| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,569,668 | C→A | 6.3% | noncoding (17/77 nt) | symR → | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,569,668 | 0 | C | A | 6.3% | 894.2 / 24.9 | 237 | noncoding (17/77 nt) | symR | sRNA antisense regulator destabilizing divergent and overlapping symE mRNA |
| Reads supporting (aligned to +/- strand): ref base C (102/120); new base A (10/5); total (112/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
Only 100 of 245 total aligned reads displayed.
CCACTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATAT > CP009273/4569520‑4569817 | cACTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATtctc < 2:1518439/150‑1 (MQ=255) cACTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATtctc > 1:2176189/1‑150 (MQ=255) aCTGACCTTTCTGGGTGAGGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTTCAATAGAATGCGTGTCAGTCATAACTGCTATTCTcc < 1:4426625/150‑1 (MQ=255) aCTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTcc > 2:4542853/1‑150 (MQ=255) aCTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTcc > 1:2975898/1‑150 (MQ=255) gACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAgg < 1:812845/150‑1 (MQ=255) ttCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAg < 2:2740264/150‑1 (MQ=255) cAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAgtg < 2:1353875/150‑1 (MQ=255) cAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAgtg > 1:1772590/1‑150 (MQ=255) ggCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAgtgattgtgatt < 1:560168/150‑1 (MQ=255) ggCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAgtgattgtgatt < 1:1020480/150‑1 (MQ=255) ggAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCg < 2:1076839/150‑1 (MQ=255) ggAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCg > 1:4002101/1‑150 (MQ=255) ggAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCg > 2:2686987/1‑150 (MQ=255) gAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGa < 1:2154902/150‑1 (MQ=255) aTACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATg > 2:2758725/1‑150 (MQ=255) aTACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATg > 2:2472073/1‑150 (MQ=255) cGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCgg > 2:1394040/1‑150 (MQ=255) cGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCgg > 2:1393923/1‑150 (MQ=255) ggCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCggg > 1:2093901/1‑150 (MQ=255) ggCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCggg > 1:448864/1‑150 (MQ=255) ggCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCggg > 1:1560495/1‑150 (MQ=255) ggCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCggg > 1:3796395/1‑150 (MQ=255) ggCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCggg > 1:1560323/1‑150 (MQ=255) gCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGgt < 2:1311705/150‑1 (MQ=255) cTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGgtg > 2:4070772/1‑150 (MQ=255) cTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGgtg > 2:4069670/1‑150 (MQ=255) cTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACCGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGgtg > 1:3701089/1‑150 (MQ=255) tAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGgtgtgt < 2:1093333/150‑1 (MQ=255) tCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTgg < 1:2422349/150‑1 (MQ=255) ccGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGgc < 1:2522309/150‑1 (MQ=255) cGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATcc < 2:2611303/150‑1 (MQ=255) cGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATcc < 1:2057386/150‑1 (MQ=255) cGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATcc < 1:1446495/150‑1 (MQ=255) gACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCg > 1:1319287/1‑150 (MQ=255) aCTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGc < 2:209637/150‑1 (MQ=255) aCTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGc < 2:855966/150‑1 (MQ=255) cTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCa < 1:3216538/150‑1 (MQ=255) gCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACcg < 2:239081/150‑1 (MQ=255) aTAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACcgcg > 1:2236001/1‑150 (MQ=255) aTAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACcgcg > 1:2234398/1‑150 (MQ=255) cGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTaaa < 2:1790455/150‑1 (MQ=255) aCGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATa > 1:3543930/1‑150 (MQ=255) aCGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATa > 2:4493638/1‑150 (MQ=255) cGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTATCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATAc > 1:1991646/1‑150 (MQ=255) cGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTATCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATAc > 1:1991628/1‑150 (MQ=255) gTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCt < 1:926554/150‑1 (MQ=255) aTGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGtata > 1:780881/1‑150 (MQ=255) gACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGtatata > 2:770829/1‑150 (MQ=255) aCGGTTATTTGCTGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTatatat < 2:2214158/150‑1 (MQ=255) gTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATatcat < 2:23197/150‑1 (MQ=255) ttATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATatcatc < 2:2778976/150‑1 (MQ=255) ttATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATatcatc > 1:4185831/1‑150 (MQ=255) ttATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATatcatc < 2:2452415/150‑1 (MQ=255) aTTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAg < 2:4223744/150‑1 (MQ=255) tGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTaa < 1:4253703/150‑1 (MQ=255) tGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTaa > 1:2106347/1‑150 (MQ=255) ccGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAat < 1:2330929/150‑1 (MQ=255) cGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGACTAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAata > 2:2532027/1‑150 (MQ=255) ggggAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATTGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCAAATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAatat < 2:222806/150‑1 (MQ=255) ggAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATgg < 1:107006/150‑1 (MQ=255) ggAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATgg < 1:107336/150‑1 (MQ=255) ggAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATgg < 2:4096588/150‑1 (MQ=255) agaCTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATgggg < 2:2444656/150‑1 (MQ=255) gaCTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGa > 2:2187641/1‑150 (MQ=255) gaCTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGa < 1:1928399/150‑1 (MQ=255) cTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGaaa < 2:3287257/150‑1 (MQ=255) cTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGaaa < 1:355165/150‑1 (MQ=255) cTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTc > 1:3458354/1‑150 (MQ=255) tGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTcc > 2:1627215/1‑150 (MQ=255) gCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCa > 1:2195212/1‑150 (MQ=255) gCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCa > 1:235518/1‑150 (MQ=255) tCGAACGGTTGTGCAATAGACTGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCt < 1:3107253/150‑1 (MQ=255) tCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCt < 2:2207424/150‑1 (MQ=255) tCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCt < 2:2976816/150‑1 (MQ=255) aaCGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTaaa < 2:3525619/150‑1 (MQ=255) cGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTaaaaa < 1:3303478/150‑1 (MQ=255) gTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATa > 2:35013/1‑150 (MQ=255) tgtgCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGa < 2:2741915/150‑1 (MQ=255) gCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATa < 2:437947/150‑1 (MQ=255) aaTAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATaaa > 1:2574693/1‑150 (MQ=255) aTAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATaaaa > 1:2006408/1‑150 (MQ=255) aGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATg > 2:3793741/1‑150 (MQ=255) aGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATg > 2:389709/1‑150 (MQ=255) aGAATGCGTGTCAGTCATAACTGCTATTATCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATg < 2:1942851/150‑1 (MQ=255) cGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAt < 1:4542853/150‑1 (MQ=255) gtgtCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAtt < 1:2582700/150‑1 (MQ=255) gtgtCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAtt > 2:1176683/1‑150 (MQ=255) gtgtCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAtt < 1:87822/150‑1 (MQ=255) tgtCAGTCATAACTGCTATTATCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAttt > 2:3614856/1‑150 (MQ=255) tgtCAGTCATAACTGCTATTATCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAAttt > 2:3614726/1‑150 (MQ=255) gtcagtcaTAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTc < 1:4190121/150‑1 (MQ=255) aTAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATg > 1:2903916/1‑150 (MQ=255) tAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGa > 2:488791/1‑150 (MQ=255) aaCTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGACTGAt > 2:2566908/1‑150 (MQ=255) aCTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGAtt < 1:2531601/150‑1 (MQ=255) gCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTaa < 1:389709/150‑1 (MQ=255) cTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTaaa < 2:3761832/150‑1 (MQ=255) aTTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAata > 2:3027053/1‑150 (MQ=255) ctcCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAatatat < 1:3276901/150‑1 (MQ=255) | CCACTGACCTTTCAGGGTGATGGCGGGAATACGGCTGTAATCCGGGTAGCGACTCGCATAACCGACGGTGACATGACGGTTATTTGCCGGGGAGACTTCTGCTTCGAACGGTTGTGCAATAGAATGCGTGTCAGTCATAACTGCTATTCTCCAGGAATAGTGATTGTGATTAGCGATGCGGGTGTGTTGGCGCACATCCGCACCGCGCTAAATACCTGTATATATCATCAGTAAATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATAT > CP009273/4569520‑4569817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |