| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,686,491 | T→A | 7.5% | A206A (GCA→GCT) | uidC ← | putative outer membrane porin for beta‑glucuronides porin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,686,491 | 0 | T | A | 7.5% | 667.6 / 31.1 | 209 | A206A (GCA→GCT) | uidC | putative outer membrane porin for beta‑glucuronides porin protein |
| Reads supporting (aligned to +/- strand): ref base T (91/102); new base A (9/7); total (100/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 213 total aligned reads displayed.
AGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAATGCTCC > CP009273/1686342‑1686640 | aaCTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTgcg < 1:2275703/150‑1 (MQ=255) cTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGcgcg > 2:4227378/1‑150 (MQ=255) tCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGa < 2:697773/150‑1 (MQ=255) cccTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATg > 2:778781/1‑150 (MQ=255) cTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGtt < 1:4237736/150‑1 (MQ=255) tCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTAt > 2:499588/1‑150 (MQ=255) tCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTAt < 2:3906413/150‑1 (MQ=255) cAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATc < 2:1244800/150‑1 (MQ=255) aCGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGt < 2:2115792/150‑1 (MQ=255) cGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTa > 1:1430658/1‑150 (MQ=255) cGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTa > 2:4126814/1‑150 (MQ=255) cGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTa > 1:1812981/1‑150 (MQ=255) ataATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGAGGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTAttt < 1:3567639/150‑1 (MQ=255) taATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTAtttt < 1:1647657/150‑1 (MQ=255) taATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATAATTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTAtttt < 2:1241715/150‑1 (MQ=255) aaTTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTc < 1:1918440/150‑1 (MQ=255) ttCGGGTCGAGCGGTATGCTTTTCTCGATAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTccc < 2:2532710/150‑1 (MQ=255) tCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCg > 1:3408778/1‑150 (MQ=255) gggTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGAGCGCGATGTTTATCGTATTGTCCCGTc < 2:3267896/150‑1 (MQ=255) ggTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCt > 1:2654482/1‑150 (MQ=255) ggTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGAGCGCGATGTTTATCGTATTTTCCCGTCt > 1:3521862/1‑150 (MQ=255) gTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTg > 1:2325061/1‑150 (MQ=255) tCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTgg > 1:2388194/1‑150 (MQ=255) aGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTg > 1:3143058/1‑150 (MQ=255) aGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTg > 2:4018540/1‑150 (MQ=255) gCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGt < 2:1525197/150‑1 (MQ=255) cGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGtt < 2:4097136/150‑1 (MQ=255) cGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGtt > 1:359477/1‑150 (MQ=255) cGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGtt < 1:1252774/150‑1 (MQ=255) cGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGGACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGtt < 2:4092271/150‑1 (MQ=255) ggTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTta > 2:1847747/1‑150 (MQ=255) gTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTtat < 2:3511595/150‑1 (MQ=255) gTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTtat < 2:3511678/150‑1 (MQ=255) gTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGAGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTtat > 2:709001/1‑150 (MQ=255) ttttCTCGAGAATACTGTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACAccc < 2:3367394/150‑1 (MQ=255) tttCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACAcccc < 2:922346/150‑1 (MQ=255) tttCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACAcccc > 1:2166890/1‑150 (MQ=255) ttCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTTCCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCt < 2:1138059/150‑1 (MQ=255) ttCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCt < 1:1625143/150‑1 (MQ=255) tctcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGAGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCtt < 1:23406/150‑1 (MQ=255) ctcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCTCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtc < 2:454844/150‑1 (MQ=255) ctcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCTCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtc < 2:3797704/150‑1 (MQ=255) ctcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtc < 1:1424183/150‑1 (MQ=255) tcGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtca < 2:3143117/150‑1 (MQ=255) cGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTtcat > 2:2178414/1‑150 (MQ=255) aCTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAAt < 2:4201403/150‑1 (MQ=255) cTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATa > 1:2301877/1‑150 (MQ=255) cTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATa > 2:3974292/1‑150 (MQ=255) tttGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATAc < 2:2009952/150‑1 (MQ=255) aTCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGgtt > 2:4539500/1‑150 (MQ=255) ttGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGaa < 1:1518717/150‑1 (MQ=255) tGGAATCTTCTTTCTGTACCGTTGCCCCAAGAGAATAGGGTCTGGTATCATCATGCCATCTGGCGGCTAATAAAGAACGTGCGCGATGTTTTTCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 1:2415276/150‑1 (MQ=255) tGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAAt < 1:2415810/150‑1 (MQ=255) aaaCATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAg < 2:765595/150‑1 (MQ=255) aaCATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGt > 1:3343980/1‑150 (MQ=255) aaCATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGt < 1:1311318/150‑1 (MQ=255) aCATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTc > 2:2932863/1‑150 (MQ=255) aTCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCa > 1:3092111/1‑150 (MQ=255) tCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATaaaa > 1:836518/1‑150 (MQ=255) tCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATaaaa > 1:4286846/1‑150 (MQ=255) aCCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACt < 2:434089/150‑1 (MQ=255) aCCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACt < 2:434338/150‑1 (MQ=255) ccGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTc < 2:4297538/150‑1 (MQ=255) gATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGt > 2:3157179/1‑150 (MQ=255) aTGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTg < 1:4413571/150‑1 (MQ=255) ccAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGcc < 1:1140200/150‑1 (MQ=255) cAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCca > 2:1399339/1‑150 (MQ=255) agagAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCcac > 2:1773986/1‑150 (MQ=255) gaATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACAtt > 2:680330/1‑150 (MQ=255) aTAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTcc > 2:362686/1‑150 (MQ=255) gACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCcaca > 1:3998009/1‑150 (MQ=255) gACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCcaca > 1:371530/1‑150 (MQ=255) aCTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAg > 2:2207406/1‑150 (MQ=255) aCTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCACACAg < 1:3915676/150‑1 (MQ=255) aCTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCACACAg < 1:3915234/150‑1 (MQ=255) ggTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATc > 2:4027443/1‑150 (MQ=255) ggTAACATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTATCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATc > 2:1461020/1‑150 (MQ=255) tATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCaa > 1:3036354/1‑150 (MQ=255) catcatGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAatat < 1:3171039/150‑1 (MQ=255) tGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGgt < 2:3757983/150‑1 (MQ=255) tGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGgt > 2:1113733/1‑150 (MQ=255) ccAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGgtgt > 2:348559/1‑150 (MQ=255) cAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGtt > 1:2780840/1‑150 (MQ=255) cAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGtt > 1:1322979/1‑150 (MQ=255) cAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCACGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGtt > 1:2085945/1‑150 (MQ=255) cAACTGGCGGCTAAAAAAGAACGAGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGtt < 2:2292909/150‑1 (MQ=255) aaCTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTa < 2:3068821/150‑1 (MQ=255) tGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAg < 2:3481767/150‑1 (MQ=255) tGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAg > 2:4455263/1‑150 (MQ=255) tGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAg < 2:2706896/150‑1 (MQ=255) gcggcTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGcc < 2:4133968/150‑1 (MQ=255) gcTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCaa < 1:2406540/150‑1 (MQ=255) cTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACAGTCCCCACAGATCAATATTTGGTGTTAAAGCCCAAt < 1:1722577/150‑1 (MQ=255) tAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATATACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATa < 2:2915763/150‑1 (MQ=255) tAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATa > 1:134960/1‑150 (MQ=255) aaaaGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAAcc > 1:3217705/1‑150 (MQ=255) gAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAAt > 1:3491431/1‑150 (MQ=255) aaCGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAATg > 1:982739/1‑150 (MQ=255) gTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAATGCTc > 2:2443216/1‑150 (MQ=255) tGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAATGCTcc > 1:134279/1‑150 (MQ=255) | AGCAACTCCCCTTTCAACGTATAATTCGGGTCGAGCGGTATGCTTTTCTCGAGAATACTTTGTATCTGATTGGAAACATCTTTCTGTACCGATGCCCCCAGAGAATAGCGACTGGTATCATCATGCCAACTGGCGGCTAAAAAAGAACGTGCGCGATGTTTATCGTATTTTCCCGTCTGGCTGTTATACACCCCTTCATCACGAATACCGGTTGTTGAATCAGTCCATAAAAATACTCGTGAACGCCACATTCCCCACAGATCAATATTTGGTGTTAAAGCCCAATAACCTAATGCTCC > CP009273/1686342‑1686640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |