| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,576,879 | G→T | 8.1% | intergenic (‑42/+26) | nudK ← / ← aegA | GDP‑mannose pyrophosphatase/putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,576,879 | 0 | G | T | 8.1% | 912.6 / 36.5 | 246 | intergenic (‑42/+26) | nudK/aegA | GDP‑mannose pyrophosphatase/putative oxidoreductase, FeS binding subunit/NAD/FAD‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base G (121/105); new base T (13/7); total (134/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 254 total aligned reads displayed.
CGGATAACTTCGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCGAAGATT > CP009273/2576731‑2577028 | tAACTTCGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTc < 1:3932409/150‑1 (MQ=255) cGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGttt < 2:3582638/150‑1 (MQ=255) cGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGttt > 2:3100671/1‑150 (MQ=255) cGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGttt > 2:2112011/1‑150 (MQ=255) cGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGttt > 1:1811515/1‑150 (MQ=255) gCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTg > 1:4404996/1‑150 (MQ=255) ccGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGt > 1:1012214/1‑150 (MQ=255) cGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTc > 2:1658238/1‑150 (MQ=255) cTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTgc > 1:4051818/1‑150 (MQ=255) ttGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTgcgc < 2:2287287/150‑1 (MQ=255) gcgcGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAg < 2:1981278/150‑1 (MQ=255) gTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTa < 2:3998378/150‑1 (MQ=255) agaTCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCa > 1:4090996/1‑150 (MQ=255) gtaagtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTgag > 1:1060947/1‑150 (MQ=255) taagtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTgaga > 2:2487367/1‑150 (MQ=255) taagtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTgaga < 1:1507133/150‑1 (MQ=255) taagtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTgaga < 1:1506948/150‑1 (MQ=255) aagtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGAt > 2:2572045/1‑150 (MQ=255) agtaaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGAtt < 1:1963990/150‑1 (MQ=255) taaTGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTg < 1:3017638/150‑1 (MQ=255) tgtgCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGAt < 2:1939595/150‑1 (MQ=255) gtgCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGAtt < 2:737932/150‑1 (MQ=255) tgCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGAttt < 1:4311631/150‑1 (MQ=255) tGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTAccccc > 1:2513704/1‑150 (MQ=255) gAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCcca > 2:4259704/1‑150 (MQ=255) gAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCcca < 2:1767687/150‑1 (MQ=255) gAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTGGGTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCcca < 1:3234045/150‑1 (MQ=255) tAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCccagcca < 1:2596694/150‑1 (MQ=255) tAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCccagcca < 1:2596734/150‑1 (MQ=255) aGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTATGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCccagccag > 2:2555697/1‑150 (MQ=255) aGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCccagccag > 1:221203/1‑150 (MQ=255) aGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCccagccag < 1:2870106/150‑1 (MQ=255) gTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGt < 1:156691/150‑1 (MQ=255) gTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGt < 2:3787821/150‑1 (MQ=255) ttATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTc < 1:3416370/150‑1 (MQ=255) aTCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGAGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCaa < 2:183943/150‑1 (MQ=255) ggAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCaataa > 1:208417/1‑150 (MQ=255) gagagaATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCaataat < 2:1927695/150‑1 (MQ=255) gagagaATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCaataat < 2:2440962/150‑1 (MQ=255) gagagaATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCaataat < 1:2881170/150‑1 (MQ=255) aaTTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCt < 1:3189621/150‑1 (MQ=255) aaTTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCt < 1:1150876/150‑1 (MQ=255) aTTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCtg > 2:2173160/1‑150 (MQ=255) ttttGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCtgt < 1:2590898/150‑1 (MQ=255) tttGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCtgtg > 1:182094/1‑150 (MQ=255) tttGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCtgtg > 1:2482411/1‑150 (MQ=255) tCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGc > 2:3358628/1‑150 (MQ=255) cTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCa > 2:2025742/1‑150 (MQ=255) ttAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATg > 1:4038551/1‑150 (MQ=255) ttAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATg < 1:3887965/150‑1 (MQ=255) tAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGa > 2:1650451/1‑150 (MQ=255) tAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGAATTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGa > 2:2735910/1‑150 (MQ=255) gAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTc > 1:1748987/1‑150 (MQ=255) gAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTc > 2:4519530/1‑150 (MQ=255) gAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTc > 2:4271697/1‑150 (MQ=255) gAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTc > 2:26847/1‑150 (MQ=255) aGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTcc > 1:1225355/1‑150 (MQ=255) aGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTcc > 1:721979/1‑150 (MQ=255) aGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTcc > 1:2761834/1‑150 (MQ=255) ggTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCtt > 1:870096/1‑150 (MQ=255) ggTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGACGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCtt > 2:2868885/1‑150 (MQ=255) gTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTc > 2:1885189/1‑150 (MQ=255) gTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTc < 1:2337307/150‑1 (MQ=255) aTTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCACTGTGCCGCATGACGTCCTTCTGc > 2:4070298/1‑150 (MQ=255) tgttgCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCAt > 1:971332/1‑150 (MQ=255) gttgCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCAtt > 1:1284233/1‑150 (MQ=255) ttgCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTg < 2:388439/150‑1 (MQ=255) gTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGt < 1:3358628/150‑1 (MQ=255) gTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGt > 1:593942/1‑150 (MQ=255) tCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTa > 2:1303895/1‑150 (MQ=255) aTACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAac > 2:2261285/1‑150 (MQ=255) ccGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAaccac < 2:1957271/150‑1 (MQ=255) ccGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAaccac > 2:2822192/1‑150 (MQ=255) cGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAaccacc > 2:1550222/1‑150 (MQ=255) aCTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAg > 2:3959776/1‑150 (MQ=255) aCTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAg < 1:1151471/150‑1 (MQ=255) aGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGca < 2:4056513/150‑1 (MQ=255) gcgcGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGcac < 1:2854524/150‑1 (MQ=255) cgcgAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGcacc > 1:1951302/1‑150 (MQ=255) gcgAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAAGCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGcacca < 1:2451720/150‑1 (MQ=255) cgAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGcaccac < 2:113400/150‑1 (MQ=255) gAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACcacg > 1:3040011/1‑150 (MQ=255) aaaTGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACcacgc > 2:509022/1‑150 (MQ=255) aaaTGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACcacgc > 2:508825/1‑150 (MQ=255) gAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACgg < 2:1346295/150‑1 (MQ=255) cAATTATCTTACGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGt > 1:1572421/1‑150 (MQ=255) aTTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTca > 2:1674863/1‑150 (MQ=255) tATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTcacc < 1:3477693/150‑1 (MQ=255) tATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTcacc < 1:3477874/150‑1 (MQ=255) tATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTcacc < 1:1721076/150‑1 (MQ=255) aTCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTcacca > 1:1976774/1‑150 (MQ=255) tCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTcaccac < 2:4512056/150‑1 (MQ=255) tACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAg < 1:1776032/150‑1 (MQ=255) aCGCTGTTAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGc < 1:3909198/150‑1 (MQ=255) aCGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGc < 1:194567/150‑1 (MQ=255) cGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCg < 1:841812/150‑1 (MQ=255) cGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCg < 1:3729625/150‑1 (MQ=255) cGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCg < 1:3124678/150‑1 (MQ=255) tgtgAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCGAAg < 1:3224722/150‑1 (MQ=255) tgtgAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCGAAg < 1:2545071/150‑1 (MQ=255) | CGGATAACTTCGCCGTCTTTGCGCGTGAGATCGTAAGTAATGTTGTGCAGGGTGAAATAGTTATCGGAGAGAATTTTGTCTTTAATGAGGGTGATTTGTTGCGTCATACCGACTCCACAGCGCGAAATGAACAATTATCTTACGCTGTGAAGTCGGGTTTGTCTGCGCAGGCTATCAGTGAGATTTGACTGATTTTACCCCCAGCCAGTCAATAATCCCCTGTGCCGCATGACGTCCTTCTGCCATTGCGGTAACCACCAGATCCGCACCACGCACGGCGTCACCACCAGCGAAGATT > CP009273/2576731‑2577028 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |