAACACGTCGCACAGTACCa < 2:248094/150‑1 (MQ=255) cAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAg < 2:498304/150‑1 (MQ=255) gTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggc < 2:701736/150‑1 (MQ=255) gTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggc > 1:2684740/1‑150 (MQ=255) gTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggc > 1:809673/1‑150 (MQ=255) gTTCATGGGCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggc > 2:832654/1‑150 (MQ=255) gTTCATGGGCCAGCGGAGTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACCGTACCAggc > 2:2569611/1‑150 (MQ=255) tCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggcgg > 2:2859133/1‑150 (MQ=255) cATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAggcggc > 1:3978130/1‑150 (MQ=255) gggCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCtt < 2:2160773/150‑1 (MQ=255) ggCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTc < 1:2321836/150‑1 (MQ=255) gCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCa < 1:62190/150‑1 (MQ=255) gCCAGCGGATAATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCa < 1:2882880/150‑1 (MQ=255) aGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCg > 2:599562/1‑150 (MQ=255) cGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTc < 1:3560680/150‑1 (MQ=255) cGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTc < 1:3246178/150‑1 (MQ=255) ggATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCg > 1:3896855/1‑150 (MQ=255) aTTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGgt < 1:1601200/150‑1 (MQ=255) aTTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGgt < 1:2086285/150‑1 (MQ=255) aTTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGgt > 2:2286865/1‑150 (MQ=255) | GGTAATCGCCCCACCAGGACGACCGCCAATGTTCGCCATATCGGCAAAATTGGACTCCAGTTGTTCCTGATACTCGTCACCCAGCGGTAAGCGCCATGCGCGGTCACCGGATTGTTCAGACGCGGCAATCAGTTCATGGGCCAGCGGATTATGGTTCGCCATCAGACCAGTAATATGATGACCCAGCGCGATCACGCAGGCACCGGTCAGCGTCGCCACGTCAATCACCGCTTCCGGCTCAAAACGCTCAACGTAAGTTAACACGTCGCACAGTACCAGGCGGCCTTCAGCGTCGGTG > CP009273/4474422‑4474719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |