| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,538,683 | C→A | 7.4% | D96Y (GAT→TAT) | murR ← | repressor for murPQ, MurNAc 6‑P inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,538,683 | 0 | C | A | 7.4% | 805.5 / 27.8 | 216 | D96Y (GAT→TAT) | murR | repressor for murPQ, MurNAc 6‑P inducible |
| Reads supporting (aligned to +/- strand): ref base C (96/104); new base A (6/10); total (102/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.49e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 227 total aligned reads displayed.
CCGCCCAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGACTGGCTAA > CP009273/2538535‑2538832 | ccGCCCAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAatca > 2:1915132/1‑150 (MQ=255) cccAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAAtcatca < 1:2436954/150‑1 (MQ=255) cccAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAAtaatca < 1:3904649/150‑1 (MQ=255) cccAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGAGTCAGTTTGCGCGCGATCACTTCCAGCGAAtcatca < 1:2437728/150‑1 (MQ=255) ccAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCAc > 2:2263054/1‑150 (MQ=255) cAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACt < 1:2553471/150‑1 (MQ=255) ccGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTaa < 2:3433428/150‑1 (MQ=255) cGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAAt < 1:1406086/150‑1 (MQ=255) tATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGa > 2:2113848/1‑150 (MQ=255) aTCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGaa > 2:3691256/1‑150 (MQ=255) tCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAAc < 1:3078118/150‑1 (MQ=255) tGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACtg > 1:4121469/1‑150 (MQ=255) aTAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgc > 1:3163573/1‑150 (MQ=255) aTAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAATCGAACTgtgc < 2:1414696/150‑1 (MQ=255) tAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgca > 1:2563550/1‑150 (MQ=255) aaCGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgcagg < 2:259131/150‑1 (MQ=255) ggTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgcaggtgc < 2:2722036/150‑1 (MQ=255) ggTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgcaggtgc > 2:2642366/1‑150 (MQ=255) gTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTgtgcaggtgca < 2:4418677/150‑1 (MQ=255) gCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGt < 1:2124783/150‑1 (MQ=255) gCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGt > 2:1177238/1‑150 (MQ=255) tACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCg < 2:2410644/150‑1 (MQ=255) tACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCg < 2:2404040/150‑1 (MQ=255) tACTGATGACCTCAATGATTTTGTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCg < 2:107717/150‑1 (MQ=255) cTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTg > 1:1257154/1‑150 (MQ=255) tgatgaCCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTgg > 1:154849/1‑150 (MQ=255) atgaCCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCa < 2:1267168/150‑1 (MQ=255) atgaCCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCa < 2:964284/150‑1 (MQ=255) atgaCCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCa < 2:512228/150‑1 (MQ=255) gaCCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCAtt > 1:1075901/1‑150 (MQ=255) tCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGtt > 1:2313884/1‑150 (MQ=255) aaTGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGtttt > 1:3970585/1‑150 (MQ=255) aaTGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGtttt > 1:164047/1‑150 (MQ=255) gATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTtctc > 2:1800235/1‑150 (MQ=255) gATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTtctc < 2:3427961/150‑1 (MQ=255) gATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTtctc > 2:2192013/1‑150 (MQ=255) ttGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCt > 2:3062133/1‑150 (MQ=255) cAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGACGTGGCATTCGTTTTCTCCCGGCTGGc > 1:272502/1‑150 (MQ=255) gCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCAc > 1:4382355/1‑150 (MQ=255) cgcgcgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTg > 2:3921857/1‑150 (MQ=255) gcgcgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGt < 1:944399/150‑1 (MQ=255) cgcgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTa < 1:457228/150‑1 (MQ=255) cgcgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTa < 1:457269/150‑1 (MQ=255) gcgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTAt < 1:2006909/150‑1 (MQ=255) cgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTAtt < 1:2596999/150‑1 (MQ=255) cgTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTAtt > 2:1837943/1‑150 (MQ=255) gTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTc > 1:1169195/1‑150 (MQ=255) gTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTc > 2:1664534/1‑150 (MQ=255) tAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCg < 1:1050029/150‑1 (MQ=255) tAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCg < 1:461617/150‑1 (MQ=255) tAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCg > 2:1398655/1‑150 (MQ=255) aaTCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGc < 1:2995472/150‑1 (MQ=255) tCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCt < 2:2178933/150‑1 (MQ=255) cGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTa > 2:4078402/1‑150 (MQ=255) aGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTAtt > 2:986776/1‑150 (MQ=255) aGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTAtt < 2:4511479/150‑1 (MQ=255) aGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTAtt > 2:3569055/1‑150 (MQ=255) gCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTa < 2:409057/150‑1 (MQ=255) aaCGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAAc > 1:1728701/1‑150 (MQ=255) cgcAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCa > 1:4317619/1‑150 (MQ=255) aGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATAc > 1:2430647/1‑150 (MQ=255) aGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATAc > 2:889551/1‑150 (MQ=255) aGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATAATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATAc < 2:589146/150‑1 (MQ=255) gTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGc < 2:1543343/150‑1 (MQ=255) tttGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCa < 2:1296435/150‑1 (MQ=255) tGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAAt < 2:3814346/150‑1 (MQ=255) gCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAAtt > 1:1540342/1‑150 (MQ=255) tCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCa < 1:2511832/150‑1 (MQ=255) ccAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAg < 1:3242662/150‑1 (MQ=255) cgcCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTaaa > 1:3471708/1‑150 (MQ=255) ccAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATc < 2:833347/150‑1 (MQ=255) ccAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATc > 2:2765784/1‑150 (MQ=255) aGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCt > 2:2297852/1‑150 (MQ=255) gCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTTCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCtt > 1:1958769/1‑150 (MQ=255) tctTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTgc < 2:3365364/150‑1 (MQ=255) ctTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTgcg < 1:3578813/150‑1 (MQ=255) ctTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCCAACTTTGCACGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTgcg < 1:4436727/150‑1 (MQ=255) ctTTTTCGCGAGTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTgcg < 1:3579260/150‑1 (MQ=255) ttCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGcc > 1:3302589/1‑150 (MQ=255) gATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGtt > 1:1009248/1‑150 (MQ=255) gATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCATTGCGCGCCGAGtt > 1:113749/1‑150 (MQ=255) aTTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGttt > 1:350036/1‑150 (MQ=255) aTTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGttt < 1:2827179/150‑1 (MQ=255) aGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTgg > 1:1978445/1‑150 (MQ=255) aGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTgg > 1:4013643/1‑150 (MQ=255) cgcgATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAAttt < 1:192682/150‑1 (MQ=255) cgcgATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAAttt < 1:390742/150‑1 (MQ=255) cgcgATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAAttt < 1:1380391/150‑1 (MQ=255) cgATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCa > 2:2628961/1‑150 (MQ=255) gATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCAc > 1:3791291/1‑150 (MQ=255) gATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCAc > 2:3027887/1‑150 (MQ=255) aTCACTTCCAGCGAATAATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGCCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACt > 1:3704746/1‑150 (MQ=255) tCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTa > 1:836027/1‑150 (MQ=255) tCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTc < 2:4221225/150‑1 (MQ=255) aGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGAc < 1:674164/150‑1 (MQ=255) aGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGAc < 1:1595188/150‑1 (MQ=255) aGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGAc < 1:338348/150‑1 (MQ=255) aaTCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGACTGGc < 1:1905912/150‑1 (MQ=255) atcatcACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGACTGGCt > 1:2606048/1‑150 (MQ=255) tcatcaCTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCCCTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGACTGGCTa > 1:829093/1‑150 (MQ=255) | CCGCCCAGGCCCGTTATCTGGATAAACGGTGCTTTACTGATGACCTCAATGATTTTTTGCAGCCGCGCGTAATCGAGCAACGCGCAGGTTTGCTCCAGCGCCAGCTCTTTTTCGCGATTCAGTTTGCGCGCGATCACTTCCAGCGAATCATCACTGGTAATCGAACTGTGCAGGTGCAGTGCCGTGGCATTCGTTTTCTCCCGGCTGGCACTGTATTCGCCTATTAACGCCATACGCAATTCAGTAAATCCTTGCGCGCCGAGTTTTTGGGCAAATTTCACTATGCTCGACTGGCTAA > CP009273/2538535‑2538832 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |