| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,552,999 | A→T | 6.8% | A261A (GCA→GCT) | intZ → | CPZ‑55 prophage; putative phage integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,552,999 | 0 | A | T | 6.8% | 774.5 / 35.0 | 237 | A261A (GCA→GCT) | intZ | CPZ‑55 prophage; putative phage integrase |
| Reads supporting (aligned to +/- strand): ref base A (131/90); new base T (8/8); total (139/98) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.87e-01 | |||||||||||
Only 100 of 253 total aligned reads displayed.
CCGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTT > CP009273/2552850‑2553148 | ccGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGca < 2:2095874/150‑1 (MQ=255) gATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGcaac > 2:2466310/1‑150 (MQ=255) gATTAGTGAAATTCCGGCCTTCAACAAAGCCCTTGAGAGGGCCGCGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGAACGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGcacc > 2:1575066/1‑148 (MQ=255) aTTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGACATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGcaaca > 1:2606083/1‑150 (MQ=255) gAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATcaca < 2:4167631/150‑1 (MQ=255) aaaTTCCGGCCTTCAACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCCGAACTGCGTTTGTGCCGTTGGGACTGGATAAACCTGGAGGACGCAACAATCACAt > 2:4398587/1‑150 (MQ=255) ccGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATACAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGccc < 2:1411310/150‑1 (MQ=255) ggCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGc > 1:4360278/1‑150 (MQ=255) aCAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCa > 2:3293344/1‑150 (MQ=255) aCAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGGTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCa > 2:4022946/1‑150 (MQ=255) cAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCAt < 1:3964039/150‑1 (MQ=255) aaaGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATg > 2:4127759/1‑150 (MQ=255) cccTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAgg < 1:1325700/150‑1 (MQ=255) cccTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAgg > 2:2800095/1‑150 (MQ=255) ccTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGc > 2:3017359/1‑150 (MQ=255) ccTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGc > 2:2494346/1‑150 (MQ=255) cTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGcc > 1:1398769/1‑150 (MQ=255) ttagagGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCccg > 2:2884568/3‑150 (MQ=255) gagGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCccgccg > 2:3405664/1‑150 (MQ=255) cGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCa > 1:43062/1‑150 (MQ=255) cGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCa > 1:322280/1‑150 (MQ=255) ggAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtg > 2:3639332/1‑150 (MQ=255) ggAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtg < 2:4084830/150‑1 (MQ=255) gAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtgt > 1:2308112/1‑150 (MQ=255) aGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtgtg > 1:2725025/1‑150 (MQ=255) cGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGt > 1:3418219/1‑150 (MQ=255) aGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGc > 2:180700/1‑150 (MQ=255) aGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGc > 2:4465073/1‑150 (MQ=255) aGATACAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGACGTTGGGAATGGATAAACCTGGAGGACGCAAAAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGc > 2:2741666/1‑150 (MQ=255) aTTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTa < 2:1134404/150‑1 (MQ=255) gACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACg < 2:4011435/150‑1 (MQ=255) cGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGc < 1:3841159/150‑1 (MQ=255) aTACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCg > 2:1367154/1‑150 (MQ=255) aTACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCg > 2:1232978/1‑150 (MQ=255) tACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCgg < 1:4486792/150‑1 (MQ=255) aCGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGt > 2:1859531/1‑150 (MQ=255) tttGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGa > 1:744064/1‑150 (MQ=255) tttGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGa < 1:4107682/150‑1 (MQ=255) cTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTa > 2:4313664/1‑150 (MQ=255) cTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTa > 1:723166/1‑150 (MQ=255) ttATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTAt > 2:2176479/1‑150 (MQ=255) ttATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTAt > 1:3195914/1‑150 (MQ=255) atTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCa > 2:2844961/1‑150 (MQ=255) atTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCa > 2:3553587/1‑150 (MQ=255) atTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCa > 2:349268/1‑150 (MQ=255) aCGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACAGTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAc < 2:2996734/150‑1 (MQ=255) aCGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAc < 2:1280544/150‑1 (MQ=255) cGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAcc < 1:2371032/150‑1 (MQ=255) cGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAcc < 2:132917/150‑1 (MQ=255) ggCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCa > 1:1476606/1‑150 (MQ=255) ggCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCa > 1:1592056/1‑150 (MQ=255) gCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAg > 1:1850800/1‑150 (MQ=255) gCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAg < 1:865614/150‑1 (MQ=255) cATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGt > 1:4062352/1‑150 (MQ=255) aTTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGtt > 1:2244139/1‑150 (MQ=255) ttAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTc > 1:1623550/1‑150 (MQ=255) ttAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTc > 1:2082527/1‑150 (MQ=255) aaGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTcac > 1:2008765/1‑150 (MQ=255) aaGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTcac > 2:1649365/1‑150 (MQ=255) aaGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTcac > 1:2008801/1‑150 (MQ=255) aGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTcaca > 2:1232825/1‑150 (MQ=255) gACAGCAGAACTGCGTTTGTTCCGTTGGGAATGGATAAAACTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACg < 1:3666308/150‑1 (MQ=255) cGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAg > 1:2789534/1‑150 (MQ=255) gCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGc < 2:3102328/150‑1 (MQ=255) cAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCg > 1:3133085/1‑150 (MQ=255) aaCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGAt > 1:1657863/1‑150 (MQ=255) aCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATa < 2:4330803/150‑1 (MQ=255) aCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATa < 2:4330714/150‑1 (MQ=255) aCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATa < 1:3356065/150‑1 (MQ=255) cTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATAc > 1:2254778/1‑150 (MQ=255) cTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATAc > 1:2253814/1‑150 (MQ=255) gTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTg < 2:761947/150‑1 (MQ=255) tttGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGAGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGc > 1:4435626/1‑150 (MQ=255) ttGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCt < 1:1807542/150‑1 (MQ=255) tgCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATCCAGTGCTTTc > 2:801165/1‑150 (MQ=255) tgCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTc > 1:1629539/1‑150 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt < 2:1352204/150‑1 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt < 2:2655836/150‑1 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt < 2:3337335/150‑1 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt < 2:3621600/150‑1 (MQ=255) ttGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCtt < 1:4103331/150‑1 (MQ=255) ggAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTcc < 2:1674798/150‑1 (MQ=255) aTGGATAAACCTGGTGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAgg < 2:108392/150‑1 (MQ=255) aTGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAgg < 2:1077013/150‑1 (MQ=255) aTAAACCTGGAGGACGCAACCATCTCAGTGCCCGCTTAAGTAATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGa < 1:8874/150‑1 (MQ=255) tAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGAt < 1:3773285/150‑1 (MQ=255) tAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGAt > 1:2919196/1‑150 (MQ=255) aaCCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTc > 2:2773600/1‑150 (MQ=255) aCCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCa < 1:3013579/150‑1 (MQ=255) ggaggaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGa > 1:3046777/1‑150 (MQ=255) gaggaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGAt > 2:57427/1‑150 (MQ=255) gaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATaaa > 2:891870/1‑150 (MQ=255) gaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATaaa > 1:1205207/1‑150 (MQ=255) aCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAAc < 2:370369/150‑1 (MQ=255) aCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAAc < 2:306377/150‑1 (MQ=255) aCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAAc < 2:600988/150‑1 (MQ=255) cGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAAcc < 2:1035148/150‑1 (MQ=255) caacaaTCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCt > 2:3879109/1‑150 (MQ=255) caacaaTCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCt > 2:1587286/1‑150 (MQ=255) aacaaTCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCtt > 2:3168220/1‑150 (MQ=255) | CCGATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTT > CP009273/2552850‑2553148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |