| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,670,193 | G→T | 9.7% | A142E (GCG→GAG) | pntB ← | pyridine nucleotide transhydrogenase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,670,193 | 0 | G | T | 9.7% | 901.6 / 47.9 | 257 | A142E (GCG→GAG) | pntB | pyridine nucleotide transhydrogenase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base G (106/124); new base T (12/13); total (119/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
GCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACGAA > CP009273/1670044‑1670341 | gCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACg < 2:3191732/150‑1 (MQ=255)gCAATGCCAGCACTTGCAGGCCGACGCGGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACg < 2:1657868/150‑1 (MQ=255) cAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGc > 2:3951130/1‑150 (MQ=255) tGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGccac < 2:237825/150‑1 (MQ=255) tGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGccac > 1:2135410/1‑150 (MQ=255) ccAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGccacca > 2:2428923/1‑150 (MQ=255) aGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCaccacc > 1:1565842/1‑150 (MQ=255) aCTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGaa > 1:1086710/1‑150 (MQ=255) aCTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGaa > 1:3363305/1‑150 (MQ=255) cTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAAc > 2:3943122/1‑150 (MQ=255) aGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTg < 1:3257878/150‑1 (MQ=255) aCGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGtt < 2:3989927/150‑1 (MQ=255) cGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTa < 1:1665832/150‑1 (MQ=255) gCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTAc < 1:767003/150‑1 (MQ=255) tGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCg < 1:3582975/150‑1 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcccc > 2:4498999/1‑150 (MQ=255) cGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGcccc > 1:3474855/1‑150 (MQ=255) gTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCg < 2:1699789/150‑1 (MQ=255) cGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATg > 2:4172405/1‑150 (MQ=255) gAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGa > 1:92219/1‑150 (MQ=255) gAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGa < 1:1730946/150‑1 (MQ=255) gAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGa < 1:3612951/150‑1 (MQ=255) cAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATTGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGa < 2:3041734/150‑1 (MQ=255) cAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGa > 1:1719849/1‑150 (MQ=255) aaaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGAt < 2:787021/150‑1 (MQ=255) aaaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGAt < 2:2092900/150‑1 (MQ=255) aaTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATa > 1:2230900/1‑150 (MQ=255) aTACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATAc < 2:2699251/150‑1 (MQ=255) aCAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg > 1:816087/1‑150 (MQ=255) aCAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCg > 2:2322565/1‑150 (MQ=255) aaTCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGTTTCATTTTTAGACGGTAAGTCAGCATCAATGGTTTATACTAAATCTTGCCACACAGTTTGCCGAAAGACACCACCGAACCCGAGAACGTTACCGCCCCGATGAAGAAACCGAg > 2:4318843/1‑150 (MQ=255) aaTCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATCCCGAg > 2:3276210/1‑150 (MQ=255) tCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGa > 2:1036953/1‑150 (MQ=255) agcagcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAac < 2:402312/150‑1 (MQ=255) cagcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAacac < 2:2778426/150‑1 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt > 2:3394977/1‑150 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt > 1:1197518/1‑150 (MQ=255) agcagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACt > 1:2785285/1‑150 (MQ=255) cagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 1:1438829/150‑1 (MQ=255) cagGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTc < 1:2484128/150‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 1:3949005/150‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 1:3943117/150‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 1:2991181/150‑1 (MQ=255) aggaaggaAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTcc < 1:2991144/150‑1 (MQ=255) aaaCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGt < 1:4513098/150‑1 (MQ=255) aCGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGa < 2:1003614/150‑1 (MQ=255) cGACCAGAGCCGCCAGGTTCATTTTGTGACGGATTGGCAGCATCAATGGATTAGACGAAATCTTGCCACACAGTTTCCCGAAACCCACAACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTACCGTCAAGTGaa > 2:3795317/1‑150 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 2:3703261/1‑150 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 2:3702085/1‑150 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 2:4389169/1‑150 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 1:3629527/1‑150 (MQ=255) gACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAat > 2:733552/1‑150 (MQ=255) cAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATAtt < 2:360525/150‑1 (MQ=255) agagCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTg > 1:4070680/1‑150 (MQ=255) gccgccAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGAcc < 2:1871729/150‑1 (MQ=255) ccgccAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCa < 2:253092/150‑1 (MQ=255) cAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAAt > 1:4273723/1‑150 (MQ=255) cAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAAt > 1:4273605/1‑150 (MQ=255) aGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATc > 1:3655898/1‑150 (MQ=255) aGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATc > 1:1859891/1‑150 (MQ=255) ttCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGt > 2:4542904/1‑150 (MQ=255) cATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGc > 2:4293464/1‑150 (MQ=255) tttGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCAt < 1:1298613/150‑1 (MQ=255) tttGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCAt < 2:3601321/150‑1 (MQ=255) ggTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGt < 2:698777/150‑1 (MQ=255) gTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTc < 1:1086115/150‑1 (MQ=255) tttGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCa < 1:3687653/150‑1 (MQ=255) tGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCatg < 2:1758991/150‑1 (MQ=255) cagcaTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCatgatg > 1:1967736/1‑150 (MQ=255) gcaTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCa < 2:1412872/150‑1 (MQ=255) caTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAg > 2:1281222/1‑150 (MQ=255) caTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAg < 2:2556570/150‑1 (MQ=255) caTCAATGGTTTAGACGAAATCGTGCCACACAGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAg < 2:3332220/150‑1 (MQ=255) aTCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGa > 1:3268606/1‑150 (MQ=255) cAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATa < 2:3399916/150‑1 (MQ=255) aTGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGc > 1:654387/1‑150 (MQ=255) tGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCt > 1:3660800/1‑150 (MQ=255) aGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaaa < 2:3543199/150‑1 (MQ=255) aGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTaaa < 2:3543160/150‑1 (MQ=255) gACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAg < 2:4018948/150‑1 (MQ=255) aCGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGc < 1:965400/150‑1 (MQ=255) aCGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGc < 2:2374034/150‑1 (MQ=255) cGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGcc < 2:4207847/150‑1 (MQ=255) cGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGcc < 2:3749862/150‑1 (MQ=255) gAAATCTTGCCACACAGATTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCa < 2:626952/150‑1 (MQ=255) aaTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAc > 1:1354880/1‑150 (MQ=255) aaTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAc > 1:3911980/1‑150 (MQ=255) aTCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAAcc > 2:3643759/1‑150 (MQ=255) cTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAg > 2:1737565/1‑150 (MQ=255) ccACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACt < 1:4435523/150‑1 (MQ=255) acacaGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgc < 1:1035729/150‑1 (MQ=255) acacaGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgc > 2:3785412/1‑150 (MQ=255) cacaGTTTGCCGAACTCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgcc < 1:476080/150‑1 (MQ=255) aGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTgccgcc < 2:1577713/150‑1 (MQ=255) gTTTGCCGAACGCCACCACCGAACCCGTGAACGGTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCa < 2:2884650/150‑1 (MQ=255) ttGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGATCACTTCCGTCAGGTTAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGa < 2:1625771/150‑1 (MQ=255) ttGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGa < 1:4352283/150‑1 (MQ=255) cGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCa < 1:2560820/150‑1 (MQ=255) gAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCAc > 1:2313261/1‑150 (MQ=255) cGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACGaa < 1:45423/150‑1 (MQ=255) | GCAATGCCAGCACTTGCAGGCCGACGCTGTCCGTGCGAACAAATACAATCAGCAGCAGGAAGGAAACGACCAGAGCCGCCAGGTTCATTTTGTGACGGTTTGGCAGCATCAATGGTTTAGACGAAATCTTGCCACACAGTTTGCCGAACGCCACCACCGAACCCGTGAACGTTACCGCCCCGATGAAGATACCGAGGAACACTTCCGTCAGGTGAATATTGACCAGAATCGGTGCCATTCCCGCGTCATGATGCAGATAGCTGTTAAAGCCAACCAGCACTGCCGCCAGACCCACGAA > CP009273/1670044‑1670341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |