| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,840,562 | C→A | 58.5% | V70V (GTG→GTT) | hycD ← | hydrogenase 3, membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,840,562 | 0 | C | A | 58.5% | 56.1 / inf | 256 | V70V (GTG→GTT) | hycD | hydrogenase 3, membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (67/39); new base A (83/67); total (150/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.77e-01 | |||||||||||
Only 100 of 257 total aligned reads displayed.
CTACCGGTATCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCGGGTTATAC > CP009273/2840413‑2840707 | cTACCGGTATCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATc < 2:2242260/150‑1 (MQ=255) cGGTATCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACAt < 1:2580537/150‑1 (MQ=255) ggTATCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTAGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATa > 2:3642373/1‑150 (MQ=255) aTCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCCGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACgg < 1:4461918/150‑1 (MQ=255) aTCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACgg < 2:4049142/150‑1 (MQ=255) aTCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGAAGCCCACCATCACATACgg > 2:673314/1‑150 (MQ=255) tCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACAGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGc > 2:1632378/1‑150 (MQ=255) accagaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAg > 1:2162830/1‑150 (MQ=255) ccagaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAgg < 1:359753/150‑1 (MQ=255) cagaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGc > 2:4073313/1‑150 (MQ=255) cagaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGc > 1:2133635/1‑150 (MQ=255) cagaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGc > 2:2302134/1‑150 (MQ=255) agaAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCg < 2:128717/150‑1 (MQ=255) aaaTGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGa > 2:3704240/1‑150 (MQ=255) tGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAaca > 1:1787883/1‑150 (MQ=255) tGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAaca > 1:2631530/1‑150 (MQ=255) tGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAaca > 2:1947150/1‑150 (MQ=255) ggCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACTCCCACCATAACATACGGCGTCAGGCGGAacac > 2:206552/1‑150 (MQ=255) aaaGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCa < 1:1870853/150‑1 (MQ=255) aaaGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCa < 1:4123590/150‑1 (MQ=255) gaagaaACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGcc > 1:3989835/1‑150 (MQ=255) gaaACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTTCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGa > 1:3167599/1‑150 (MQ=255) cgcgcgATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCa > 1:505253/1‑150 (MQ=255) gcgcgAGGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCAt < 2:4342590/150‑1 (MQ=255) cgATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCg > 1:64386/1‑150 (MQ=255) cgATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCg < 1:1766837/150‑1 (MQ=255) aTGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCggg < 1:1366402/150‑1 (MQ=255) ggCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGcc < 2:3370686/150‑1 (MQ=255) ggCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGcc > 2:1374751/1‑150 (MQ=255) ggCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGcc < 1:2369407/150‑1 (MQ=255) ggCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGcc < 1:3765942/150‑1 (MQ=255) aaaGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGAc > 2:1890235/1‑150 (MQ=255) agagATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGc > 1:3181869/1‑150 (MQ=255) gagaTACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGct > 1:756513/1‑150 (MQ=255) aTACAGTAAGGTGATCAACTCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTg < 1:2849101/150‑1 (MQ=255) tACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGa > 2:1715212/1‑150 (MQ=255) gttaGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACTGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGcc < 2:2755692/147‑1 (MQ=255) aaGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGcccc > 1:3091286/1‑150 (MQ=255) aGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCca > 1:2259637/1‑150 (MQ=255) ggTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCcag < 2:65483/150‑1 (MQ=255) gTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCcagc < 1:719740/150‑1 (MQ=255) gATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCcagcag > 1:4132846/1‑150 (MQ=255) aTCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGt > 1:890724/1‑150 (MQ=255) cAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGttt > 1:388129/1‑150 (MQ=255) cAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGttt > 1:387976/1‑150 (MQ=255) aaaTCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTg > 2:287952/1‑150 (MQ=255) aaaTCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTg > 1:1965792/1‑150 (MQ=255) aaaTCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTg > 2:580994/1‑150 (MQ=255) aaaTCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTg < 2:2910449/150‑1 (MQ=255) tCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATa < 2:516546/150‑1 (MQ=255) tCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATa < 1:36632/150‑1 (MQ=255) tCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATa < 1:53663/150‑1 (MQ=255) cACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATaa > 2:2668599/1‑150 (MQ=255) cACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATaa > 1:3775188/1‑150 (MQ=255) cACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATaa < 1:4333528/150‑1 (MQ=255) cccAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATg > 2:3231114/1‑150 (MQ=255) ccAGTTTCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGt < 2:3167599/150‑1 (MQ=255) ccAGTTTCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGt < 2:2517268/150‑1 (MQ=255) ccAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGt < 1:3308484/150‑1 (MQ=255) aGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTcg > 1:3538854/1‑150 (MQ=255) aGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTcg > 1:3147272/1‑150 (MQ=255) aGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTcg < 1:3002157/150‑1 (MQ=255) ggCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATAc > 2:4523338/1‑150 (MQ=255) gCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACt > 1:3869902/1‑150 (MQ=255) aGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCTGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTcc < 2:4076427/150‑1 (MQ=255) ggAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGc > 1:3756378/1‑150 (MQ=255) ggAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTTATAATGTCGCGATACACCTGc > 1:1745984/1‑150 (MQ=255) ggAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGc < 2:2096409/150‑1 (MQ=255) gaACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAac > 1:3028682/1‑150 (MQ=255) aCCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAacac < 2:1653795/150‑1 (MQ=255) aCCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAacac < 2:1653468/150‑1 (MQ=255) ccGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGAGGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACg < 1:4412235/150‑1 (MQ=255) cGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgc > 2:3902485/1‑150 (MQ=255) aCGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgccc < 2:3091374/150‑1 (MQ=255) aCGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgccc < 2:3091140/150‑1 (MQ=255) cGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgcccg < 1:2668106/150‑1 (MQ=255) caccacCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgcccggccc < 2:3488026/150‑1 (MQ=255) accaccGGCTGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGGCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTGTGATAATGTCGCGATACTCCTGCACCACgcccggcccg > 2:221231/1‑150 (MQ=255) accaccGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACgcccggcccg > 1:1168866/1‑150 (MQ=255) ccaccGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCcgc > 1:1213066/1‑150 (MQ=255) caccGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCcgcg < 2:1023789/150‑1 (MQ=255) caccGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCcgcg < 2:506477/150‑1 (MQ=255) caccGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCcgcg < 1:403532/150‑1 (MQ=255) accGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGa > 1:2820339/1‑150 (MQ=255) cgcAGTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATg < 2:1627454/150‑1 (MQ=255) cAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCa < 1:1606378/150‑1 (MQ=255) gTAGCGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAg < 1:2504212/150‑1 (MQ=255) cGATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCggg > 2:2991948/1‑150 (MQ=255) gATAGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGgc > 1:4087396/1‑150 (MQ=255) aGTCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGGTATGCAAGCGGgcgcg > 2:4208234/1‑150 (MQ=255) tCAGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGgcgcgcg > 2:489983/1‑150 (MQ=255) aGCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGcc > 1:1879290/1‑150 (MQ=255) gCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCa < 1:312439/150‑1 (MQ=255) gCATGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCa < 1:1044309/150‑1 (MQ=255) tGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCAcgc > 1:4306667/1‑150 (MQ=255) tGACGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCAcgc > 1:4306522/1‑150 (MQ=255) aCGCCCACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCgg < 2:2553889/150‑1 (MQ=255) cccACCATAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCGGGtt < 1:3231114/150‑1 (MQ=255) ccaccaTCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCGGGTta < 1:1546515/150‑1 (MQ=255) ccaTAACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCGGGTTATAc > 1:30367/1‑150 (MQ=255) | CTACCGGTATCCAGACCAGAAATGGCAAAGAAGAAACGCGCGATGGCAAAGAGATACAGTAAGGTGATCAAATCACCCAGTTGCGGCAGCGGAGAACCGACGGTCACCACCGGCAGCGCAGTAGCGATAGTCAGCATGACGCCCACCATCACATACGGCGTCAGGCGGAACACCCAGCCGGAGGCATCCGGGCCGACGCTCTGACGCCCCAGCAGTTTGATAATGTCGCGATACTCCTGCAACACGCCCGGCCCGCGACGGTTATGCAAGCGGGCGCGCGCCACGCGGGTTATAC > CP009273/2840413‑2840707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |