| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,568,332 | G→T | 5.7% | R11S (CGT→AGT) | eutQ ← | RmlC‑like cupin domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,568,332 | 0 | G | T | 5.7% | 1066.9 / 27.0 | 282 | R11S (CGT→AGT) | eutQ | RmlC‑like cupin domain protein |
| Reads supporting (aligned to +/- strand): ref base G (127/139); new base T (8/8); total (135/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.66e-01 | |||||||||||
Only 100 of 293 total aligned reads displayed.
GGCGGGCACGGACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACTTT > CP009273/2568183‑2568481 | gCACGGACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAatat < 2:4136412/150‑1 (MQ=255) aCGGACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCa > 2:1439668/1‑150 (MQ=255) ggACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACTAATATCAtt < 1:3205487/150‑1 (MQ=255) ggACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCAtt < 1:1314547/150‑1 (MQ=255) aCGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCg < 1:4245263/150‑1 (MQ=255) aCGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCg < 1:358191/150‑1 (MQ=255) ttACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGtga > 1:2168910/1‑150 (MQ=255) aCCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGtgatg < 1:3250166/150‑1 (MQ=255) ggATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGtt < 2:2144624/150‑1 (MQ=255) ggATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGtt > 2:3395240/1‑150 (MQ=255) gATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGttt < 2:1496302/150‑1 (MQ=255) tCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGttttt > 2:927441/1‑150 (MQ=255) cGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGtttttt < 2:258589/150‑1 (MQ=255) aTTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCa > 2:1209979/1‑150 (MQ=255) aTTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCa < 2:1355255/150‑1 (MQ=255) aTTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCa < 2:1355322/150‑1 (MQ=255) catcaCATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCt < 1:1841631/150‑1 (MQ=255) catcaCATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCt > 2:4053844/1‑150 (MQ=255) catcaCATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCt > 2:4462369/1‑150 (MQ=255) catcaCATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGAGTGTGCTTCACGAATAACATTCGCTGTGATGAGTTTTTTCACCt > 2:3859780/1‑150 (MQ=255) tcaCATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGc > 1:1965525/1‑150 (MQ=255) acaTTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCtt > 2:3763198/1‑150 (MQ=255) tCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTtcctc < 2:2309088/150‑1 (MQ=255) tCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTtcctc > 2:3706119/1‑150 (MQ=255) gTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGTCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGACTATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTg < 1:4438210/150‑1 (MQ=255) gATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGtt > 2:202736/1‑150 (MQ=255) gATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGtt < 1:4498671/150‑1 (MQ=255) aTGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGttt < 1:2196729/150‑1 (MQ=255) aaaaCCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTga < 1:3906886/150‑1 (MQ=255) aaCCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTgaga < 1:852998/150‑1 (MQ=255) ccAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGAt > 2:2717186/1‑150 (MQ=255) aGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGc > 1:4113109/1‑150 (MQ=255) gATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGa > 2:107716/1‑150 (MQ=255) gATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGa > 2:107945/1‑150 (MQ=255) gATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGa > 2:429782/1‑150 (MQ=255) aTCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGAt < 1:404061/150‑1 (MQ=255) aTCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGAt < 1:404014/150‑1 (MQ=255) tCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATa > 2:653140/1‑150 (MQ=255) cACTTCACGGTCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATcca < 1:3739219/150‑1 (MQ=255) cACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATcca > 1:1084619/1‑150 (MQ=255) cACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATcca < 1:226765/150‑1 (MQ=255) aCTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATccac < 2:734693/150‑1 (MQ=255) tCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAg < 1:3006383/150‑1 (MQ=255) tCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAg > 1:1692304/1‑150 (MQ=255) tCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAg < 1:3387514/150‑1 (MQ=255) cACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGt < 1:2717269/150‑1 (MQ=255) cGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTtg > 1:562645/1‑150 (MQ=255) gggCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTtgc > 1:3319168/1‑150 (MQ=255) ggCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTtgct > 2:666679/1‑150 (MQ=255) gCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACTAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTtgctg < 2:1538736/150‑1 (MQ=255) gCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTtgctg < 1:243148/150‑1 (MQ=255) ggggTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCt > 1:4058993/1‑150 (MQ=255) gTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTg < 1:927441/150‑1 (MQ=255) ataatGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCgg > 1:3728111/1‑150 (MQ=255) taatGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCggg > 2:2887703/1‑150 (MQ=255) taatGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCggg < 2:1741687/150‑1 (MQ=255) actGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGGGTGCTTCACGAATATCATTCGCGGTGATGAGTTTTTTCCCCGGCTTCCTCCGGTTTGGTGAGAGATGCCAGCTCATCCACCAGTGGCTGCACGCTTTGCGGGt > 2:3299467/3‑150 (MQ=255) aatGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGt > 2:3471834/1‑150 (MQ=255) atGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCAGTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTc < 2:1837868/150‑1 (MQ=255) ggCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGc < 2:3954775/150‑1 (MQ=255) gcgcgcAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCt < 2:200636/150‑1 (MQ=255) cgcgcAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTg < 2:4342612/150‑1 (MQ=255) gcAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACTAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGttt < 1:415512/150‑1 (MQ=255) gcAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACTAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGttt < 1:2625414/150‑1 (MQ=255) cAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTa < 1:678647/150‑1 (MQ=255) gAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGc > 1:65309/1‑150 (MQ=255) aaCCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCt < 2:2423970/150‑1 (MQ=255) aaCCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCt > 2:2391810/1‑150 (MQ=255) aCCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTc > 2:2799291/1‑150 (MQ=255) aCCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTc > 2:513787/1‑150 (MQ=255) cGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAAc > 1:3660380/1‑150 (MQ=255) ggACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACa > 2:3209807/1‑150 (MQ=255) cATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCg < 1:1159798/150‑1 (MQ=255) cATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCg < 1:3612314/150‑1 (MQ=255) cATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCg < 1:2040032/150‑1 (MQ=255) aTTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCgg > 1:731523/1‑150 (MQ=255) ttGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGc < 2:1319939/150‑1 (MQ=255) ccTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGctct < 2:3949078/150‑1 (MQ=255) cTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCtt > 1:381704/1‑150 (MQ=255) cTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCtt > 1:1646894/1‑150 (MQ=255) cTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCtt > 1:1646816/1‑150 (MQ=255) gTTCGCCGCGCGCGTGTGCTTCACTAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCg > 2:4321297/1‑150 (MQ=255) gTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCg < 1:1534259/150‑1 (MQ=255) ttCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGAGGAGTTTTTTCACCTGCTTGCTCCTGTTTGGTGAGAGATGCCAGATATTCCACCAGTTTCTTCACTCTTTGCGGGTCGTGTCTGTTTAGCTCGAACATCGGCTCTTCgt < 2:4363914/150‑2 (MQ=255) ccgcGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACAAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAAcc > 1:395763/1‑150 (MQ=255) gcgcgcgTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCg < 1:1811247/150‑1 (MQ=255) gcgcgTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGtc < 2:4313132/150‑1 (MQ=255) cgcgTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGtct < 1:824877/150‑1 (MQ=255) cgcgTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGtct < 2:194893/150‑1 (MQ=255) cgTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCa < 2:284954/150‑1 (MQ=255) tgCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCa > 1:372977/1‑150 (MQ=255) tgCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCa < 2:3572709/150‑1 (MQ=255) tCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATaa > 2:2944966/1‑150 (MQ=255) cGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACtt < 1:2671989/150‑1 (MQ=255) cGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACtt < 2:4026215/150‑1 (MQ=255) gAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACttt < 1:1008630/150‑1 (MQ=255) gAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACttt > 2:3160969/1‑150 (MQ=255) gAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACttt > 2:818819/1‑150 (MQ=255) gAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACttt < 1:1011743/150‑1 (MQ=255) gAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGAGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACttt > 1:2811289/1‑150 (MQ=255) | GGCGGGCACGGACGCCGTTACCGGGATCGATTCATCACATTCGGTGATGGTAAAACCCAGTAGATCCGCCACTTCACGGGCTTCCGGGGTAATAATGCTGGCGCGCAGAACCACGGACATTGCCTGTTCGCCGCGCGCGTGTGCTTCACGAATATCATTCGCTGTGATGAGTTTTTTCACCTGCTTCCTCCTGTTTGGTGAGAGATGCCAGATAATCCACCAGTTGCTGCACGCTTTGCGGGTCGTGGCTGTTTAGCTCGAACATCGGCTCTTCGAAACCCGTCTCAAGCAATAACTTT > CP009273/2568183‑2568481 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |