| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,565,742 | C→A | 8.8% | pseudogene (2007/2937 nt) | yjiV → | pseudogene; conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,565,742 | 0 | C | A | 8.8% | 868.6 / 39.4 | 239 | pseudogene (2007/2937 nt) | yjiV | pseudogene; conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (99/119); new base A (8/13); total (107/132) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
Only 100 of 263 total aligned reads displayed.
AAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCG > CP009273/4565593‑4565891 | aaaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtc < 2:3570304/150‑1 (MQ=255)aaaGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtc < 2:2128183/150‑1 (MQ=255) aGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgt < 1:1200638/150‑1 (MQ=255) gTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgtg < 1:1137223/150‑1 (MQ=255) cacaATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa > 2:3427728/1‑150 (MQ=255) acaAGGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGaa < 2:3384696/150‑1 (MQ=255) aaTGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAgg > 1:2373161/1‑150 (MQ=255) aaTGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAgg > 1:937274/1‑150 (MQ=255) cGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGAGGCt > 2:4029431/1‑150 (MQ=255) ggAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCtt < 1:1757691/150‑1 (MQ=255) aaaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTct < 1:1817795/150‑1 (MQ=255) aaaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTct < 1:2663143/150‑1 (MQ=255) tCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctact < 2:3375024/150‑1 (MQ=255) cTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctacta > 1:415907/1‑150 (MQ=255) ggATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGc > 2:539814/1‑150 (MQ=255) aTCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAAGGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg > 2:2905279/1‑150 (MQ=255) aTCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg < 2:4330299/150‑1 (MQ=255) aTCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCg < 2:40739/150‑1 (MQ=255) tCACAGGAAGACTACGCGGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCAc > 1:2777537/1‑150 (MQ=255) tCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCAc > 1:2509479/1‑150 (MQ=255) acaGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCActc > 2:607248/1‑150 (MQ=255) caGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATAAACGATCGAGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCActct > 2:360386/1‑150 (MQ=255) gAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGcc > 2:1166709/1‑150 (MQ=255) aaGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc > 1:1415828/1‑150 (MQ=255) aCTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCcagc > 1:1966552/1‑150 (MQ=255) cTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCcagca < 2:378131/150‑1 (MQ=255) aCGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgt < 1:2438568/150‑1 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 2:2967194/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 1:2039090/1‑150 (MQ=255) agagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgtc > 1:2038869/1‑150 (MQ=255) gggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGa < 2:3167813/150‑1 (MQ=255) ggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGaa < 1:4524510/150‑1 (MQ=255) ggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGaa < 1:3510990/150‑1 (MQ=255) tCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTGGCAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACg < 1:3689492/150‑1 (MQ=255) tGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTc > 2:4172696/1‑150 (MQ=255) ggCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCt < 1:1579360/150‑1 (MQ=255) ggCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCt > 2:456830/1‑150 (MQ=255) aaaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCa < 1:2107852/150‑1 (MQ=255) aaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaa < 2:3019900/150‑1 (MQ=255) aaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaa < 1:104960/150‑1 (MQ=255) aaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaa < 1:2788541/150‑1 (MQ=255) aaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaa < 2:1022921/150‑1 (MQ=255) cACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCt < 1:269628/150‑1 (MQ=255) cgcgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTAt < 2:1463396/150‑1 (MQ=255) cgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGa < 1:2090678/150‑1 (MQ=255) cTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGaaaa < 1:657802/150‑1 (MQ=255) ggTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGAt < 1:2838541/150‑1 (MQ=255) ggTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGAt < 2:4446574/150‑1 (MQ=255) gTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATg > 1:877510/1‑150 (MQ=255) tCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGt > 2:2034318/1‑150 (MQ=255) tCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGt < 1:2452204/150‑1 (MQ=255) cAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGtt < 1:4362666/150‑1 (MQ=255) cAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGtt > 2:956626/1‑150 (MQ=255) aGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTc > 2:1603102/1‑150 (MQ=255) aGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTc > 2:3284878/1‑150 (MQ=255) aGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTc > 2:77537/1‑150 (MQ=255) gCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCa < 2:4111509/150‑1 (MQ=255) tGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGaa > 1:3398025/1‑150 (MQ=255) gATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAAt < 1:3808516/150‑1 (MQ=255) gATCCGCTGATCGCACAATGGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAAt < 1:3808621/150‑1 (MQ=255) aTCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATg < 1:618099/150‑1 (MQ=255) aTCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATg < 2:2334253/150‑1 (MQ=255) aTCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATg < 1:2899883/150‑1 (MQ=255) cGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGc < 2:2818095/150‑1 (MQ=255) gCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCa < 2:2948999/150‑1 (MQ=255) gCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCa < 2:668640/150‑1 (MQ=255) cTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCaa > 1:1314995/1‑150 (MQ=255) cTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCaa > 1:1314972/1‑150 (MQ=255) cTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCaa > 1:3852503/1‑150 (MQ=255) gATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 1:3075018/150‑1 (MQ=255) gATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 1:3075065/150‑1 (MQ=255) gATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt < 2:3999775/150‑1 (MQ=255) aTCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTa > 2:2343504/1‑150 (MQ=255) aTCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTa > 2:2343461/1‑150 (MQ=255) cGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTaaa < 1:4342061/150‑1 (MQ=255) aTTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtct < 1:1158485/150‑1 (MQ=255) tGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCa > 1:2158921/1‑150 (MQ=255) tGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTAACGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCa > 1:842533/1‑150 (MQ=255) gCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCaa < 1:4247518/150‑1 (MQ=255) cGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGtt < 2:3114954/150‑1 (MQ=255) cGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGtt < 2:2749636/150‑1 (MQ=255) cGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGtt < 2:2599511/150‑1 (MQ=255) aaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccac < 2:1878136/150‑1 (MQ=255) aaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccac > 2:1120460/1‑150 (MQ=255) aCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccacca < 1:1057205/150‑1 (MQ=255) aCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccacca < 2:44017/150‑1 (MQ=255) cTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCAt < 2:3162184/150‑1 (MQ=255) ggACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATgg < 1:4341895/150‑1 (MQ=255) acagacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGaa > 1:3763561/1‑150 (MQ=255) acagacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGaa < 1:3427728/150‑1 (MQ=255) cagacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGaaa > 2:1999142/1‑150 (MQ=255) caTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggg < 2:4326686/150‑1 (MQ=255) tAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGt > 1:20300/1‑150 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGtt > 1:3429493/1‑150 (MQ=255) aCGATCGGGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTg < 2:1469465/150‑1 (MQ=255) cGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGa < 2:703889/150‑1 (MQ=255) gATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGAt > 1:2416358/1‑150 (MQ=255) gtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCg > 2:2165215/1‑150 (MQ=255) tgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGa < 1:4032741/150‑1 (MQ=255) tcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATc < 1:3988559/150‑1 (MQ=255) | AAAGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGATCG > CP009273/4565593‑4565891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |