| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,577,836 | C→A | 9.8% | D283Y (GAC→TAC) | yjiA ← | GTP‑binding protein, putative GTPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,577,836 | 0 | C | A | 9.8% | 990.2 / 53.8 | 275 | D283Y (GAC→TAC) | yjiA | GTP‑binding protein, putative GTPase |
| Reads supporting (aligned to +/- strand): ref base C (118/130); new base A (18/9); total (136/139) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.94e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
GGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTACCGGGT > CP009273/4577688‑4577985 | gCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCgg > 2:3282887/1‑150 (MQ=255) gCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTa < 1:4377717/150‑1 (MQ=255) gCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAACCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTagag < 1:1751490/150‑1 (MQ=255) cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAgg < 1:1224282/150‑1 (MQ=255) cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAgg > 2:4257873/1‑150 (MQ=255) cTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAgg > 1:2332380/1‑150 (MQ=255) ccTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTg > 1:3373975/1‑150 (MQ=255) cTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTgg > 2:681992/1‑150 (MQ=255) ttATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGa > 2:3800397/1‑150 (MQ=255) aTCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACg > 2:2739529/1‑150 (MQ=255) cGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGccc < 2:4532210/150‑1 (MQ=255) cGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGccc < 2:3978264/150‑1 (MQ=255) ggCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCAACGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCt > 2:539845/1‑150 (MQ=255) gCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTg < 2:3085990/150‑1 (MQ=255) gCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTg > 2:2569860/1‑150 (MQ=255) cccATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTgg < 2:568538/150‑1 (MQ=255) ccATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGa > 1:4023497/1‑150 (MQ=255) aTAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAAc < 1:1428283/150‑1 (MQ=255) aTAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAAc < 2:1935707/150‑1 (MQ=255) aTAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAAc > 2:2697344/1‑150 (MQ=255) ccccTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAAcagca < 1:2735436/150‑1 (MQ=255) ccccTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGACcagca > 2:904710/1‑150 (MQ=255) cTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATCAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGc < 2:2070686/150‑1 (MQ=255) ttACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCg > 1:117769/1‑150 (MQ=255) tACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCgg > 1:1349609/1‑150 (MQ=255) aCTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGt < 2:3301440/150‑1 (MQ=255) aCTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGt < 2:3301503/150‑1 (MQ=255) cgtCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGtt < 1:3744606/148‑1 (MQ=255) cTTCCTCAACCCCGCAACCGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGtt < 1:2702547/150‑1 (MQ=255) cTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGtt > 1:4222138/1‑150 (MQ=255) cTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGtt < 1:1666646/150‑1 (MQ=255) ttCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTa > 1:862301/1‑150 (MQ=255) ttCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTa < 1:2497961/150‑1 (MQ=255) tCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAg > 1:2490312/1‑150 (MQ=255) tCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAg < 2:2642806/150‑1 (MQ=255) ccTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAgg > 2:479235/1‑150 (MQ=255) cTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGt < 2:1677962/150‑1 (MQ=255) tCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGtt < 2:2552694/150‑1 (MQ=255) ccccGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGcc > 1:2030597/1‑150 (MQ=255) cccGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCg < 1:3812832/150‑1 (MQ=255) cccGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCg > 1:1703071/1‑150 (MQ=255) ccGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGt > 2:120002/1‑150 (MQ=255) cGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTc < 2:1053406/150‑1 (MQ=255) aaaCGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAAt < 1:567471/150‑1 (MQ=255) cGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCca > 1:2229216/1‑150 (MQ=255) gCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCcac < 1:309472/150‑1 (MQ=255) gCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCcac > 1:2530605/1‑150 (MQ=255) gCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCcac > 1:2957606/1‑150 (MQ=255) cAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCcaca < 1:494981/150‑1 (MQ=255) aGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAg > 2:1742518/1‑150 (MQ=255) gCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGc < 1:3013073/150‑1 (MQ=255) cGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATc < 1:3610710/150‑1 (MQ=255) gAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATcc > 2:3474713/1‑150 (MQ=255) gAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATcc > 2:2023535/1‑150 (MQ=255) gCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCa < 1:999592/150‑1 (MQ=255) aGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGt < 1:396062/150‑1 (MQ=255) gCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGtt < 1:1926118/150‑1 (MQ=255) gCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGtt > 2:1023722/1‑150 (MQ=255) tGGATCCCGATAAGCACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTa > 2:50421/1‑150 (MQ=255) tGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTa > 2:2501128/1‑150 (MQ=255) tGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTa > 2:2501284/1‑150 (MQ=255) gATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGGCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATc > 1:2939842/1‑150 (MQ=255) aTCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGAAGCAGTTTATca > 1:4080687/1‑149 (MQ=255) ccGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATccgcc < 2:2673148/150‑1 (MQ=255) cGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATccgccg < 2:3477047/150‑1 (MQ=255) cGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATccgccg < 2:1862597/150‑1 (MQ=255) aTAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGAc > 1:2908557/1‑150 (MQ=255) aTAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGAc > 1:2908518/1‑150 (MQ=255) aTAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGAc > 2:4512531/1‑150 (MQ=255) aTAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGAc > 2:4100928/1‑150 (MQ=255) aaCACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTcc > 1:68128/1‑150 (MQ=255) acacCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCca > 1:2348051/1‑150 (MQ=255) cacCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCcag > 1:1041887/1‑150 (MQ=255) tCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCcagcagca < 2:2834262/150‑1 (MQ=255) tGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGt > 1:4541006/1‑150 (MQ=255) gCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGtt < 2:2332380/150‑1 (MQ=255) tATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGtttt < 2:1062994/150‑1 (MQ=255) aTGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTc > 2:1916126/1‑150 (MQ=255) gCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCa > 1:3330070/1‑150 (MQ=255) gCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCa > 2:4032582/1‑150 (MQ=255) cGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCAt < 2:2298878/150‑1 (MQ=255) cGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCAt < 2:3735674/150‑1 (MQ=255) cGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCAt > 1:2345753/1‑150 (MQ=255) ggTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATc < 2:6360/150‑1 (MQ=255) gTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCa > 2:1496499/1‑150 (MQ=255) tCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCgg < 2:4524408/150‑1 (MQ=255) cATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCggg < 2:215798/150‑1 (MQ=255) aTCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGa < 2:1831054/150‑1 (MQ=255) ccccACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACt > 2:2174939/1‑150 (MQ=255) ccccACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACt < 1:3556360/150‑1 (MQ=255) ccACGGCCTGTCCCAGTAGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTc < 1:1436308/150‑1 (MQ=255) cACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCg > 2:1628351/1‑150 (MQ=255) cGGCCTGTCCCAGTCGGCGCTGTAGAGGCGGTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACACCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCt < 2:2913025/150‑1 (MQ=255) ggCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTg > 1:2571199/1‑150 (MQ=255) tGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGatat > 1:2638560/1‑150 (MQ=255) ccAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTAc < 1:1794329/150‑1 (MQ=255) cAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTAcc < 2:2965611/150‑1 (MQ=255) aGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTACCg < 2:28871/150‑1 (MQ=255) aGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTACCg < 2:1333641/150‑1 (MQ=255) tCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTACCggg < 1:286183/150‑1 (MQ=255) | GGCCGGATGCGGCTGCGCCTTATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATCGCCCCACGGCCTGTCCCAGTCGGCGCTGTAGAGGCGCTGGACGCCCTGGAACAGCAGGCGGTTAGGTTCGCCGTCAATCCACAGCATCCCTTTGTAACGTAGCAGTTTATCCGCCGACTCCAGCAGCAGGTTTTCCATCACGCGGGAAACTTCGCTGATATCTACCGGGT > CP009273/4577688‑4577985 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |