| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,560,523 | C→A | 8.8% | R292L (CGC→CTC) | dosC ← | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,560,523 | 0 | C | A | 8.8% | 960.6 / 41.5 | 264 | R292L (CGC→CTC) | dosC | diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator |
| Reads supporting (aligned to +/- strand): ref base C (111/129); new base A (12/12); total (123/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.31e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
CGTTGATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAATCCTGA > CP009273/1560374‑1560672 | cGTTGATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGgc < 2:2634355/150‑1 (MQ=255) gTTGATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGgcg < 1:3596340/150‑1 (MQ=255) gATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGa > 2:1719172/1‑150 (MQ=255) gATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGa > 2:2009894/1‑150 (MQ=255) aTCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGAt < 2:2225188/150‑1 (MQ=255) tctcTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATa < 1:4151558/150‑1 (MQ=255) tttGAATTTATCAACGTCAATACTCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATActtc < 2:3716293/150‑1 (MQ=255) tttGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATActtc < 1:2493133/150‑1 (MQ=255) tttGAATTTATCAACGTCAAAAATCAGCACTGACATCGGTGTACCGTTCCGGTTGGCATGGGCAATATCGCGTTAGAAGAAAGTCGGAAGGAAACGGCGGTTAAGTAATATCGTCAGTACATCCATACAGACTTCGAGGCGCGATActtc > 1:4470705/1‑150 (MQ=255) ttGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATActtct < 1:3260594/150‑1 (MQ=255) tGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATActtctt < 1:1902672/150‑1 (MQ=255) aTTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCaa > 2:3995541/1‑150 (MQ=255) aTTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCaa > 1:4199152/1‑150 (MQ=255) tCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAAt > 2:739771/1‑150 (MQ=255) tCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAAt < 1:4133729/150‑1 (MQ=255) aaCGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTc < 1:4378435/150‑1 (MQ=255) cGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCAc > 1:1464924/1‑150 (MQ=255) cGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCAc > 1:409666/1‑150 (MQ=255) gTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACg > 2:4152896/1‑150 (MQ=255) taatCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACgcagca > 2:3477326/1‑150 (MQ=255) catCAGCACTGACCGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCaa < 2:2386601/149‑1 (MQ=255) aatCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCaa < 2:2134392/150‑1 (MQ=255) tCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAgg < 2:587215/150‑1 (MQ=255) cAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGt > 1:1712796/1‑150 (MQ=255) aGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGATAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGta < 2:4384001/150‑1 (MQ=255) gCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaa < 2:4446028/150‑1 (MQ=255) cACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaat > 2:14953/1‑150 (MQ=255) cACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaat < 2:2743008/150‑1 (MQ=255) aCTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaata > 1:2086162/1‑150 (MQ=255) aCTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCGGGGtaata > 1:4211498/1‑150 (MQ=255) aCTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaata > 1:4210925/1‑150 (MQ=255) aCTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGtaata > 1:1481490/1‑150 (MQ=255) tGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTaataat < 1:3721897/150‑1 (MQ=255) tGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTaataat > 1:3802104/1‑150 (MQ=255) cAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTg < 2:311670/150‑1 (MQ=255) ggTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGAt < 2:637251/150‑1 (MQ=255) aCCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGt > 2:3578246/1‑150 (MQ=255) gtccggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTAttt < 1:1583558/150‑1 (MQ=255) gtccggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTAttt < 1:957429/150‑1 (MQ=255) gtccggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTAttt < 1:443504/150‑1 (MQ=255) ccggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCt < 2:593093/150‑1 (MQ=255) cggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCtt > 1:4001567/1‑150 (MQ=255) ggtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTa > 1:1811071/1‑150 (MQ=255) gtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTAt < 1:3239625/150‑1 (MQ=255) gtTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTAt < 2:1253513/150‑1 (MQ=255) ggCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTg > 2:4035544/1‑150 (MQ=255) cATGTGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGTCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGta < 2:3811204/150‑1 (MQ=255) cATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGta < 2:1598617/150‑1 (MQ=255) aTGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGtaa < 1:3030320/150‑1 (MQ=255) aaTTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATaaaaa > 1:1118842/1‑150 (MQ=255) tttCGCGTTTGTAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAAtt > 2:1312733/1‑150 (MQ=255) tttCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACGTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAAtt < 2:3687534/150‑1 (MQ=255) gcgTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCAc < 2:893038/150‑1 (MQ=255) gcgTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCAc < 1:287432/150‑1 (MQ=255) gcgTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGATATTTCTTATCTGTAATAAAAATTTCAc > 2:4044009/1‑150 (MQ=255) gTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCAccc > 1:1349854/1‑150 (MQ=255) tGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCa < 1:503135/150‑1 (MQ=255) aaGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGa < 1:2715576/150‑1 (MQ=255) tAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTc < 1:2298931/150‑1 (MQ=255) tAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTc < 1:3188899/150‑1 (MQ=255) ggTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTa < 2:1808464/150‑1 (MQ=255) tAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTAtt < 1:3434297/150‑1 (MQ=255) aGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTc > 2:4527494/1‑150 (MQ=255) gAAACGGCGGTTAATTACTATCGTCAGTACATCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCaa < 2:2916227/150‑1 (MQ=255) aCGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAAtt < 2:1203582/150‑1 (MQ=255) aCGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAAtt < 2:1203529/150‑1 (MQ=255) aCGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAAtt < 2:1611285/150‑1 (MQ=255) ggcggTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTc > 2:507262/1‑150 (MQ=255) ggTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTgg > 1:3557100/1‑150 (MQ=255) gTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGgt > 2:285973/1‑150 (MQ=255) aaGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGtt > 1:1684838/1‑150 (MQ=255) ttCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATg < 2:1349856/150‑1 (MQ=255) ttCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATg < 1:292138/150‑1 (MQ=255) tCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATgg > 1:3520601/1‑150 (MQ=255) gTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGtt < 2:320311/150‑1 (MQ=255) gTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGtt < 2:1045526/150‑1 (MQ=255) gTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGtt < 1:2547697/150‑1 (MQ=255) tCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGttt < 2:1509151/150‑1 (MQ=255) tCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGttt > 2:1280259/1‑150 (MQ=255) aGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTttga > 1:2695923/1‑150 (MQ=255) aGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTttga < 2:267837/150‑1 (MQ=255) aCATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGGttgattg > 2:2400195/1‑150 (MQ=255) tCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGaaa > 1:3993587/1‑150 (MQ=255) tCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGaaa > 1:2216752/1‑150 (MQ=255) tCCATACCGACTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCGGGTGTTACGCATGGTTTGATTGaaa < 1:961872/150‑1 (MQ=255) cATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAAt < 1:2023642/150‑1 (MQ=255) cATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAAt > 1:4004793/1‑150 (MQ=255) cATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAAt > 1:4419830/1‑150 (MQ=255) cATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAAt < 1:1231356/150‑1 (MQ=255) tACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATAc < 2:4286058/150‑1 (MQ=255) aCCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATAcc < 1:181630/150‑1 (MQ=255) ccGACTTCGTGGCGCGATACTTCTTCAAACAAGTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCg < 2:2539975/150‑1 (MQ=255) cGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAAGAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGt < 1:2360003/150‑1 (MQ=255) cTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGa < 2:4199152/150‑1 (MQ=255) cTTCGTGGAGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGa < 2:4200792/150‑1 (MQ=255) tCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGaaa > 2:3009929/1‑150 (MQ=255) cGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAAt > 1:2356991/1‑150 (MQ=255) gTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAATc < 1:760502/150‑1 (MQ=255) gcgcGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAATCCTg > 2:3334177/1‑150 (MQ=255) gcgcGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAATCCTg > 2:3333547/1‑150 (MQ=255) | CGTTGATCTCTTTGAATTTATCAACGTCAATAATCAGCACTGACAGCGGTGTACCGGTCCGGTTGGCATGGGCAATTTCGCGTTTGAAGATAGTCGGTAGGAAACGGCGGTTAAGTAATTTCGTCAGTACATCCATACCGACTTCGTGGCGCGATACTTCTTCAAACAATTCACGCAGCAAGGTAATAATTTGCGATACGGTATTTCTTATCTGTAATAAAAATTTCACCCGCAGACTTCTGTTATTCAAATTTCTGGTGTTACGCATGGTTTGATTGAAAATACCGTCGAAATCCTGA > CP009273/1560374‑1560672 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |