| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,610,619 | C→A | 12.6% | G389G (GGC→GGA) | bepA → | periplasmic metalloprotease and chaperone for OM protein maintenance and assembly |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,610,619 | 0 | C | A | 12.6% | 970.9 / 77.1 | 291 | G389G (GGC→GGA) | bepA | periplasmic metalloprotease and chaperone for OM protein maintenance and assembly |
| Reads supporting (aligned to +/- strand): ref base C (141/113); new base A (20/17); total (161/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 291 total aligned reads displayed.
CTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATGC > CP009273/2610471‑2610765 | cTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCACTCCGGTGTTGCAGCTCAACCTGGCGAACGCTGATTTGCAAGGCg > 2:4329028/1‑150 (MQ=255)cTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCg < 1:412062/150‑1 (MQ=255) ggCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGt < 1:1423338/150‑1 (MQ=255) gCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTc < 1:3996455/150‑1 (MQ=255) cAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCa < 1:2635136/150‑1 (MQ=255) cAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCa > 1:1920852/1‑150 (MQ=255) aCGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAAc < 1:1202141/150‑1 (MQ=255) aCGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAAc < 2:2622997/150‑1 (MQ=255) cGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTACAAGGCGGTCAAcc < 2:1563539/150‑1 (MQ=255) aTGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACcaca > 2:1273192/1‑150 (MQ=255) ggTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACaag < 1:2526228/150‑1 (MQ=255) gTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACaaga < 1:3975322/150‑1 (MQ=255) tATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACaagaa > 2:21767/1‑150 (MQ=255) ctcGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCg < 2:540119/150‑1 (MQ=255) cGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGc < 1:2070504/150‑1 (MQ=255) aTCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCa < 1:2804529/150‑1 (MQ=255) gCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATAtt < 1:4070643/150‑1 (MQ=255) aCTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTg > 1:707763/1‑150 (MQ=255) tatCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCg < 2:3167764/150‑1 (MQ=255) cGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCCCCCCCGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTa < 1:1064877/150‑1 (MQ=255) cGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTa > 2:3578250/1‑150 (MQ=255) gATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTac > 2:3323749/1‑150 (MQ=255) aTCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTaca > 1:1328267/1‑150 (MQ=255) aTCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTaca > 1:38457/1‑150 (MQ=255) tCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTacac > 1:4254224/1‑150 (MQ=255) ttGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCt < 2:3533490/150‑1 (MQ=255) ttGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCt < 2:1703548/150‑1 (MQ=255) ttGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCt < 1:2462061/150‑1 (MQ=255) gggCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCttt < 1:1456985/150‑1 (MQ=255) aaaaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaata > 2:3502000/1‑150 (MQ=255) aaaaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaata > 1:1299384/1‑150 (MQ=255) aaaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataa > 2:4534366/1‑150 (MQ=255) aaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataat > 1:2972290/1‑150 (MQ=255) aaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataat > 2:771560/1‑150 (MQ=255) aaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataat > 2:771667/1‑150 (MQ=255) aaCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataat < 1:1149983/150‑1 (MQ=255) aCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataata > 1:2327260/1‑150 (MQ=255) aCAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTtaataata < 2:1330039/150‑1 (MQ=255) aaaGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATaaa < 1:3492409/150‑1 (MQ=255) aaGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAg > 1:1420912/1‑150 (MQ=255) ccAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATg > 1:1146010/1‑150 (MQ=255) aTGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACa > 2:2710281/1‑150 (MQ=255) aTGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACa < 1:871000/150‑1 (MQ=255) tGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAg > 2:3803289/1‑150 (MQ=255) gAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGc > 1:3937686/1‑150 (MQ=255) ggCGATCTATCGTATGAAAAATGCCCTCTATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACTCCTTTAATCATAAAGATGACAGCaa < 1:1401780/150‑1 (MQ=255) ggCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCaa < 1:883111/150‑1 (MQ=255) ggCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCaa < 1:950603/150‑1 (MQ=255) gATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACgg > 1:1214553/1‑150 (MQ=255) gATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACgg < 1:1518198/150‑1 (MQ=255) aTCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGc > 1:372787/1‑150 (MQ=255) aTCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGc < 1:3088706/150‑1 (MQ=255) cAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTg > 1:3859111/1‑150 (MQ=255) tCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATCTTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGa < 2:791655/150‑1 (MQ=255) tCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGa < 2:791610/150‑1 (MQ=255) tGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGc > 2:1097310/1‑150 (MQ=255) aaaaaTGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTg > 2:2941151/1‑150 (MQ=255) aaaaTGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTgg < 1:2819707/150‑1 (MQ=255) aaaTGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGc > 2:2249282/1‑150 (MQ=255) aaaTGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGc > 1:1991093/1‑150 (MQ=255) tGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGcaca < 1:2733001/150‑1 (MQ=255) gCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAg < 1:3557192/150‑1 (MQ=255) ccGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCCATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGc > 1:3628374/1‑150 (MQ=255) ccGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGc > 1:3628379/1‑150 (MQ=255) cgcgATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCg > 2:2057539/1‑150 (MQ=255) cgcgATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCg > 2:4421293/1‑150 (MQ=255) gcgATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCgg > 2:4508361/1‑150 (MQ=255) cgATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGa > 1:987824/1‑150 (MQ=255) gATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGaa > 2:1977015/1‑150 (MQ=255) tACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCcg < 2:2589983/150‑1 (MQ=255) aCGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCcgc > 2:814028/1‑150 (MQ=255) cGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCcgcg < 1:3323749/150‑1 (MQ=255) cGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCcgcg < 2:1838455/150‑1 (MQ=255) cGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCcgcg > 2:1867228/1‑150 (MQ=255) cACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCt < 1:251033/150‑1 (MQ=255) aCCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTa > 1:2056695/1‑150 (MQ=255) aaTCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAAt > 2:2463525/1‑150 (MQ=255) aTCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATa > 2:3834148/1‑150 (MQ=255) aTCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATa > 2:3834395/1‑150 (MQ=255) ggTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACcg < 2:585099/150‑1 (MQ=255) gtgtTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACcgc > 1:774310/1‑150 (MQ=255) gtTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGa > 1:3165583/1‑150 (MQ=255) ttGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGAt < 1:748000/150‑1 (MQ=255) tgaaGCTCAACCTGGCGAACGCTTATTTGCCAGGCGGTCAACCACAAGAAGCGGCCTATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATc < 2:3024068/147‑1 (MQ=255) tGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATc > 1:834993/1‑150 (MQ=255) gCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCa > 1:1187763/1‑150 (MQ=255) cTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAg < 2:3475462/150‑1 (MQ=255) tCAACCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAgc < 1:4532548/150‑1 (MQ=255) aaCCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAgctg > 2:3593976/1‑150 (MQ=255) aCCTGGCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAgctgg < 2:4170245/150‑1 (MQ=255) cTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAgctggct > 2:4086006/1‑150 (MQ=255) cTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAgctggct > 2:195839/1‑150 (MQ=255) ggCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTgc > 2:1118707/1‑150 (MQ=255) gCGAACGCTTATTTGCAAGGAGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTgcg > 2:3737027/1‑150 (MQ=255) gAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGcgcg > 1:3472210/1‑150 (MQ=255) gCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCa > 2:2416209/1‑150 (MQ=255) cTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAg > 1:1053606/1‑150 (MQ=255) aaGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATg > 1:587860/1‑150 (MQ=255) aGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATgc > 2:600748/1‑150 (MQ=255) aGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAAGAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATgc > 2:242459/1‑150 (MQ=255) | CTGGCAACGCATGGTATCTCGATCTGGCTACTGATATCGATCTTGGGCAAAACAAAGCCAATGAGGCGATCAATCGTCTGAAAAATGCCCGCGATTTACGCACCAATCCGGTGTTGCAGCTCAACCTGGCGAACGCTTATTTGCAAGGCGGTCAACCACAAGAAGCGGCCAATATTCTGAATCGCTACACCTTTAATAATAAAGATGACAGCAACGGCTGGGATTTGCTGGCACAGGCGGAAGCCGCGCTAAATAACCGCGATCAGGAGCTGGCTGCGCGAGCAGAAGGTTATGC > CP009273/2610471‑2610765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |