| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,323,370 | G→T | 6.5% | pseudogene (4512/4605 nt) | yfaS ← | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,323,370 | 0 | G | T | 6.5% | 1264.5 / 38.3 | 337 | pseudogene (4512/4605 nt) | yfaS | pseudogene, bacterial alpha2‑macroglobulin YfaS variant family; putative membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (136/179); new base T (10/12); total (146/191) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 342 total aligned reads displayed.
CAAGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATT > CP009273/2323222‑2323519 | tGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGccc > 1:2073588/1‑150 (MQ=255) cAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCttt < 2:63382/150‑1 (MQ=255) cAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCttt > 1:2619999/1‑150 (MQ=255) agTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTg < 2:3768910/150‑1 (MQ=255) agTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTg > 2:947089/1‑150 (MQ=255) agTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTg < 2:1549819/150‑1 (MQ=255) tAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCg > 1:2237925/1‑150 (MQ=255) aaCGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAg > 2:4156496/1‑150 (MQ=255) aaCGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAg > 2:2214781/1‑150 (MQ=255) aaCGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAg > 2:1566429/1‑150 (MQ=255) cGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAgcg > 1:20989/1‑150 (MQ=255) ccAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCgca < 2:3580212/150‑1 (MQ=255) aGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCaaa > 2:2684389/1‑150 (MQ=255) cAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATgg < 1:104584/150‑1 (MQ=255) cAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATgg < 1:1128447/150‑1 (MQ=255) aGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGc < 1:3748852/150‑1 (MQ=255) cGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGa < 2:2426177/150‑1 (MQ=255) gATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGaa > 2:697645/1‑150 (MQ=255) aTTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGaaa > 1:3473786/1‑150 (MQ=255) cTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTg > 1:2987599/1‑150 (MQ=255) cTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTg > 1:1607644/1‑150 (MQ=255) cTGCGCCAGTTCACGTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTg < 1:3213026/150‑1 (MQ=255) tGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGa > 2:4453567/1‑150 (MQ=255) gcgcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGAc < 2:204272/150‑1 (MQ=255) cgcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGAcc < 1:2885783/150‑1 (MQ=255) cgcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGAcc < 2:3146659/150‑1 (MQ=255) cgcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGAcc < 2:864544/150‑1 (MQ=255) gcCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCg < 1:2763000/150‑1 (MQ=255) ccAGTTCACTTATTTCACCTGCATCCAGGTCCATTCACTCCCTGCCTCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGt < 2:3583202/150‑1 (MQ=255) cAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGtt < 1:4400774/150‑1 (MQ=255) cAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTGTTTGCGAGAAGCGCAGCAAATGGCGGAACGTGACCGtt > 2:3222408/1‑150 (MQ=255) gTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTcc > 1:3824300/1‑150 (MQ=255) gTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTcc > 1:3824630/1‑150 (MQ=255) gTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTcc < 1:3146797/150‑1 (MQ=255) ttCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTccc < 2:1702867/150‑1 (MQ=255) cACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGt > 2:1937257/1‑150 (MQ=255) aCTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTc > 2:3167370/1‑150 (MQ=255) ttATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAg < 1:608518/150‑1 (MQ=255) tATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGt < 1:1434149/150‑1 (MQ=255) aTTTCACCTACATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGtt > 2:839831/1‑150 (MQ=255) tttCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTc < 2:802526/150‑1 (MQ=255) ttCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCt > 1:1966001/1‑150 (MQ=255) ttCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCt < 1:918606/150‑1 (MQ=255) cACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCttt < 2:3418445/150‑1 (MQ=255) cATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCgg < 1:4160043/150‑1 (MQ=255) cccGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCAc > 2:543644/1‑150 (MQ=255) cccGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCAc < 2:2616127/150‑1 (MQ=255) cccGGTCCATTCACGCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCAc < 2:67593/150‑1 (MQ=255) cGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCa > 2:4124489/1‑150 (MQ=255) ggTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCat > 2:1079878/1‑150 (MQ=255) ggTCCATACACTCACTGCCGCAACTCTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCATGAGGCAGAACTAATTGCCCTTTTTGCGAGTAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCAGCat < 2:3754173/150‑1 (MQ=255) gTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCata > 2:167528/1‑150 (MQ=255) tCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCatat < 1:329364/150‑1 (MQ=255) ccATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCAtata < 1:264263/150‑1 (MQ=255) aTTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAgg > 1:2305643/1‑150 (MQ=255) ttCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGc > 1:3622622/1‑150 (MQ=255) tCACTCCCTGCCGCAACACTTTGCTGCGCAGGTTCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGcc < 1:2410096/150‑1 (MQ=255) tCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGcc < 2:4010947/150‑1 (MQ=255) tCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGcc < 1:1478232/150‑1 (MQ=255) aCTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAg < 2:2950061/150‑1 (MQ=255) cccTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACCTAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTGCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTc > 2:3708209/1‑150 (MQ=255) cccTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGATGCAGAACGAATTGCCATTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCAGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTc < 2:3493500/150‑1 (MQ=255) cGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcat < 1:344546/150‑1 (MQ=255) cAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcattt > 1:3016899/1‑150 (MQ=255) aaCACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcatttc > 1:990412/1‑150 (MQ=255) aaCACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCATTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCcatttc < 2:1632303/150‑1 (MQ=255) tgctgcGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTcgc > 1:1077674/1‑150 (MQ=255) tgcGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCt < 1:2466190/150‑1 (MQ=255) gcgcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCtt < 2:3724295/150‑1 (MQ=255) cgcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCttt < 2:4527158/150‑1 (MQ=255) cgcAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCttt < 2:1602819/150‑1 (MQ=255) ggTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTcc > 2:2091573/1‑150 (MQ=255) gTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCa < 2:2367368/150‑1 (MQ=255) cATAGGAACGCACATCACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCa < 2:3193751/150‑1 (MQ=255) cATAGGAACGCACATAACGAGCAGGAGGCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCa > 2:1308626/1‑150 (MQ=255) aTAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATCGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCaa < 1:789403/150‑1 (MQ=255) aGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAAtt < 2:3397880/150‑1 (MQ=255) ggAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTg > 2:615461/1‑150 (MQ=255) cGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGcccc < 2:1249445/150‑1 (MQ=255) gCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCct < 1:2315666/150‑1 (MQ=255) cacaTAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTAGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCctg > 2:3088644/1‑150 (MQ=255) aaCGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGtt < 2:1556693/150‑1 (MQ=255) aCGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGttt < 1:3713504/150‑1 (MQ=255) aCGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGttt < 2:2417734/150‑1 (MQ=255) cGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTc < 2:1498325/150‑1 (MQ=255) gAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTcg > 1:2483732/1‑150 (MQ=255) aggaggCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCgcggc > 2:1057616/1‑150 (MQ=255) ggCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTg > 2:3695066/1‑150 (MQ=255) gCAGAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTgg < 1:1774903/150‑1 (MQ=255) gAACTAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGtt > 1:3243570/1‑150 (MQ=255) gAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGtt < 1:391555/150‑1 (MQ=255) gAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGtt > 2:2603704/1‑150 (MQ=255) aaCGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGttt < 1:3223353/150‑1 (MQ=255) cGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAt > 2:466464/1‑150 (MQ=255) cGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAt < 1:3788592/150‑1 (MQ=255) cGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAt < 1:4251064/150‑1 (MQ=255) cGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAt > 1:4535434/1‑150 (MQ=255) cGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAt > 2:1193981/1‑150 (MQ=255) gAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTAtt > 2:1451695/1‑150 (MQ=255) gAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCAGTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTGTagt > 2:3715726/1‑148 (MQ=255) | CAAGTGTTGGCAGAGTAACCAACGCCAATAGCCAGACGATTCTGCGCCAGTTCACTTATTTCACCTGCATCCCGGTCCATTCACTCCCTGCCGCAACACTTTGCTGCGCAGGTGCATAGGAACGCACATAACGAGCAGGAGGCAGAACGAATTGCCCTTTTTGCGAGAAGCGCAGCAAATGGCGGAAAGTGACCGTTCCCGTCAGTTCTTTCACCGGCACCATATAGGCCAGTTCGCCCATTTCATTTCGCGCTTTTTCCAGCAATTGCCCCTGCTGTTTCGCGGCGTTGGGTTTATT > CP009273/2323222‑2323519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |