| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,671,274 | C→A | 100% | T149T (ACG→ACT) | yphE ← | putative sugar transporter subunit of ABC superfamily, ATP‑binding component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,671,274 | 0 | C | A | 95.0% | 707.5 / 24.6 | 222 | T149T (ACG→ACT) | yphE | putative sugar transporter subunit of ABC superfamily, ATP‑binding component |
| Reads supporting (aligned to +/- strand): ref base C (4/7); new base A (98/113); total (102/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 222 total aligned reads displayed.
CAGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCTT > CP009273/2671127‑2671419 | cAGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGt < 1:4400100/150‑1 (MQ=255) aGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGtt > 1:2129435/1‑150 (MQ=255) aGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGtt < 2:3043319/150‑1 (MQ=255) gTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTg < 2:1203710/150‑1 (MQ=255) gCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGaa < 2:1724200/150‑1 (MQ=255) cGACATCTTTTTCACCGCGCTGATCACCTGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCTATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAAc < 1:560138/150‑1 (MQ=255) cGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAAc < 2:1036821/150‑1 (MQ=255) gACATCTTTTTCACCGCGCTGATCTCCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCGTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa > 1:4448481/1‑150 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACa > 1:1878099/1‑150 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa > 1:3372724/1‑150 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa < 2:470849/150‑1 (MQ=255) gACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACa < 2:470507/150‑1 (MQ=255) aCATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACaa > 2:1334057/1‑150 (MQ=255) tCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAgtt < 2:4343983/150‑1 (MQ=255) ttttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAgttgtt > 1:553368/1‑150 (MQ=255) ttttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAgttgtt > 1:3717710/1‑150 (MQ=255) tttCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTc < 1:877747/150‑1 (MQ=255) gcgcTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTa < 1:1525332/150‑1 (MQ=255) cgcTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTaa < 2:2152701/150‑1 (MQ=255) cgcTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTGTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTaa < 2:3220087/150‑1 (MQ=255) gcTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAAc > 2:74620/1‑150 (MQ=255) cTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCGTCGAGTTGAAACAAGTTGTTCAGGACTCACg > 2:313423/1‑150 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAAc > 2:913148/1‑150 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc < 1:1107675/150‑1 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc < 2:2888577/150‑1 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc > 1:3975298/1‑150 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc > 1:2574429/1‑150 (MQ=255) cACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAAc < 1:2424040/150‑1 (MQ=255) aCCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACg < 2:2765721/150‑1 (MQ=255) aGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGccc > 2:3730996/1‑150 (MQ=255) aGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGccc > 2:859147/1‑150 (MQ=255) ttCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAg < 2:2052028/150‑1 (MQ=255) tCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAgc > 1:3160462/1‑150 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg > 1:2917181/1‑150 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg < 1:4491274/150‑1 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg < 2:4328078/150‑1 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg > 1:3822085/1‑150 (MQ=255) ttCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTg < 1:3558261/150‑1 (MQ=255) tCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGt < 2:1622442/150‑1 (MQ=255) tCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGt < 2:2778534/150‑1 (MQ=255) tCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGt > 2:3045556/1‑150 (MQ=255) tCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGt < 2:4524488/150‑1 (MQ=255) ccGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTTGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTa < 2:682107/150‑1 (MQ=255) cACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGc > 2:633207/1‑150 (MQ=255) tCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAAc < 2:620611/150‑1 (MQ=255) cGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACg < 1:3581397/150‑1 (MQ=255) cGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACg < 1:677822/150‑1 (MQ=255) gCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGt > 2:706138/1‑150 (MQ=255) cAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGtt > 1:4134981/1‑150 (MQ=255) aGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTgg < 1:108029/150‑1 (MQ=255) aGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTgg < 1:1446959/150‑1 (MQ=255) aaCTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCAt > 2:2253299/1‑150 (MQ=255) cTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATcc > 1:1993436/1‑150 (MQ=255) cTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATcc > 2:666138/1‑150 (MQ=255) tGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCt < 1:1605728/150‑1 (MQ=255) tGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCt < 1:1605610/150‑1 (MQ=255) tGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCt < 1:1541757/150‑1 (MQ=255) aaGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAg > 2:2911757/1‑150 (MQ=255) tGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaat < 1:1371991/150‑1 (MQ=255) tGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaat < 1:1372130/150‑1 (MQ=255) gACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaatc < 1:162015/150‑1 (MQ=255) gACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaatc < 1:162728/150‑1 (MQ=255) aCCACGCGCGGCTCGCCCTTCATCACCCGCGCAATGTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTATCGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTaatca < 2:1869222/150‑1 (MQ=255) cgcgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAatcaatca > 1:1410750/1‑150 (MQ=255) cgcgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAatcaatca > 1:1481300/1‑150 (MQ=255) cgcgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAatcaatca > 1:2211840/1‑150 (MQ=255) gcgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCAt < 2:1050663/150‑1 (MQ=255) cgcgGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATg < 2:849832/150‑1 (MQ=255) ggCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCg > 2:3755263/1‑150 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGtt < 1:1235039/150‑1 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGtt < 2:4247684/150‑1 (MQ=255) cTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGtt < 2:4246172/150‑1 (MQ=255) tCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTg < 1:2172381/150‑1 (MQ=255) cGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgc < 2:643567/150‑1 (MQ=255) gCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcg > 2:4390778/1‑150 (MQ=255) gCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcg < 2:1960253/150‑1 (MQ=255) cTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcggcg < 1:521338/150‑1 (MQ=255) cTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTgcggcg > 2:2432926/1‑150 (MQ=255) tcaCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGcc > 1:921849/1‑150 (MQ=255) aCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCAc < 2:3469361/150‑1 (MQ=255) aCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCAc < 2:3469285/150‑1 (MQ=255) aCCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCAc > 1:2031875/1‑150 (MQ=255) aaTTTCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAg < 1:2310585/150‑1 (MQ=255) aTTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAgg > 1:2981613/1‑150 (MQ=255) ttCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCa > 1:1864172/1‑150 (MQ=255) tCCACCAGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCag > 2:2002537/1‑150 (MQ=255) caccaGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCagag < 1:4357069/150‑1 (MQ=255) aGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGttt < 2:3720929/150‑1 (MQ=255) aGCTGCTTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGttt > 1:1782787/1‑150 (MQ=255) ctgctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTc < 1:2833333/150‑1 (MQ=255) gctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCg > 2:3860537/1‑150 (MQ=255) gctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCg > 2:1454368/1‑150 (MQ=255) ctTTTGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGc < 2:4503734/150‑1 (MQ=255) ttttGCGCCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGcc > 1:611238/1‑150 (MQ=255) gcgcCGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTg > 2:2534215/1‑150 (MQ=255) ccGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCa < 2:84320/150‑1 (MQ=255) cGGGCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAg > 2:906276/1‑150 (MQ=255) gggCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGc < 1:923733/150‑1 (MQ=255) ggCTTAGAGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGcc > 1:3949804/1‑150 (MQ=255) ttAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCtt > 2:3112309/1‑150 (MQ=255) | CAGTGCCGACATCTTTTTCACCGCGCTGATCACCAGTTCAACTTCCGCACTCGCAAGCGAACTGGTAGGTTCATCAAGAATGACCACGCGCGGCTCGCCCTTCATCACCCGCGCAATTTCCACCAGCTGCTTTTGCGCCGGGCTTAGCGTTGAAACAAGTTGTTCAGGACTAACGTCAACGCCCAGCGCCTGTAAGCAACGTTGGGCATCCTGCGCCATTTGCAGGTAATCAATCATGCCGTTGCGGCGGGGCCACTGACCGAGGCAGAGGTTTTCCGCCACTGTCAGCCCTT > CP009273/2671127‑2671419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |