Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,767,365 A→T 5.7% Y230F (TAT→TTT)  yfjW → CP4‑57 prophage; putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,767,3650AT 5.7% 928.3 / 31.8 281Y230F (TAT→TTT) yfjWCP4‑57 prophage; putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base A (106/158);  new base T (8/8);  total (114/167)
Fisher's exact test for biased strand distribution p-value = 4.45e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01

Only 100 of 283 total aligned reads displayed.

AACCGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGAATGTAA  >  CP009273/2767216‑2767514
                                                                                                                                                     |                                                                                                                                                     
 aCCGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTAt                                                                                                                                                      <  1:2655739/150‑1 (MQ=255)
  ccGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATc                                                                                                                                                     <  1:2159402/150‑1 (MQ=255)
   cGCTGTTATATATTTATTGTTTGCCCGTCATGCGGTAGAGATTGAGATGGATATATCTGAAGTTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCt                                                                                                                                                    <  1:4179837/150‑1 (MQ=255)
   cGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCt                                                                                                                                                    >  1:2729787/1‑150 (MQ=255)
    gCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTg                                                                                                                                                   <  2:3503481/150‑1 (MQ=255)
     cTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTgg                                                                                                                                                  >  2:1452702/1‑150 (MQ=255)
       gTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGAt                                                                                                                                                <  2:2446128/150‑1 (MQ=255)
       gTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGAt                                                                                                                                                <  2:1216832/150‑1 (MQ=255)
         tatataTTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACAACCCAACGTATCTGGAttt                                                                                                                                              >  2:3684507/1‑148 (MQ=255)
          atatatTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTTTCTGGATGTa                                                                                                                                             <  2:3115499/150‑1 (MQ=255)
           tatatTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTaa                                                                                                                                            >  1:2997967/1‑150 (MQ=255)
               tttattGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCaa                                                                                                                                        <  2:4202052/150‑1 (MQ=255)
                 tattGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCaaaa                                                                                                                                      >  1:2133536/1‑150 (MQ=255)
                       ttGACCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTa                                                                                                                                >  2:2973017/1‑150 (MQ=255)
                        tGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAg                                                                                                                               >  2:795659/1‑150 (MQ=255)
                         gCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGt                                                                                                                              >  2:1638713/1‑150 (MQ=255)
                         gCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGt                                                                                                                              <  2:496930/150‑1 (MQ=255)
                          cccGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGtt                                                                                                                             <  2:1340117/150‑1 (MQ=255)
                          cccGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGtt                                                                                                                             >  1:3238764/1‑150 (MQ=255)
                              gCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGat                                                                                                                         <  1:1322695/150‑1 (MQ=255)
                                  gCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGatatat                                                                                                                     >  1:2885049/1‑150 (MQ=255)
                                   cGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGAtatata                                                                                                                    <  2:22413/150‑1 (MQ=255)
                                   cGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGAtatata                                                                                                                    <  1:2522159/150‑1 (MQ=255)
                                    ggTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATaa                                                                                                                   <  1:1642555/150‑1 (MQ=255)
                                    ggTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATaa                                                                                                                   >  2:374366/1‑150 (MQ=255)
                                        gagaTTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTTATCAAAAATGGTAGTTTGATATATAATGAt                                                                                                               <  1:4461552/150‑1 (MQ=255)
                                         agaTTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTTTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATa                                                                                                              <  2:49075/150‑1 (MQ=255)
                                             tGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATAcaca                                                                                                          >  1:4060276/1‑150 (MQ=255)
                                                gaTGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAggg                                                                                                       >  1:3001340/1‑150 (MQ=255)
                                                   ggATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGttt                                                                                                    <  2:1514505/150‑1 (MQ=255)
                                                     atatatCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTaa                                                                                                  <  1:4121925/150‑1 (MQ=255)
                                                      tatatCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAg                                                                                                 <  1:1115951/150‑1 (MQ=255)
                                                       atatCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAgt                                                                                                <  1:2393659/150‑1 (MQ=255)
                                                          tCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTATTTTTATATATAATTATACACAGGGTTTAAttggt                                                                                             >  2:2260596/1‑150 (MQ=255)
                                                           cTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAgtggtg                                                                                            <  1:2576378/150‑1 (MQ=255)
                                                           cTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAgtggtg                                                                                            >  1:27813/1‑150 (MQ=255)
                                                             gAATGTTCAGACATCGCATTTTTAGGTGTAAAATATAATGATGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCt                                                                                          <  1:3063507/150‑1 (MQ=255)
                                                             gAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCt                                                                                          <  1:1376779/150‑1 (MQ=255)
                                                              aaGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTg                                                                                         <  1:1482950/150‑1 (MQ=255)
                                                                ggTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGat                                                                                       >  1:4412223/1‑150 (MQ=255)
                                                                  ttCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGatat                                                                                     >  1:844791/1‑150 (MQ=255)
                                                                    cAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATAttt                                                                                   <  2:337415/150‑1 (MQ=255)
                                                                     aGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTta                                                                                  >  2:4310213/1‑150 (MQ=255)
                                                                     aGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTta                                                                                  >  1:2566607/1‑150 (MQ=255)
                                                                        cATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTatat                                                                               <  1:576849/150‑1 (MQ=255)
                                                                        cATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTatat                                                                               >  1:1089548/1‑150 (MQ=255)
                                                                            gCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGtc                                                                           >  2:3644934/1‑150 (MQ=255)
                                                                             cATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGtct                                                                          >  2:2067021/1‑150 (MQ=255)
                                                                             cATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGtct                                                                          >  1:2350736/1‑150 (MQ=255)
                                                                               tatGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTcc                                                                        <  2:2332729/150‑1 (MQ=255)
                                                                                     ggTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGgttgt                                                                  >  2:2133701/1‑150 (MQ=255)
                                                                                      gtgtAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGgttgtt                                                                 <  2:663024/150‑1 (MQ=255)
                                                                                         tAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTTTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATg                                                              <  1:3945942/150‑1 (MQ=255)
                                                                                           aaaGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGcc                                                            >  1:325286/1‑150 (MQ=255)
                                                                                                 aaTGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCa                                                      >  2:248301/1‑150 (MQ=255)
                                                                                                   tGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGa                                                    >  1:673235/1‑150 (MQ=255)
                                                                                                    gAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGAt                                                   <  2:2305137/150‑1 (MQ=255)
                                                                                                     aGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGAtt                                                  >  1:3755351/1‑150 (MQ=255)
                                                                                                      ggAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGAttt                                                 >  2:389488/1‑150 (MQ=255)
                                                                                                      ggAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGAttt                                                 <  1:4310213/150‑1 (MQ=255)
                                                                                                       gAATCATTTGGGTTTTTAAATGATAAAAAAACAGACTCACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTa                                                <  1:3684507/150‑1 (MQ=255)
                                                                                                       gAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTTTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTa                                                >  2:1935713/1‑150 (MQ=255)
                                                                                                       gAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTa                                                <  1:3794777/150‑1 (MQ=255)
                                                                                                         aTCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACt                                              <  1:2155098/150‑1 (MQ=255)
                                                                                                          tCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACtt                                             >  1:965132/1‑150 (MQ=255)
                                                                                                             tttGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGc                                          <  2:1402550/150‑1 (MQ=255)
                                                                                                             tttGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGc                                          <  2:1876821/150‑1 (MQ=255)
                                                                                                              ttGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCa                                         <  1:2964966/150‑1 (MQ=255)
                                                                                                               tGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCaa                                        <  2:1578720/150‑1 (MQ=255)
                                                                                                                  gTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGt                                     <  1:419988/150‑1 (MQ=255)
                                                                                                                  gTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGt                                     <  1:419893/150‑1 (MQ=255)
                                                                                                                    ttttAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTAc                                   >  2:1744172/1‑150 (MQ=255)
                                                                                                                    ttttAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTAc                                   <  2:2060819/150‑1 (MQ=255)
                                                                                                                     tttAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTAcc                                  <  1:1007275/150‑1 (MQ=255)
                                                                                                                     tttAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTAcc                                  <  1:1007261/150‑1 (MQ=255)
                                                                                                                           tGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGa                            <  2:325286/150‑1 (MQ=255)
                                                                                                                            gATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTGTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGAt                           <  1:3701768/150‑1 (MQ=255)
                                                                                                                            gATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGAt                           <  1:2683866/150‑1 (MQ=255)
                                                                                                                            gATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGAt                           <  1:2683894/150‑1 (MQ=255)
                                                                                                                             aTAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATg                          >  2:1127000/1‑150 (MQ=255)
                                                                                                                             aTAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATg                          <  2:3936909/150‑1 (MQ=255)
                                                                                                                             aTAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATg                          <  2:2133536/150‑1 (MQ=255)
                                                                                                                             aTAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATg                          <  2:1049708/150‑1 (MQ=255)
                                                                                                                              tAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGc                         <  1:2369872/150‑1 (MQ=255)
                                                                                                                              tAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGc                         <  1:1252801/150‑1 (MQ=255)
                                                                                                                               aaaaaaaCAGACACACCAACGTTTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCt                        <  1:1604428/150‑1 (MQ=255)
                                                                                                                               aaaaaaaCAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCt                        <  2:2677770/150‑1 (MQ=255)
                                                                                                                                 aaaaaCAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTaa                      <  2:2855534/150‑1 (MQ=255)
                                                                                                                                    aaCAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTaaaaa                   >  1:102742/1‑150 (MQ=255)
                                                                                                                                      cAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAAt                 >  2:1661340/1‑150 (MQ=255)
                                                                                                                                       aGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATc                <  2:2105298/150‑1 (MQ=255)
                                                                                                                                       aGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATc                <  2:1935195/150‑1 (MQ=255)
                                                                                                                                       aGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATc                >  2:4290790/1‑150 (MQ=255)
                                                                                                                                       aGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGGTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATc                >  2:4290516/1‑150 (MQ=255)
                                                                                                                                        gACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCt               <  1:174900/150‑1 (MQ=255)
                                                                                                                                          cacacCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCttt             >  1:122626/1‑150 (MQ=255)
                                                                                                                                          cacacCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCttt             >  1:769186/1‑150 (MQ=255)
                                                                                                                                           acacCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCtttt            <  2:620549/150‑1 (MQ=255)
                                                                                                                                                aaCGTTTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGaa       >  2:4115834/1‑150 (MQ=255)
                                                                                                                                                     aTCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGAATGTaa  >  1:4521091/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AACCGCTGTTATATATTTATTGTTTGCCCGGCAGGCGGTAGAGATTGAGATGGATATATCTGAAGGTTCAGACATCGCATATGTAGGTGTAAAAGATAATGAGGAATCATTTGGGTTTTTAAATGATAAAAAAACAGACACACCAACGTATCTGGATGTAATCAAAAATGGTAGTTTGATATATAATGATACACAGGGTTTAAGTGGTGCTGATATTTATATTGTCTCCGGTTGTTATGCCCTTCCAGATTTACTTCGCAATGTACCGCTTGATGCTAAAAAATCTTTTCTGAATGTAA  >  CP009273/2767216‑2767514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: