Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 651,654 A→G 9.0% intergenic (‑230/‑359) dcuC ← / → pagP anaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273651,6540AG 9.0% 972.0 / 64.3 310intergenic (‑230/‑359)dcuC/pagPanaerobic C4‑dicarboxylate transport/phospholipid:lipid A palmitoyltransferase
Reads supporting (aligned to +/- strand):  ref base A (119/163);  new base G (20/8);  total (139/171)
Fisher's exact test for biased strand distribution p-value = 4.55e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

Only 100 of 311 total aligned reads displayed.

ATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCAA  >  CP009273/651507‑651803
                                                                                                                                                   |                                                                                                                                                     
 tGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAAtt                                                                                                                                                    <  1:964459/150‑1 (MQ=255)
 tGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAAtt                                                                                                                                                    <  1:3390539/150‑1 (MQ=255)
     tGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCaa                                                                                                                                                >  2:2093577/1‑150 (MQ=255)
       cTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATg                                                                                                                                              <  2:96036/150‑1 (MQ=255)
       cTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATg                                                                                                                                              <  1:3675188/150‑1 (MQ=255)
       cTGATTAAAATCAAGAAAAACTGACATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATg                                                                                                                                              <  2:2814812/150‑1 (MQ=255)
        tGATTAAAATCAATAAAAACTTCCATTAAGACATTGAAGTTTCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATgg                                                                                                                                             <  2:1039979/150‑1 (MQ=255)
         gATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGgt                                                                                                                                            >  2:1842746/1‑150 (MQ=255)
          aTTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGgtg                                                                                                                                           >  2:2264049/1‑150 (MQ=255)
          aTTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGgtg                                                                                                                                           <  1:4129545/150‑1 (MQ=255)
           ttAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGgtgt                                                                                                                                          <  1:776145/150‑1 (MQ=255)
                      aaaaaCTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCt                                                                                                                               >  2:2171962/1‑150 (MQ=255)
                        aaaCTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCtgt                                                                                                                             <  2:1350997/150‑1 (MQ=255)
                         aaCTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCtgtg                                                                                                                            <  1:1085436/150‑1 (MQ=255)
                               cATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCa                                                                                                                      <  1:3109053/150‑1 (MQ=255)
                                aTTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCAAATTAAGAGTTTGGCAATTATCACATAATAATGTTTGCAAATTGATTGTGGATTGATGAAAATTTTTTAATTGCAATGGAGTTATATGCGGCTGTGCTCTCaa                                                                                                                     >  2:3128961/1‑150 (MQ=255)
                                   aaGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaaa                                                                                                                  >  2:560025/1‑150 (MQ=255)
                                   aaGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaaa                                                                                                                  <  1:1431105/150‑1 (MQ=255)
                                   aaGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCaaaaa                                                                                                                  >  2:767013/1‑150 (MQ=255)
                                   aaGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATAGCAATGGTGTTATCTGCGGCTGTGCTCTCaaaaa                                                                                                                  >  2:2955049/1‑150 (MQ=255)
                                     gACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAaat                                                                                                                >  1:3611557/1‑150 (MQ=255)
                                       cATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAaataa                                                                                                              >  1:4373295/1‑150 (MQ=255)
                                        aTTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAaataat                                                                                                             >  1:212558/1‑150 (MQ=255)
                                          tGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCt                                                                                                           >  1:4228079/1‑150 (MQ=255)
                                          tGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCt                                                                                                           >  1:1010530/1‑150 (MQ=255)
                                           gAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTa                                                                                                          <  2:1868033/150‑1 (MQ=255)
                                           gAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTa                                                                                                          <  2:3846917/150‑1 (MQ=255)
                                              gTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAata                                                                                                       >  2:4522355/1‑150 (MQ=255)
                                               ttGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAatat                                                                                                      <  1:710270/150‑1 (MQ=255)
                                               ttGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAatat                                                                                                      <  1:710210/150‑1 (MQ=255)
                                                 gCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGa                                                                                                    <  2:1919448/150‑1 (MQ=255)
                                                  cTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAg                                                                                                   <  2:709945/150‑1 (MQ=255)
                                                  cTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAg                                                                                                   <  1:1102164/150‑1 (MQ=255)
                                                   tGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGc                                                                                                  <  1:1607550/150‑1 (MQ=255)
                                                    gTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCa                                                                                                 >  1:4242706/1‑150 (MQ=255)
                                                    gTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCa                                                                                                 >  1:1250708/1‑150 (MQ=255)
                                                     tttttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCAt                                                                                                >  2:1145350/1‑150 (MQ=255)
                                                        ttATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAgg                                                                                             <  1:2457387/150‑1 (MQ=255)
                                                           taCATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTg                                                                                          >  1:2305092/1‑150 (MQ=255)
                                                           taCATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTg                                                                                          <  2:4078334/150‑1 (MQ=255)
                                                               tAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGa                                                                                      >  2:3911929/1‑150 (MQ=255)
                                                                 gATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGata                                                                                    <  1:2828811/150‑1 (MQ=255)
                                                                 gATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGata                                                                                    >  2:140947/1‑150 (MQ=255)
                                                                  aTAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatat                                                                                   <  1:2899639/150‑1 (MQ=255)
                                                                    aaCAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatatat                                                                                 <  2:130199/150‑1 (MQ=255)
                                                                    aaCAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatatat                                                                                 >  2:4234506/1‑150 (MQ=255)
                                                                    aaCAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatatat                                                                                 <  2:2193153/150‑1 (MQ=255)
                                                                     aCAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGatatata                                                                                >  2:121837/1‑150 (MQ=255)
                                                                       aaaaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatatt                                                                              <  1:3527667/150‑1 (MQ=255)
                                                                         aaCGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATAtatattat                                                                            >  1:3489451/1‑150 (MQ=255)
                                                                            gCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATtatata                                                                         <  1:2712560/150‑1 (MQ=255)
                                                                              atatTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACt                                                                       <  2:3328029/150‑1 (MQ=255)
                                                                                  ttAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGt                                                                   <  1:3868558/150‑1 (MQ=255)
                                                                                   tAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGtt                                                                  >  1:711386/1‑150 (MQ=255)
                                                                                        gTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgat                                                             <  1:525716/150‑1 (MQ=255)
                                                                                         ttGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgatg                                                            <  1:1321108/150‑1 (MQ=255)
                                                                                          tGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgatga                                                           >  1:1495220/1‑150 (MQ=255)
                                                                                          tGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAgatga                                                           >  1:3760158/1‑150 (MQ=255)
                                                                                            gCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAtt                                                         <  1:1529844/150‑1 (MQ=255)
                                                                                             cAATTATCTCATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttg                                                        <  2:4144695/150‑1 (MQ=255)
                                                                                             cAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttg                                                        <  2:763004/150‑1 (MQ=255)
                                                                                              aaTTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGAttgt                                                       >  1:3060685/1‑150 (MQ=255)
                                                                                                 tATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATtgttgt                                                    >  2:3597879/1‑150 (MQ=255)
                                                                                                    cacaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtc                                                 <  2:2326894/150‑1 (MQ=255)
                                                                                                     acaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtct                                                <  2:864505/150‑1 (MQ=255)
                                                                                                     acaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtct                                                <  2:865036/150‑1 (MQ=255)
                                                                                                     acaTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtct                                                <  2:1203654/150‑1 (MQ=255)
                                                                                                      caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTTACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               <  1:2416690/150‑1 (MQ=255)
                                                                                                      caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               <  2:486668/150‑1 (MQ=255)
                                                                                                      caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               <  1:3296559/150‑1 (MQ=255)
                                                                                                      caTAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTAtctc                                               <  2:3092309/150‑1 (MQ=255)
                                                                                                          ataatGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTa                                           <  1:1972662/150‑1 (MQ=255)
                                                                                                           taatGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaa                                          <  2:399097/150‑1 (MQ=255)
                                                                                                             atGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaaa                                        >  1:2256319/1‑150 (MQ=255)
                                                                                                              tgtgtgCAAATTGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTaaaaa                                       <  2:595294/150‑1 (MQ=255)
                                                                                                                 gtgCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaata                                    <  1:3009827/150‑1 (MQ=255)
                                                                                                                   gCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaa                                  >  1:3090113/1‑150 (MQ=255)
                                                                                                                   gCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAaaaataaa                                  >  2:3726396/1‑150 (MQ=255)
                                                                                                                      aaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAaaataaaata                               <  2:4362112/150‑1 (MQ=255)
                                                                                                                      aaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAaaataaaata                               <  1:2545566/150‑1 (MQ=255)
                                                                                                                      aaTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAaaataaaata                               <  1:2581898/150‑1 (MQ=255)
                                                                                                                       aTTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAaataaaataa                              >  1:922121/1‑150 (MQ=255)
                                                                                                                         tGATGGTGGATTGATGCAAATTTGTTGATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAAtt                            >  2:3236114/1‑150 (MQ=255)
                                                                                                                              gtggATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTcc                       <  1:2295023/150‑1 (MQ=255)
                                                                                                                               tggATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACTATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCt                      <  2:3451455/150‑1 (MQ=255)
                                                                                                                                 gATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTg                    <  1:2199276/150‑1 (MQ=255)
                                                                                                                                     gATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTg                <  1:3998087/150‑1 (MQ=255)
                                                                                                                                      aTGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGc               >  2:3516728/1‑150 (MQ=255)
                                                                                                                                      aTGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGc               <  2:1478044/150‑1 (MQ=255)
                                                                                                                                      aTGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGc               <  2:1478050/150‑1 (MQ=255)
                                                                                                                                       cgCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCa              >  1:2510852/2‑150 (MQ=255)
                                                                                                                                        gCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAt             <  2:1637392/150‑1 (MQ=255)
                                                                                                                                        gCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGAGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGTTTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAt             <  2:2070086/150‑1 (MQ=255)
                                                                                                                                          aaaTTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAttt           <  2:2458568/150‑1 (MQ=255)
                                                                                                                                           aaTTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCAtttt          >  1:652467/1‑150 (MQ=255)
                                                                                                                                               tGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGtca      >  1:4529391/1‑150 (MQ=255)
                                                                                                                                                 ttAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATATTCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGtcatc    >  1:4462521/1‑150 (MQ=255)
                                                                                                                                                  tAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGtcatca   <  1:766563/150‑1 (MQ=255)
                                                                                                                                                  tAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGtcatca   <  1:1152128/150‑1 (MQ=255)
                                                                                                                                                   aaTTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCaa  >  1:4324748/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
ATGAATGCTGATTAAAATCAAGAAAAACTGCCATTAAGACATTGAAGTTGCTGTTTTTATACATAGATAACAAAACGCATATTTAGCGGTTGGCAATTATCACATAATAATGTGTGCAAATTGATGGTGGATTGATGCAAATTTGTTAATTGCAATGGTGTTAGCTGCGGCTGTGCGCTCAAAAAATAATCTAATATGAGCATAGGTTGACGATATATATTATATACTTCGTTAAGATGATTGTTGTATCTCGTTAAAAAATAAAATAATTTTTCCTTGATTGCATTTTGTCATCAA  >  CP009273/651507‑651803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: