| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,556,367 | G→T | 9.3% | R162L (CGA→CTA) | yffP → | CPZ‑55 prophage; uncharacterized protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,556,367 | 0 | G | T | 9.3% | 921.7 / 44.9 | 254 | R162L (CGA→CTA) | yffP | CPZ‑55 prophage; uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base G (99/131); new base T (18/6); total (117/137) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.30e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
CAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCGGCAA > CP009273/2556218‑2556516 | gCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGaa > 2:120233/1‑150 (MQ=255) cAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAAc < 1:3266099/150‑1 (MQ=255) aaGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACt > 1:22703/1‑150 (MQ=255) aaGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACt < 1:2220656/150‑1 (MQ=255) aaGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACt < 1:2220478/150‑1 (MQ=255) cTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCaaa < 1:1768183/150‑1 (MQ=255) ttGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAAc < 1:1032608/150‑1 (MQ=255) tGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACt < 2:92853/150‑1 (MQ=255) cTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGtt < 2:3059844/150‑1 (MQ=255) cTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGtt < 2:2339868/150‑1 (MQ=255) cTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGtt < 2:174236/150‑1 (MQ=255) tGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTc > 1:1620272/1‑150 (MQ=255) tGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTc > 1:1560841/1‑150 (MQ=255) ggTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCa < 1:1956998/150‑1 (MQ=255) gAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAAcg > 1:3834144/1‑150 (MQ=255) cTTATCGCACAAACACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGAGGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGa < 2:909702/150‑1 (MQ=255) ttATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGAt < 2:125241/150‑1 (MQ=255) ttATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGAt < 2:4140094/150‑1 (MQ=255) ttATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGAt < 2:4140065/150‑1 (MQ=255) aTCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGa > 1:434577/1‑150 (MQ=255) aTCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGa > 2:2081745/1‑150 (MQ=255) tCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGAc < 1:4453530/150‑1 (MQ=255) tCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGAc < 1:817694/150‑1 (MQ=255) tCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGAc < 1:817306/150‑1 (MQ=255) gCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACtt > 1:1681140/1‑150 (MQ=255) acaAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACtttt < 2:4017688/150‑1 (MQ=255) aaaGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCt < 1:408303/150‑1 (MQ=255) gACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAg > 1:464758/1‑150 (MQ=255) cacCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGa < 2:3918502/150‑1 (MQ=255) ccTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATa < 2:2341556/150‑1 (MQ=255) cTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAg < 1:4232884/150‑1 (MQ=255) tCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGcc < 2:1098039/150‑1 (MQ=255) tCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGcc > 2:734261/1‑150 (MQ=255) ggTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGcc > 1:1839011/1‑150 (MQ=255) gAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGa > 1:1575301/1‑150 (MQ=255) aaaCGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGAt < 2:3020173/150‑1 (MQ=255) aaaCGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGAt < 1:4290176/150‑1 (MQ=255) gTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGaa > 2:1646800/1‑150 (MQ=255) gTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGaa < 2:2846115/150‑1 (MQ=255) tttCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAg < 2:4441274/150‑1 (MQ=255) tCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAgtt < 2:347192/150‑1 (MQ=255) aaTACTTCCAAACGATGTACGACATGGAACGGCAAATCAACTCAAACCTGCCGGATGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAgttgg > 1:3203380/1‑150 (MQ=255) tACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAgttggtt < 2:3257654/150‑1 (MQ=255) aCTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAgttggttg < 1:942112/150‑1 (MQ=255) tCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGtg < 1:1898625/150‑1 (MQ=255) ccAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGtga < 1:3329739/150‑1 (MQ=255) aaaCGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGtgatg > 1:1003033/1‑150 (MQ=255) cGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGAtt > 2:1646106/1‑150 (MQ=255) cGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGAtt < 2:1614547/150‑1 (MQ=255) aTGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTAc > 1:1185375/1‑150 (MQ=255) tGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACg < 1:1062225/150‑1 (MQ=255) gTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGt > 2:3098124/1‑150 (MQ=255) gTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGt > 1:4072229/1‑150 (MQ=255) tACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTc > 1:4212791/1‑150 (MQ=255) tACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTc < 2:1416782/150‑1 (MQ=255) gACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTcccc > 2:2048197/1‑150 (MQ=255) gACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTcccc < 1:3863260/150‑1 (MQ=255) cATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCa < 2:869080/150‑1 (MQ=255) aTGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAg < 1:2857973/150‑1 (MQ=255) aTGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAg < 2:3777268/150‑1 (MQ=255) gAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCa > 1:2594888/1‑150 (MQ=255) aaCGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCAc > 1:2054148/1‑150 (MQ=255) aCGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCAcc > 2:4347336/1‑150 (MQ=255) ggCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCgg > 2:1779399/1‑150 (MQ=255) gCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGACGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGa > 2:3138707/1‑150 (MQ=255) aaTCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCa < 2:1804177/150‑1 (MQ=255) aTCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCaa < 1:2252474/150‑1 (MQ=255) aaCGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATc < 2:59298/150‑1 (MQ=255) aaaCCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTg > 1:3534490/1‑150 (MQ=255) aaaCCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTg > 1:3535202/1‑150 (MQ=255) aaCCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGa < 2:1533768/150‑1 (MQ=255) ccGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTc > 2:2325439/1‑150 (MQ=255) ggTTGGCGGCCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCgg > 2:3687517/1‑150 (MQ=255) gTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGa > 1:2861064/1‑150 (MQ=255) ttGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGAc < 2:335129/150‑1 (MQ=255) ttGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGAc < 2:605791/150‑1 (MQ=255) tGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACa < 2:22664/150‑1 (MQ=255) ggcggcCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACaa > 1:3210954/1‑150 (MQ=255) ggcCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGACTTTTCGGACAAAcg > 2:2732683/1‑150 (MQ=255) ggcCTTCCCAACGTTGACACAGAGCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcg > 2:2639078/1‑150 (MQ=255) ggcCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcg > 2:834289/1‑150 (MQ=255) ggcCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcg > 1:796410/1‑150 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg < 1:1380261/150‑1 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg < 1:601456/150‑1 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg > 1:3764144/1‑150 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg > 2:491539/1‑150 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg < 1:2274393/150‑1 (MQ=255) ttCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcg < 1:1234485/150‑1 (MQ=255) tCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAAcgcgcgc > 2:246400/1‑150 (MQ=255) cAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTa > 2:4066632/1‑150 (MQ=255) cAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTa > 2:1897177/1‑150 (MQ=255) cGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGcc > 1:2556018/1‑150 (MQ=255) cGTTGACACAGAGCGAACTGGCAAACTGTCCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGcc > 1:2556092/1‑150 (MQ=255) gTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCg > 2:2177040/1‑150 (MQ=255) cacaGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTc < 2:305643/150‑1 (MQ=255) gagCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCg < 1:2699701/150‑1 (MQ=255) gagCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCg < 1:2699586/150‑1 (MQ=255) agCTAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCgg > 1:789262/1‑150 (MQ=255) agCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCgg > 2:2412072/1‑150 (MQ=255) cGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCGGCa < 2:1046527/150‑1 (MQ=255) | CAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAACGCAAACCTGCCGGTTGGCGGCCTTCCCAACGTTGACACAGAGCGAACTGGCAAACTGTTCCAACGCGATGACTTTTCTGAGGATAGCCATGCCAACGATCCGAAGTTGGTTGGTGATGATTACGTCCCCCAGGCACCGGAGCAAATCAACTGAATTTTCGGACAAACGCGCGCGTAGCCGACGTCAGCGGCAA > CP009273/2556218‑2556516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |